RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 A0A1W2PNM2 257 aa7.63□□□□□ -1.19
CTSA-212ENST00000606394 SPRR1BP22528 89 aa7.63□□□□□ -1.19
CTSA-212ENST00000606394 C9orf153Q5TBE3 101 aa7.63□□□□□ -1.19
CTSA-212ENST00000606394 SERP2Q8N6R1 65 aa7.63□□□□□ -1.19
CTSA-212ENST00000606394 SPRR4Q96PI1 79 aa7.63□□□□□ -1.19
CTSA-212ENST00000606394 SMIM20Q8N5G0 67 aa7.62□□□□□ -1.19
CTSA-212ENST00000606394 BPY2O14599 106 aa7.61□□□□□ -1.19
CTSA-212ENST00000606394 SPAG11AQ6PDA7 123 aa7.6□□□□□ -1.19
CTSA-212ENST00000606394 SEC61BP60468 96 aaKnown RBP7.59□□□□□ -1.19
CTSA-212ENST00000606394 KRTAP13-3Q3SY46 172 aa7.58□□□□□ -1.2
CTSA-212ENST00000606394 IGFL1Q6UW32 110 aa7.58□□□□□ -1.2
CTSA-212ENST00000606394 ZNF706Q9Y5V0 76 aaPredicted RBP7.57□□□□□ -1.2
CTSA-212ENST00000606394 IGKV4-1P06312 121 aa7.56□□□□□ -1.2
CTSA-212ENST00000606394 TRAV7A0A075B6U4 112 aa7.55□□□□□ -1.2
CTSA-212ENST00000606394 KRTAP4-1Q9BYQ7 146 aa7.55□□□□□ -1.2
CTSA-212ENST00000606394 C4orf48Q5BLP8 95 aa7.52□□□□□ -1.21
CTSA-212ENST00000606394 SS18L2Q9UHA2 77 aa7.51□□□□□ -1.21
CTSA-212ENST00000606394 Q8N9L7 120 aa7.5□□□□□ -1.21
CTSA-212ENST00000606394 LINC00483Q53H64 154 aa7.49□□□□□ -1.21
CTSA-212ENST00000606394 LCE2CQ5TA81 110 aa7.49□□□□□ -1.21
CTSA-212ENST00000606394 A0A087WSZ3 146 aa7.48□□□□□ -1.21
CTSA-212ENST00000606394 SPINK1P00995 79 aa7.47□□□□□ -1.21
CTSA-212ENST00000606394 A0A0G2JQZ4 141 aa7.46□□□□□ -1.22
CTSA-212ENST00000606394 DSCR10P59022 87 aa7.46□□□□□ -1.22
CTSA-212ENST00000606394 TMEM258P61165 79 aa7.45□□□□□ -1.22
CTSA-212ENST00000606394 IGLV9-49A0A0B4J1Y8 123 aa7.44□□□□□ -1.22
CTSA-212ENST00000606394 XP32Q5T750 250 aa7.44□□□□□ -1.22
CTSA-212ENST00000606394 C20orf197Q8N268 126 aa7.44□□□□□ -1.22
CTSA-212ENST00000606394 K7EQZ3 153 aa7.43□□□□□ -1.22
CTSA-212ENST00000606394 MT1HP80294 61 aa7.43□□□□□ -1.22
CTSA-212ENST00000606394 J3KT08 172 aa7.42□□□□□ -1.22
CTSA-212ENST00000606394 KRTAP19-2Q3LHN2 52 aa7.42□□□□□ -1.22
CTSA-212ENST00000606394 HCG22E2RYF7 251 aa7.41□□□□□ -1.22
CTSA-212ENST00000606394 RPS29P62273 56 aaKnown RBP7.41□□□□□ -1.22
CTSA-212ENST00000606394 KLKP1Q107X0 134 aa7.41□□□□□ -1.22
CTSA-212ENST00000606394 LORP23490 312 aaPredicted RBP7.4□□□□□ -1.22
CTSA-212ENST00000606394 OCR1Q9BZK8 76 aa7.4□□□□□ -1.22
CTSA-212ENST00000606394 NDUFC1O43677 76 aa7.38□□□□□ -1.23
CTSA-212ENST00000606394 MOBPQ13875 183 aa7.38□□□□□ -1.23
CTSA-212ENST00000606394 CYSTM1Q9H1C7 97 aa7.38□□□□□ -1.23
CTSA-212ENST00000606394 SSBP3-AS1Q7Z2R9 100 aa7.37□□□□□ -1.23
CTSA-212ENST00000606394 LINC00472Q9H8W2 130 aa7.37□□□□□ -1.23
CTSA-212ENST00000606394 A8MWP4 228 aa7.36□□□□□ -1.23
CTSA-212ENST00000606394 KRTAP10-6P60371 365 aaPredicted RBP7.36□□□□□ -1.23
CTSA-212ENST00000606394 DEFB116Q30KQ4 102 aa7.36□□□□□ -1.23
CTSA-212ENST00000606394 TMEM254Q8TBM7 123 aa7.36□□□□□ -1.23
CTSA-212ENST00000606394 NDUFB1O75438 58 aa7.34□□□□□ -1.23
CTSA-212ENST00000606394 PRR15Q8IV56 129 aa7.34□□□□□ -1.23
CTSA-212ENST00000606394 KRTAP9-7A8MTY7 169 aa7.33□□□□□ -1.24
CTSA-212ENST00000606394 SNURFQ9Y675 71 aa7.33□□□□□ -1.24
CTSA-212ENST00000606394 FAM236DA0A1B0GTK5 79 aa7.32□□□□□ -1.24
CTSA-212ENST00000606394 FAM236CP0DP71 79 aa7.32□□□□□ -1.24
CTSA-212ENST00000606394 H7BZZ5 65 aa7.31□□□□□ -1.24
CTSA-212ENST00000606394 ATP5EP56381 51 aaPredicted RBP7.31□□□□□ -1.24
CTSA-212ENST00000606394 HRCT1Q6UXD1 115 aa7.31□□□□□ -1.24
CTSA-212ENST00000606394 CASC2Q6XLA1 102 aa7.31□□□□□ -1.24
CTSA-212ENST00000606394 WFDC13Q8IUB5 93 aa7.31□□□□□ -1.24
CTSA-212ENST00000606394 CD164Q04900 197 aa7.3□□□□□ -1.24
CTSA-212ENST00000606394 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.29□□□□□ -1.24
CTSA-212ENST00000606394 RPS28P62857 69 aaKnown RBP7.29□□□□□ -1.24
CTSA-212ENST00000606394 C5orf47Q569G3 176 aa7.29□□□□□ -1.24
CTSA-212ENST00000606394 Q96NJ1 140 aa7.29□□□□□ -1.24
CTSA-212ENST00000606394 FLGP20930 4061 aaPredicted RBP7.28□□□□□ -1.24
CTSA-212ENST00000606394 M0R2T5 61 aa7.27□□□□□ -1.25
CTSA-212ENST00000606394 PCOTHQ58A44 107 aa7.27□□□□□ -1.25
CTSA-212ENST00000606394 MMP24-AS1A0A0U1RRL7 71 aa7.26□□□□□ -1.25
CTSA-212ENST00000606394 A0A1B0GVX0 72 aa7.24□□□□□ -1.25
CTSA-212ENST00000606394 MP68P56378 58 aa7.24□□□□□ -1.25
CTSA-212ENST00000606394 hDV103S1A0JD37 113 aa7.23□□□□□ -1.25
CTSA-212ENST00000606394 H3BPC8 53 aa7.22□□□□□ -1.25
CTSA-212ENST00000606394 LIMD2Q9BT23 127 aa7.22□□□□□ -1.25
CTSA-212ENST00000606394 C8orf17Q9NRJ1 99 aa7.22□□□□□ -1.25
CTSA-212ENST00000606394 SERP1Q9Y6X1 66 aa7.22□□□□□ -1.25
CTSA-212ENST00000606394 ZCCHC13Q8WW36 166 aaKnown RBP7.2□□□□□ -1.26
CTSA-212ENST00000606394 IGHV6-1A0A0B4J1U7 121 aa7.19□□□□□ -1.26
CTSA-212ENST00000606394 TP53AIP1Q9HCN2 124 aa7.19□□□□□ -1.26
CTSA-212ENST00000606394 H0Y9P7 68 aa7.18□□□□□ -1.26
CTSA-212ENST00000606394 SSPOA2VEC9 5147 aa7.17□□□□□ -1.26
CTSA-212ENST00000606394 Q5XG85 94 aa7.17□□□□□ -1.26
CTSA-212ENST00000606394 COX6B2Q6YFQ2 88 aa7.17□□□□□ -1.26
CTSA-212ENST00000606394 USH2AO75445 5202 aa7.17□□□□□ -1.26
CTSA-212ENST00000606394 TRAV22A0A0B4J277 110 aa7.16□□□□□ -1.26
CTSA-212ENST00000606394 C8orf87E5RJ46 101 aa7.15□□□□□ -1.26
CTSA-212ENST00000606394 C9orf92A6NGG3 77 aa7.14□□□□□ -1.27
CTSA-212ENST00000606394 MRPL34Q9BQ48 92 aaKnown RBP7.14□□□□□ -1.27
CTSA-212ENST00000606394 LINC00208Q96KT6 92 aa7.13□□□□□ -1.27
CTSA-212ENST00000606394 NDUFS5O43920 106 aa7.11□□□□□ -1.27
CTSA-212ENST00000606394 C1orf64Q8NEQ6 169 aa7.1□□□□□ -1.27
CTSA-212ENST00000606394 FCGBPQ9Y6R7 5405 aaPredicted RBP7.1□□□□□ -1.27
CTSA-212ENST00000606394 RPL37P61927 97 aaKnown RBP7.07□□□□□ -1.28
CTSA-212ENST00000606394 C1orf195Q5TG92 126 aa7.07□□□□□ -1.28
CTSA-212ENST00000606394 CYP4F30PQ9H0H9 118 aa7.07□□□□□ -1.28
CTSA-212ENST00000606394 SMIM26A0A096LP01 95 aa7.06□□□□□ -1.28
CTSA-212ENST00000606394 SPANXA2-OT1Q8N9U9 137 aa7.06□□□□□ -1.28
CTSA-212ENST00000606394 LINC00313P59037 77 aa7.04□□□□□ -1.28
CTSA-212ENST00000606394 NOTCH2NLQ7Z3S9 236 aa7.04□□□□□ -1.28
CTSA-212ENST00000606394 LOC101927531A0A1B0GV80 90 aa7□□□□□ -1.29
CTSA-212ENST00000606394 Q8N9P0 234 aaPredicted RBP6.97□□□□□ -1.29
CTSA-212ENST00000606394 KRTAP9-8Q9BYQ0 159 aa6.97□□□□□ -1.29
CTSA-212ENST00000606394 SYNE2Q8WXH0 6885 aaKnown RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms