RNA–Protein interactions for RNA: ENST00000609107.1

LINC02538-201, Transcript of long intergenic non-protein coding RNA 2538, humanhuman

TSL 2 BASIC

Gene LINC02538, Length 4,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02538-201ENST00000609107 CRIPTQ9P021 101 aa8.46□□□□□ -1.06
LINC02538-201ENST00000609107 KRTAP10-1P60331 282 aa8.45□□□□□ -1.06
LINC02538-201ENST00000609107 A8MU10 97 aa8.43□□□□□ -1.06
LINC02538-201ENST00000609107 DCHS1Q96JQ0 3298 aa8.43□□□□□ -1.06
LINC02538-201ENST00000609107 STAB2Q8WWQ8 2551 aa8.42□□□□□ -1.06
LINC02538-201ENST00000609107 A6NN06 94 aa8.39□□□□□ -1.07
LINC02538-201ENST00000609107 ASB16-AS1Q495Z4 193 aa8.37□□□□□ -1.07
LINC02538-201ENST00000609107 DMAC1Q96GE9 116 aa8.36□□□□□ -1.07
LINC02538-201ENST00000609107 SMG1Q96Q15 3661 aaKnown RBP8.34□□□□□ -1.07
LINC02538-201ENST00000609107 A0A087X002 238 aa8.34□□□□□ -1.07
LINC02538-201ENST00000609107 NOTCH2NLQ7Z3S9 236 aa8.34□□□□□ -1.07
LINC02538-201ENST00000609107 SPINK7P58062 85 aa8.31□□□□□ -1.08
LINC02538-201ENST00000609107 PDZD2O15018 2839 aa8.27□□□□□ -1.09
LINC02538-201ENST00000609107 A0A1B0GU33 70 aa8.26□□□□□ -1.09
LINC02538-201ENST00000609107 DMBT1Q9UGM3 2413 aaPredicted RBP8.24□□□□□ -1.09
LINC02538-201ENST00000609107 CSMD1Q96PZ7 3565 aa8.24□□□□□ -1.09
LINC02538-201ENST00000609107 A0A0D9SG42 100 aa8.23□□□□□ -1.09
LINC02538-201ENST00000609107 J3QL48 77 aa8.22□□□□□ -1.09
LINC02538-201ENST00000609107 TENM4Q6N022 2769 aa8.21□□□□□ -1.1
LINC02538-201ENST00000609107 TENM3Q9P273 2699 aa8.21□□□□□ -1.1
LINC02538-201ENST00000609107 KRTAP13-2Q52LG2 175 aa8.2□□□□□ -1.1
LINC02538-201ENST00000609107 CELSR1Q9NYQ6 3014 aa8.2□□□□□ -1.1
LINC02538-201ENST00000609107 CSAG1Q6PB30 78 aa8.18□□□□□ -1.1
LINC02538-201ENST00000609107 RPS29P62273 56 aaKnown RBP8.18□□□□□ -1.1
LINC02538-201ENST00000609107 LUZP6Q538Z0 58 aa8.17□□□□□ -1.1
LINC02538-201ENST00000609107 TENM1Q9UKZ4 2725 aa8.14□□□□□ -1.11
LINC02538-201ENST00000609107 ADM2Q7Z4H4 148 aa8.12□□□□□ -1.11
LINC02538-201ENST00000609107 Q6ZSA8 131 aa8.12□□□□□ -1.11
LINC02538-201ENST00000609107 BSNQ9UPA5 3926 aa8.09□□□□□ -1.12
LINC02538-201ENST00000609107 Q5VSD8 79 aa8.08□□□□□ -1.12
LINC02538-201ENST00000609107 COX6B2Q6YFQ2 88 aa8.08□□□□□ -1.12
LINC02538-201ENST00000609107 S4R3F8 94 aa8.06□□□□□ -1.12
LINC02538-201ENST00000609107 VWFP04275 2813 aa8.05□□□□□ -1.12
LINC02538-201ENST00000609107 SVEP1Q4LDE5 3571 aa8.04□□□□□ -1.12
LINC02538-201ENST00000609107 SPATA8Q6RVD6 105 aa8.04□□□□□ -1.12
LINC02538-201ENST00000609107 SPENQ96T58 3664 aaKnown RBP8.04□□□□□ -1.12
LINC02538-201ENST00000609107 OTOGQ6ZRI0 2925 aa8.01□□□□□ -1.13
LINC02538-201ENST00000609107 H1FX-AS1Q4G0G2 97 aa8□□□□□ -1.13
LINC02538-201ENST00000609107 KRTAP21-3Q3LHN1 58 aa7.98□□□□□ -1.13
LINC02538-201ENST00000609107 ANK3Q12955 4377 aaKnown RBP7.96□□□□□ -1.14
LINC02538-201ENST00000609107 A0A0A0MQY5 61 aa7.95□□□□□ -1.14
LINC02538-201ENST00000609107 KRTAP1-4P0C5Y4 121 aa7.95□□□□□ -1.14
LINC02538-201ENST00000609107 RPL37P61927 97 aaKnown RBP7.9□□□□□ -1.14
LINC02538-201ENST00000609107 NBPF19A0A087WUL8 3843 aa7.89□□□□□ -1.15
LINC02538-201ENST00000609107 CAMK2N1Q7Z7J9 78 aa7.89□□□□□ -1.15
LINC02538-201ENST00000609107 A8MUU9 505 aa7.88□□□□□ -1.15
LINC02538-201ENST00000609107 C20orf166-AS1Q96NR2 134 aa7.86□□□□□ -1.15
LINC02538-201ENST00000609107 SEC61BP60468 96 aaKnown RBP7.86□□□□□ -1.15
LINC02538-201ENST00000609107 ROMO1P60602 79 aa7.83□□□□□ -1.16
LINC02538-201ENST00000609107 KRTAP16-1A8MUX0 517 aa7.81□□□□□ -1.16
LINC02538-201ENST00000609107 FBN1P35555 2871 aaKnown RBP7.81□□□□□ -1.16
LINC02538-201ENST00000609107 R4GN34 69 aa7.77□□□□□ -1.17
LINC02538-201ENST00000609107 CSMD2Q7Z408 3487 aa7.77□□□□□ -1.17
LINC02538-201ENST00000609107 KRTAP13-3Q3SY46 172 aa7.74□□□□□ -1.17
LINC02538-201ENST00000609107 KRTAP25-1Q3LHN0 102 aa7.73□□□□□ -1.17
LINC02538-201ENST00000609107 PKD1L1Q8TDX9 2849 aa7.72□□□□□ -1.17
LINC02538-201ENST00000609107 TGP01266 2768 aa7.71□□□□□ -1.18
LINC02538-201ENST00000609107 TENM2Q9NT68 2774 aa7.69□□□□□ -1.18
LINC02538-201ENST00000609107 M0QZ58 72 aa7.67□□□□□ -1.18
LINC02538-201ENST00000609107 CUBNO60494 3623 aa7.65□□□□□ -1.19
LINC02538-201ENST00000609107 TRRAPQ9Y4A5 3859 aa7.63□□□□□ -1.19
LINC02538-201ENST00000609107 NDUFAF8A1L188 74 aa7.62□□□□□ -1.19
LINC02538-201ENST00000609107 ZFHX3Q15911 3703 aa7.6□□□□□ -1.19
LINC02538-201ENST00000609107 XP32Q5T750 250 aa7.56□□□□□ -1.2
LINC02538-201ENST00000609107 M0R2T5 61 aa7.54□□□□□ -1.2
LINC02538-201ENST00000609107 VPS13CQ709C8 3753 aa7.51□□□□□ -1.21
LINC02538-201ENST00000609107 A0A1B0GVY2 172 aa7.51□□□□□ -1.21
LINC02538-201ENST00000609107 H0YAA0 97 aa7.5□□□□□ -1.21
LINC02538-201ENST00000609107 KRTAP10-8P60410 259 aa7.42□□□□□ -1.22
LINC02538-201ENST00000609107 FBN3Q75N90 2809 aa7.4□□□□□ -1.23
LINC02538-201ENST00000609107 TPRXLQ17RH7 258 aa7.39□□□□□ -1.23
LINC02538-201ENST00000609107 ZNF469Q96JG9 3925 aaPredicted RBP7.38□□□□□ -1.23
LINC02538-201ENST00000609107 HUWE1Q7Z6Z7 4374 aaKnown RBP7.38□□□□□ -1.23
LINC02538-201ENST00000609107 MEGF8Q7Z7M0 2845 aa7.37□□□□□ -1.23
LINC02538-201ENST00000609107 SRRM2Q9UQ35 2752 aaKnown RBP7.37□□□□□ -1.23
LINC02538-201ENST00000609107 AKAP9Q99996 3911 aa7.35□□□□□ -1.23
LINC02538-201ENST00000609107 PLAC4Q8WY50 150 aa7.29□□□□□ -1.24
LINC02538-201ENST00000609107 P0C880 135 aa7.27□□□□□ -1.25
LINC02538-201ENST00000609107 KRTAP3-1Q9BYR8 98 aa7.25□□□□□ -1.25
LINC02538-201ENST00000609107 C10orf95Q9H7T3 257 aa7.16□□□□□ -1.26
LINC02538-201ENST00000609107 DNAH9Q9NYC9 4486 aa7.12□□□□□ -1.27
LINC02538-201ENST00000609107 TNP1P09430 55 aa7.09□□□□□ -1.27
LINC02538-201ENST00000609107 PP632Q6XCG6 107 aa7.06□□□□□ -1.28
LINC02538-201ENST00000609107 KRTAP10-4P60372 401 aaPredicted RBP7.04□□□□□ -1.28
LINC02538-201ENST00000609107 COL7A1Q02388 2944 aa7□□□□□ -1.29
LINC02538-201ENST00000609107 KRTAP12-2P59991 146 aa6.99□□□□□ -1.29
LINC02538-201ENST00000609107 KRTAP10-6P60371 365 aaPredicted RBP6.99□□□□□ -1.29
LINC02538-201ENST00000609107 PLECQ15149 4684 aaKnown RBP6.96□□□□□ -1.3
LINC02538-201ENST00000609107 KRTAP12-1P59990 96 aa6.94□□□□□ -1.3
LINC02538-201ENST00000609107 DNAH1Q9P2D7 4330 aa6.93□□□□□ -1.3
LINC02538-201ENST00000609107 MT1HL1P0DM35 61 aa6.92□□□□□ -1.3
LINC02538-201ENST00000609107 ALMS1Q8TCU4 4167 aa6.92□□□□□ -1.3
LINC02538-201ENST00000609107 KRTAP13-4Q3LI77 160 aa6.91□□□□□ -1.3
LINC02538-201ENST00000609107 VPS13DQ5THJ4 4388 aa6.89□□□□□ -1.31
LINC02538-201ENST00000609107 CSMD3Q7Z407 3707 aa6.86□□□□□ -1.31
LINC02538-201ENST00000609107 DNAH17Q9UFH2 4485 aa6.86□□□□□ -1.31
LINC02538-201ENST00000609107 KRTAP3-3Q9BYR6 98 aa6.86□□□□□ -1.31
LINC02538-201ENST00000609107 KRTAP15-1Q3LI76 137 aa6.85□□□□□ -1.31
LINC02538-201ENST00000609107 DNAH10Q8IVF4 4471 aa6.84□□□□□ -1.31
LINC02538-201ENST00000609107 KRTAP3-2Q9BYR7 98 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms