RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 LOC110117498A0A087WWA1 95 aa8.69□□□□□ -1.02
LINC00240-203ENST00000606878 A0A1B0GW54 56 aa8.69□□□□□ -1.02
LINC00240-203ENST00000606878 TAX1BP3O14907 124 aa8.69□□□□□ -1.02
LINC00240-203ENST00000606878 IGHV6-1A0A0B4J1U7 121 aa8.68□□□□□ -1.02
LINC00240-203ENST00000606878 A0A1W2PPM0 123 aa8.67□□□□□ -1.02
LINC00240-203ENST00000606878 J3KT08 172 aa8.67□□□□□ -1.02
LINC00240-203ENST00000606878 COX6B2Q6YFQ2 88 aa8.65□□□□□ -1.02
LINC00240-203ENST00000606878 NOTCH2NLQ7Z3S9 236 aa8.65□□□□□ -1.02
LINC00240-203ENST00000606878 C14orf132Q9NPU4 83 aa8.65□□□□□ -1.02
LINC00240-203ENST00000606878 A0A1B0GVX0 72 aa8.63□□□□□ -1.03
LINC00240-203ENST00000606878 C8orf87E5RJ46 101 aa8.63□□□□□ -1.03
LINC00240-203ENST00000606878 KRTAP16-1A8MUX0 517 aa8.62□□□□□ -1.03
LINC00240-203ENST00000606878 NDUFB1O75438 58 aa8.62□□□□□ -1.03
LINC00240-203ENST00000606878 H3BT86 120 aa8.61□□□□□ -1.03
LINC00240-203ENST00000606878 MT1HP80294 61 aa8.61□□□□□ -1.03
LINC00240-203ENST00000606878 LOC100996750A0A140TA64 210 aa8.57□□□□□ -1.04
LINC00240-203ENST00000606878 NREPQ16612 68 aa8.57□□□□□ -1.04
LINC00240-203ENST00000606878 KRTAP4-6Q9BYQ5 205 aa8.57□□□□□ -1.04
LINC00240-203ENST00000606878 SPCS1Q9Y6A9 102 aa8.57□□□□□ -1.04
LINC00240-203ENST00000606878 COL5A1-AS1Q5SY13 56 aa8.56□□□□□ -1.04
LINC00240-203ENST00000606878 MTURNQ8N3F0 131 aa8.56□□□□□ -1.04
LINC00240-203ENST00000606878 KRTAP9-2Q9BYQ4 174 aa8.56□□□□□ -1.04
LINC00240-203ENST00000606878 A8MWP4 228 aa8.54□□□□□ -1.04
LINC00240-203ENST00000606878 M0R2T5 61 aa8.53□□□□□ -1.04
LINC00240-203ENST00000606878 IGKV3D-7A0A0C4DH55 119 aa8.5□□□□□ -1.05
LINC00240-203ENST00000606878 C8orf17Q9NRJ1 99 aa8.49□□□□□ -1.05
LINC00240-203ENST00000606878 PRR15Q8IV56 129 aa8.47□□□□□ -1.05
LINC00240-203ENST00000606878 Q8N9P0 234 aaPredicted RBP8.46□□□□□ -1.06
LINC00240-203ENST00000606878 ZCCHC13Q8WW36 166 aaKnown RBP8.45□□□□□ -1.06
LINC00240-203ENST00000606878 PCP4L1A6NKN8 68 aa8.43□□□□□ -1.06
LINC00240-203ENST00000606878 K7EP34 96 aa8.43□□□□□ -1.06
LINC00240-203ENST00000606878 KRTAP10-6P60371 365 aaPredicted RBP8.43□□□□□ -1.06
LINC00240-203ENST00000606878 Q6ZVQ6 151 aa8.43□□□□□ -1.06
LINC00240-203ENST00000606878 FLGP20930 4061 aaPredicted RBP8.42□□□□□ -1.06
LINC00240-203ENST00000606878 BPY2O14599 106 aa8.41□□□□□ -1.06
LINC00240-203ENST00000606878 RBM12B-AS1Q9P1G2 102 aa8.41□□□□□ -1.06
LINC00240-203ENST00000606878 PRO0461Q9UI25 63 aa8.4□□□□□ -1.06
LINC00240-203ENST00000606878 FAM236DA0A1B0GTK5 79 aa8.39□□□□□ -1.07
LINC00240-203ENST00000606878 FAM236CP0DP71 79 aa8.39□□□□□ -1.07
LINC00240-203ENST00000606878 HRES1P13985 223 aa8.38□□□□□ -1.07
LINC00240-203ENST00000606878 GTF2H5Q6ZYL4 71 aa8.38□□□□□ -1.07
LINC00240-203ENST00000606878 K7EQZ3 153 aa8.37□□□□□ -1.07
LINC00240-203ENST00000606878 SPINK7P58062 85 aa8.37□□□□□ -1.07
LINC00240-203ENST00000606878 TMEM254Q8TBM7 123 aa8.37□□□□□ -1.07
LINC00240-203ENST00000606878 MRPL34Q9BQ48 92 aaKnown RBP8.37□□□□□ -1.07
LINC00240-203ENST00000606878 MMP24-AS1A0A0U1RRL7 71 aa8.36□□□□□ -1.07
LINC00240-203ENST00000606878 hDV103S1A0JD37 113 aa8.35□□□□□ -1.07
LINC00240-203ENST00000606878 MPLKIPQ8TAP9 179 aa8.35□□□□□ -1.07
LINC00240-203ENST00000606878 F8W1H4 67 aa8.32□□□□□ -1.08
LINC00240-203ENST00000606878 NDUFS5O43920 106 aa8.31□□□□□ -1.08
LINC00240-203ENST00000606878 UBL5Q9BZL1 73 aa8.31□□□□□ -1.08
LINC00240-203ENST00000606878 LINC00846Q9NV44 126 aa8.3□□□□□ -1.08
LINC00240-203ENST00000606878 Q8N9L7 120 aa8.27□□□□□ -1.09
LINC00240-203ENST00000606878 CASC2Q6XLA1 102 aa8.25□□□□□ -1.09
LINC00240-203ENST00000606878 WFDC13Q8IUB5 93 aa8.25□□□□□ -1.09
LINC00240-203ENST00000606878 ETDBQ3ZM63 59 aa8.24□□□□□ -1.09
LINC00240-203ENST00000606878 KRTAP9-6A0A140TA67 174 aa8.23□□□□□ -1.09
LINC00240-203ENST00000606878 HCG22E2RYF7 251 aa8.19□□□□□ -1.1
LINC00240-203ENST00000606878 Q5W150 140 aa8.17□□□□□ -1.1
LINC00240-203ENST00000606878 KRTAP9-8Q9BYQ0 159 aa8.17□□□□□ -1.1
LINC00240-203ENST00000606878 FSIP2Q5CZC0 6907 aa8.16□□□□□ -1.1
LINC00240-203ENST00000606878 CXCL6P80162 114 aa8.15□□□□□ -1.1
LINC00240-203ENST00000606878 IGKV2D-30A0A075B6S6 120 aa8.14□□□□□ -1.11
LINC00240-203ENST00000606878 IGKV2-30P06310 120 aa8.14□□□□□ -1.11
LINC00240-203ENST00000606878 CRCT1Q9UGL9 99 aa8.13□□□□□ -1.11
LINC00240-203ENST00000606878 C7orf65Q6ZTY9 151 aa8.11□□□□□ -1.11
LINC00240-203ENST00000606878 ACYP1P07311 99 aa8.09□□□□□ -1.11
LINC00240-203ENST00000606878 MT2AP02795 61 aa8.06□□□□□ -1.12
LINC00240-203ENST00000606878 H1FX-AS1Q4G0G2 97 aa8.06□□□□□ -1.12
LINC00240-203ENST00000606878 TP53AIP1Q9HCN2 124 aa8.04□□□□□ -1.12
LINC00240-203ENST00000606878 KRTAP10-10P60014 251 aa8.02□□□□□ -1.13
LINC00240-203ENST00000606878 FAM240AA0A1B0GVK7 77 aa8.01□□□□□ -1.13
LINC00240-203ENST00000606878 MT1FP04733 61 aa7.99□□□□□ -1.13
LINC00240-203ENST00000606878 C4orf26Q17RF5 130 aa7.98□□□□□ -1.13
LINC00240-203ENST00000606878 ATP5EP2Q5VTU8 51 aa7.96□□□□□ -1.14
LINC00240-203ENST00000606878 A0A1B0GV90 55 aa7.94□□□□□ -1.14
LINC00240-203ENST00000606878 KRTAP4-8Q9BYQ9 185 aa7.94□□□□□ -1.14
LINC00240-203ENST00000606878 HIST1H4AP62805 103 aaKnown RBP7.92□□□□□ -1.14
LINC00240-203ENST00000606878 KRTAP9-3Q9BYQ3 159 aa7.91□□□□□ -1.14
LINC00240-203ENST00000606878 LINC00643Q86TS7 51 aa7.88□□□□□ -1.15
LINC00240-203ENST00000606878 C1orf64Q8NEQ6 169 aa7.87□□□□□ -1.15
LINC00240-203ENST00000606878 KRTAP3-1Q9BYR8 98 aa7.85□□□□□ -1.15
LINC00240-203ENST00000606878 CYP4F30PQ9H0H9 118 aa7.85□□□□□ -1.15
LINC00240-203ENST00000606878 TRAV22A0A0B4J277 110 aa7.83□□□□□ -1.16
LINC00240-203ENST00000606878 UQCRQO14949 82 aa7.82□□□□□ -1.16
LINC00240-203ENST00000606878 LOC101927531A0A1B0GV80 90 aa7.81□□□□□ -1.16
LINC00240-203ENST00000606878 USH2AO75445 5202 aa7.8□□□□□ -1.16
LINC00240-203ENST00000606878 J3QR89 54 aa7.79□□□□□ -1.16
LINC00240-203ENST00000606878 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.78□□□□□ -1.16
LINC00240-203ENST00000606878 C5orf47Q569G3 176 aa7.78□□□□□ -1.16
LINC00240-203ENST00000606878 S4R3F8 94 aa7.78□□□□□ -1.16
LINC00240-203ENST00000606878 A0A087WVE0 104 aa7.77□□□□□ -1.17
LINC00240-203ENST00000606878 ATOX1O00244 68 aa7.76□□□□□ -1.17
LINC00240-203ENST00000606878 CSAG1Q6PB30 78 aa7.76□□□□□ -1.17
LINC00240-203ENST00000606878 H0Y9P7 68 aa7.75□□□□□ -1.17
LINC00240-203ENST00000606878 LCA10Q71F78 164 aa7.72□□□□□ -1.17
LINC00240-203ENST00000606878 SSPOA2VEC9 5147 aa7.71□□□□□ -1.18
LINC00240-203ENST00000606878 KRTAP4-12Q9BQ66 201 aa7.67□□□□□ -1.18
LINC00240-203ENST00000606878 FAM236AA0A1B0GUQ0 79 aa7.66□□□□□ -1.18
LINC00240-203ENST00000606878 FAM236BA0A1B0GV22 79 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms