RNA–Protein interactions for RNA: ENST00000604724.5

LINC01235-201, Transcript of long intergenic non-protein coding RNA 1235, humanhuman

TSL 2 BASIC

Gene LINC01235, Length 2,328 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01235-201ENST00000604724 APOBP04114 4563 aaKnown RBP6.41□□□□□ -1.38
LINC01235-201ENST00000604724 HCG22E2RYF7 251 aa6.39□□□□□ -1.39
LINC01235-201ENST00000604724 FAT1Q14517 4588 aa6.39□□□□□ -1.39
LINC01235-201ENST00000604724 ATP5EP56381 51 aaPredicted RBP6.38□□□□□ -1.39
LINC01235-201ENST00000604724 A8MWP4 228 aa6.38□□□□□ -1.39
LINC01235-201ENST00000604724 WFDC13Q8IUB5 93 aa6.38□□□□□ -1.39
LINC01235-201ENST00000604724 KRTAP13-2Q52LG2 175 aa6.37□□□□□ -1.39
LINC01235-201ENST00000604724 KRTAP1-4P0C5Y4 121 aa6.37□□□□□ -1.39
LINC01235-201ENST00000604724 SNURFQ9Y675 71 aa6.37□□□□□ -1.39
LINC01235-201ENST00000604724 NDUFS5O43920 106 aa6.36□□□□□ -1.39
LINC01235-201ENST00000604724 RYR3Q15413 4870 aa6.35□□□□□ -1.39
LINC01235-201ENST00000604724 SMR3BP02814 79 aaPredicted RBP6.34□□□□□ -1.39
LINC01235-201ENST00000604724 KRTAP29-1A8MX34 341 aaPredicted RBP6.34□□□□□ -1.39
LINC01235-201ENST00000604724 KLKP1Q107X0 134 aa6.34□□□□□ -1.39
LINC01235-201ENST00000604724 SSBP3-AS1Q7Z2R9 100 aa6.33□□□□□ -1.4
LINC01235-201ENST00000604724 TMEM254Q8TBM7 123 aa6.33□□□□□ -1.4
LINC01235-201ENST00000604724 MMP24-AS1A0A0U1RRL7 71 aa6.32□□□□□ -1.4
LINC01235-201ENST00000604724 FAM229BQ4G0N7 80 aa6.32□□□□□ -1.4
LINC01235-201ENST00000604724 CASC2Q6XLA1 102 aa6.32□□□□□ -1.4
LINC01235-201ENST00000604724 NDUFC1O43677 76 aa6.31□□□□□ -1.4
LINC01235-201ENST00000604724 NDUFB1O75438 58 aa6.3□□□□□ -1.4
LINC01235-201ENST00000604724 SPINK6Q6UWN8 80 aa6.3□□□□□ -1.4
LINC01235-201ENST00000604724 A8MUN3 132 aa6.29□□□□□ -1.4
LINC01235-201ENST00000604724 PLA2G1BP04054 148 aaKnown RBP6.29□□□□□ -1.4
LINC01235-201ENST00000604724 IGHV6-1A0A0B4J1U7 121 aa6.28□□□□□ -1.4
LINC01235-201ENST00000604724 A0A1B0GVX0 72 aa6.28□□□□□ -1.4
LINC01235-201ENST00000604724 NOTCH2NLQ7Z3S9 236 aa6.27□□□□□ -1.41
LINC01235-201ENST00000604724 hDV103S1A0JD37 113 aa6.27□□□□□ -1.41
LINC01235-201ENST00000604724 LCA10Q71F78 164 aa6.27□□□□□ -1.41
LINC01235-201ENST00000604724 KRTAP10-4P60372 401 aaPredicted RBP6.26□□□□□ -1.41
LINC01235-201ENST00000604724 C8orf17Q9NRJ1 99 aa6.26□□□□□ -1.41
LINC01235-201ENST00000604724 A0A0A0MQY5 61 aa6.25□□□□□ -1.41
LINC01235-201ENST00000604724 CDK2AP2O75956 126 aa6.25□□□□□ -1.41
LINC01235-201ENST00000604724 ASB16-AS1Q495Z4 193 aa6.25□□□□□ -1.41
LINC01235-201ENST00000604724 Q1T7F1 81 aa6.24□□□□□ -1.41
LINC01235-201ENST00000604724 TYMSOSQ8TAI1 123 aa6.24□□□□□ -1.41
LINC01235-201ENST00000604724 ZCCHC13Q8WW36 166 aaKnown RBP6.22□□□□□ -1.41
LINC01235-201ENST00000604724 HSPG2P98160 4391 aa6.21□□□□□ -1.41
LINC01235-201ENST00000604724 C7orf65Q6ZTY9 151 aa6.2□□□□□ -1.42
LINC01235-201ENST00000604724 H0Y9P7 68 aa6.19□□□□□ -1.42
LINC01235-201ENST00000604724 PKHD1L1Q86WI1 4243 aa6.19□□□□□ -1.42
LINC01235-201ENST00000604724 MRPL34Q9BQ48 92 aaKnown RBP6.19□□□□□ -1.42
LINC01235-201ENST00000604724 MP68P56378 58 aa6.18□□□□□ -1.42
LINC01235-201ENST00000604724 LINC00208Q96KT6 92 aa6.18□□□□□ -1.42
LINC01235-201ENST00000604724 LIMD2Q9BT23 127 aa6.17□□□□□ -1.42
LINC01235-201ENST00000604724 LINC00313P59037 77 aa6.17□□□□□ -1.42
LINC01235-201ENST00000604724 TRAV22A0A0B4J277 110 aa6.16□□□□□ -1.42
LINC01235-201ENST00000604724 A6NN06 94 aa6.16□□□□□ -1.42
LINC01235-201ENST00000604724 ATP11AUNQ6ZP68 121 aa6.16□□□□□ -1.42
LINC01235-201ENST00000604724 SPINK1P00995 79 aa6.16□□□□□ -1.42
LINC01235-201ENST00000604724 PSPHP1O15172 72 aa6.15□□□□□ -1.42
LINC01235-201ENST00000604724 LINC00304Q8N9R0 145 aa6.15□□□□□ -1.42
LINC01235-201ENST00000604724 LRP1Q07954 4544 aaKnown RBP6.15□□□□□ -1.43
LINC01235-201ENST00000604724 TP53AIP1Q9HCN2 124 aa6.14□□□□□ -1.43
LINC01235-201ENST00000604724 SPTSSBQ8NFR3 76 aa6.14□□□□□ -1.43
LINC01235-201ENST00000604724 A8MU10 97 aa6.13□□□□□ -1.43
LINC01235-201ENST00000604724 C1orf64Q8NEQ6 169 aa6.13□□□□□ -1.43
LINC01235-201ENST00000604724 RYR1P21817 5038 aa6.12□□□□□ -1.43
LINC01235-201ENST00000604724 EPPK1P58107 5090 aaKnown RBP6.11□□□□□ -1.43
LINC01235-201ENST00000604724 KIAA1109Q2LD37 5005 aa6.11□□□□□ -1.43
LINC01235-201ENST00000604724 H3BPC8 53 aa6.11□□□□□ -1.43
LINC01235-201ENST00000604724 LINC01554Q52M75 96 aa6.11□□□□□ -1.43
LINC01235-201ENST00000604724 Q5W150 140 aa6.1□□□□□ -1.43
LINC01235-201ENST00000604724 KRTAP17-1Q9BYP8 105 aa6.1□□□□□ -1.43
LINC01235-201ENST00000604724 KRTAP16-1A8MUX0 517 aa6.09□□□□□ -1.43
LINC01235-201ENST00000604724 FAM229AH3BQW9 127 aa6.09□□□□□ -1.43
LINC01235-201ENST00000604724 PRR4Q16378 134 aa6.09□□□□□ -1.43
LINC01235-201ENST00000604724 Q5VSD8 79 aa6.09□□□□□ -1.43
LINC01235-201ENST00000604724 RPS29P62273 56 aaKnown RBP6.09□□□□□ -1.43
LINC01235-201ENST00000604724 SPAG11AQ6PDA7 123 aa6.09□□□□□ -1.43
LINC01235-201ENST00000604724 TNXBP22105 4242 aa6.09□□□□□ -1.44
LINC01235-201ENST00000604724 KRTAP13-3Q3SY46 172 aa6.08□□□□□ -1.44
LINC01235-201ENST00000604724 J3QL48 77 aa6.07□□□□□ -1.44
LINC01235-201ENST00000604724 Q8N9P0 234 aaPredicted RBP6.07□□□□□ -1.44
LINC01235-201ENST00000604724 PCOTHQ58A44 107 aa6.05□□□□□ -1.44
LINC01235-201ENST00000604724 Q5VV11 94 aa6.04□□□□□ -1.44
LINC01235-201ENST00000604724 MYCBP2O75592 4640 aa6.04□□□□□ -1.44
LINC01235-201ENST00000604724 RETNLBQ9BQ08 111 aa6.04□□□□□ -1.44
LINC01235-201ENST00000604724 FAT3Q8TDW7 4589 aa6.03□□□□□ -1.44
LINC01235-201ENST00000604724 CHKB-CPT1BH3BT56 60 aa6.03□□□□□ -1.44
LINC01235-201ENST00000604724 FLG2Q5D862 2391 aaPredicted RBP6.03□□□□□ -1.44
LINC01235-201ENST00000604724 CYP4F30PQ9H0H9 118 aa6.02□□□□□ -1.45
LINC01235-201ENST00000604724 Q8N1X5 172 aa6.01□□□□□ -1.45
LINC01235-201ENST00000604724 SPANXA2-OT1Q8N9U9 137 aa6.01□□□□□ -1.45
LINC01235-201ENST00000604724 LOC101927531A0A1B0GV80 90 aa5.99□□□□□ -1.45
LINC01235-201ENST00000604724 KRTAP10-8P60410 259 aa5.99□□□□□ -1.45
LINC01235-201ENST00000604724 C9orf92A6NGG3 77 aa5.98□□□□□ -1.45
LINC01235-201ENST00000604724 IGLV7-46A0A075B6I9 117 aa5.97□□□□□ -1.45
LINC01235-201ENST00000604724 CDC42SE1Q9NRR8 79 aa5.95□□□□□ -1.46
LINC01235-201ENST00000604724 IGKV2-30P06310 120 aa5.93□□□□□ -1.46
LINC01235-201ENST00000604724 A6NED7 52 aa5.93□□□□□ -1.46
LINC01235-201ENST00000604724 DMBT1Q9UGM3 2413 aaPredicted RBP5.93□□□□□ -1.46
LINC01235-201ENST00000604724 PRAC1Q96KF2 57 aa5.92□□□□□ -1.46
LINC01235-201ENST00000604724 IGKV2D-30A0A075B6S6 120 aa5.91□□□□□ -1.46
LINC01235-201ENST00000604724 Q75L30 129 aa5.91□□□□□ -1.46
LINC01235-201ENST00000604724 HRES1P13985 223 aa5.9□□□□□ -1.46
LINC01235-201ENST00000604724 LCE2BO14633 110 aa5.9□□□□□ -1.47
LINC01235-201ENST00000604724 MT1HL1P0DM35 61 aa5.9□□□□□ -1.47
LINC01235-201ENST00000604724 PRR15LQ9BU68 103 aa5.9□□□□□ -1.47
LINC01235-201ENST00000604724 C20orf166-AS1Q96NR2 134 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms