RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 CAMK2N1Q7Z7J9 78 aa5.35□□□□□ -1.55
COL25A1-208ENST00000610288 EYSQ5T1H1 3165 aa5.34□□□□□ -1.55
COL25A1-208ENST00000610288 KRTAP10-1P60331 282 aa5.34□□□□□ -1.55
COL25A1-208ENST00000610288 Q5VSD8 79 aa5.34□□□□□ -1.55
COL25A1-208ENST00000610288 A8MUU9 505 aa5.34□□□□□ -1.55
COL25A1-208ENST00000610288 PANO1I0J062 215 aa5.34□□□□□ -1.55
COL25A1-208ENST00000610288 KRTAP10-2P60368 255 aa5.33□□□□□ -1.56
COL25A1-208ENST00000610288 C20orf166-AS1Q96NR2 134 aa5.33□□□□□ -1.56
COL25A1-208ENST00000610288 KRTAP7-1Q8IUC3 87 aa5.33□□□□□ -1.56
COL25A1-208ENST00000610288 NOTCH2NLQ7Z3S9 236 aa5.32□□□□□ -1.56
COL25A1-208ENST00000610288 LRBAP50851 2863 aa5.32□□□□□ -1.56
COL25A1-208ENST00000610288 DCHS2Q6V1P9 2916 aa5.32□□□□□ -1.56
COL25A1-208ENST00000610288 ZANQ9Y493 2812 aa5.3□□□□□ -1.56
COL25A1-208ENST00000610288 S4R3F8 94 aa5.3□□□□□ -1.56
COL25A1-208ENST00000610288 KRTAP11-1Q8IUC1 163 aa5.27□□□□□ -1.57
COL25A1-208ENST00000610288 CFAP47Q6ZTR5 3102 aa5.26□□□□□ -1.57
COL25A1-208ENST00000610288 TNRC18O15417 2968 aaPredicted RBP5.24□□□□□ -1.57
COL25A1-208ENST00000610288 NF1P21359 2839 aa5.24□□□□□ -1.57
COL25A1-208ENST00000610288 KRTAP21-3Q3LHN1 58 aa5.24□□□□□ -1.57
COL25A1-208ENST00000610288 KRTAP13-1Q8IUC0 172 aa5.24□□□□□ -1.57
COL25A1-208ENST00000610288 TENM1Q9UKZ4 2725 aa5.23□□□□□ -1.57
COL25A1-208ENST00000610288 PKD1L1Q8TDX9 2849 aa5.23□□□□□ -1.57
COL25A1-208ENST00000610288 R4GN34 69 aa5.23□□□□□ -1.57
COL25A1-208ENST00000610288 DMXL1Q9Y485 3027 aa5.22□□□□□ -1.57
COL25A1-208ENST00000610288 TENM2Q9NT68 2774 aa5.22□□□□□ -1.57
COL25A1-208ENST00000610288 DNAH14Q0VDD8 3507 aa5.18□□□□□ -1.58
COL25A1-208ENST00000610288 Q6ZRN7 208 aaPredicted RBP5.17□□□□□ -1.58
COL25A1-208ENST00000610288 SPEGQ15772 3267 aa5.14□□□□□ -1.59
COL25A1-208ENST00000610288 M0QZ58 72 aa5.13□□□□□ -1.59
COL25A1-208ENST00000610288 RPS29P62273 56 aaKnown RBP5.13□□□□□ -1.59
COL25A1-208ENST00000610288 PLAC4Q8WY50 150 aa5.11□□□□□ -1.59
COL25A1-208ENST00000610288 FBN2P35556 2912 aa5.09□□□□□ -1.59
COL25A1-208ENST00000610288 MXRA5Q9NR99 2828 aa5.09□□□□□ -1.6
COL25A1-208ENST00000610288 KRTAP13-2Q52LG2 175 aa5.08□□□□□ -1.6
COL25A1-208ENST00000610288 DCHS1Q96JQ0 3298 aa5.07□□□□□ -1.6
COL25A1-208ENST00000610288 SRRM2Q9UQ35 2752 aaKnown RBP5.06□□□□□ -1.6
COL25A1-208ENST00000610288 VWFP04275 2813 aa5.05□□□□□ -1.6
COL25A1-208ENST00000610288 MYO15AQ9UKN7 3530 aa5.05□□□□□ -1.6
COL25A1-208ENST00000610288 H0YAA0 97 aa5.03□□□□□ -1.6
COL25A1-208ENST00000610288 P0C880 135 aa5.02□□□□□ -1.61
COL25A1-208ENST00000610288 HRNRQ86YZ3 2850 aaPredicted RBP5.01□□□□□ -1.61
COL25A1-208ENST00000610288 LOC400499M0QZD8 3231 aa4.99□□□□□ -1.61
COL25A1-208ENST00000610288 C10orf95Q9H7T3 257 aa4.98□□□□□ -1.61
COL25A1-208ENST00000610288 PP632Q6XCG6 107 aa4.95□□□□□ -1.62
COL25A1-208ENST00000610288 WDFY3Q8IZQ1 3526 aa4.94□□□□□ -1.62
COL25A1-208ENST00000610288 CELSR1Q9NYQ6 3014 aa4.91□□□□□ -1.62
COL25A1-208ENST00000610288 TGP01266 2768 aa4.9□□□□□ -1.62
COL25A1-208ENST00000610288 KRTAP13-3Q3SY46 172 aa4.9□□□□□ -1.63
COL25A1-208ENST00000610288 FBN1P35555 2871 aaKnown RBP4.9□□□□□ -1.63
COL25A1-208ENST00000610288 SPTBN5Q9NRC6 3674 aaKnown RBP4.9□□□□□ -1.63
COL25A1-208ENST00000610288 PDZD2O15018 2839 aa4.89□□□□□ -1.63
COL25A1-208ENST00000610288 KRTAP1-4P0C5Y4 121 aa4.85□□□□□ -1.63
COL25A1-208ENST00000610288 RELNP78509 3460 aa4.79□□□□□ -1.64
COL25A1-208ENST00000610288 OTOGQ6ZRI0 2925 aa4.79□□□□□ -1.64
COL25A1-208ENST00000610288 TNP1P09430 55 aa4.78□□□□□ -1.64
COL25A1-208ENST00000610288 ZFHX3Q15911 3703 aa4.77□□□□□ -1.65
COL25A1-208ENST00000610288 XP32Q5T750 250 aa4.76□□□□□ -1.65
COL25A1-208ENST00000610288 SPENQ96T58 3664 aaKnown RBP4.74□□□□□ -1.65
COL25A1-208ENST00000610288 TPRXLQ17RH7 258 aa4.73□□□□□ -1.65
COL25A1-208ENST00000610288 KRTAP10-8P60410 259 aa4.73□□□□□ -1.65
COL25A1-208ENST00000610288 DMDP11532 3685 aa4.7□□□□□ -1.66
COL25A1-208ENST00000610288 FBN3Q75N90 2809 aa4.7□□□□□ -1.66
COL25A1-208ENST00000610288 KRTAP15-1Q3LI76 137 aa4.68□□□□□ -1.66
COL25A1-208ENST00000610288 MUC3AQ02505 3323 aa4.64□□□□□ -1.67
COL25A1-208ENST00000610288 A0A1B0GVY2 172 aa4.63□□□□□ -1.67
COL25A1-208ENST00000610288 ASPMQ8IZT6 3477 aa4.61□□□□□ -1.67
COL25A1-208ENST00000610288 LAMA5O15230 3695 aa4.6□□□□□ -1.67
COL25A1-208ENST00000610288 NBPF19A0A087WUL8 3843 aa4.58□□□□□ -1.68
COL25A1-208ENST00000610288 KRTAP12-2P59991 146 aa4.57□□□□□ -1.68
COL25A1-208ENST00000610288 COL7A1Q02388 2944 aa4.56□□□□□ -1.68
COL25A1-208ENST00000610288 KRTAP3-1Q9BYR8 98 aa4.56□□□□□ -1.68
COL25A1-208ENST00000610288 ZFHX4Q86UP3 3567 aa4.55□□□□□ -1.68
COL25A1-208ENST00000610288 INE1O15225 51 aa4.55□□□□□ -1.68
COL25A1-208ENST00000610288 KRTAP10-10P60014 251 aa4.54□□□□□ -1.68
COL25A1-208ENST00000610288 KRTAP12-1P59990 96 aa4.53□□□□□ -1.68
COL25A1-208ENST00000610288 PRO2289Q9P1D8 64 aa4.53□□□□□ -1.68
COL25A1-208ENST00000610288 CSMD1Q96PZ7 3565 aa4.5□□□□□ -1.69
COL25A1-208ENST00000610288 KRTAP13-4Q3LI77 160 aa4.48□□□□□ -1.69
COL25A1-208ENST00000610288 KRTAP10-6P60371 365 aaPredicted RBP4.47□□□□□ -1.69
COL25A1-208ENST00000610288 SMG1Q96Q15 3661 aaKnown RBP4.45□□□□□ -1.7
COL25A1-208ENST00000610288 CSMD2Q7Z408 3487 aa4.43□□□□□ -1.7
COL25A1-208ENST00000610288 MEGF8Q7Z7M0 2845 aa4.38□□□□□ -1.71
COL25A1-208ENST00000610288 CUBNO60494 3623 aa4.32□□□□□ -1.72
COL25A1-208ENST00000610288 KRTAP3-2Q9BYR7 98 aa4.32□□□□□ -1.72
COL25A1-208ENST00000610288 KRTAP3-3Q9BYR6 98 aa4.28□□□□□ -1.72
COL25A1-208ENST00000610288 SVEP1Q4LDE5 3571 aa4.26□□□□□ -1.73
COL25A1-208ENST00000610288 TRRAPQ9Y4A5 3859 aa4.25□□□□□ -1.73
COL25A1-208ENST00000610288 ANK3Q12955 4377 aaKnown RBP4.23□□□□□ -1.73
COL25A1-208ENST00000610288 KRTAP4-5Q9BYR2 181 aa4.22□□□□□ -1.73
COL25A1-208ENST00000610288 BSNQ9UPA5 3926 aa4.2□□□□□ -1.74
COL25A1-208ENST00000610288 MT1HL1P0DM35 61 aa4.18□□□□□ -1.74
COL25A1-208ENST00000610288 VPS13CQ709C8 3753 aa4.13□□□□□ -1.75
COL25A1-208ENST00000610288 KRTAP23-1A1A580 65 aa4.12□□□□□ -1.75
COL25A1-208ENST00000610288 AKAP9Q99996 3911 aa4.09□□□□□ -1.75
COL25A1-208ENST00000610288 KRTAP10-4P60372 401 aaPredicted RBP4.07□□□□□ -1.76
COL25A1-208ENST00000610288 DNHD1Q96M86 4753 aa4.04□□□□□ -1.76
COL25A1-208ENST00000610288 HUWE1Q7Z6Z7 4374 aaKnown RBP3.98□□□□□ -1.77
COL25A1-208ENST00000610288 KRTAP10-12P60413 245 aa3.93□□□□□ -1.78
COL25A1-208ENST00000610288 LORP23490 312 aaPredicted RBP3.9□□□□□ -1.78
COL25A1-208ENST00000610288 KRTAP12-3P60328 96 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms