RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 SPINK6Q6UWN8 80 aa8.84□□□□□ -0.99
CCDC12-211ENST00000604367 MMP24-AS1A0A0U1RRL7 71 aa8.83□□□□□ -1
CCDC12-211ENST00000604367 KRTAP13-2Q52LG2 175 aa8.83□□□□□ -1
CCDC12-211ENST00000604367 IGHV6-1A0A0B4J1U7 121 aa8.82□□□□□ -1
CCDC12-211ENST00000604367 RYR3Q15413 4870 aa8.82□□□□□ -1
CCDC12-211ENST00000604367 CDK2AP2O75956 126 aa8.82□□□□□ -1
CCDC12-211ENST00000604367 RBM12B-AS1Q9P1G2 102 aa8.82□□□□□ -1
CCDC12-211ENST00000604367 NDUFC1O43677 76 aa8.81□□□□□ -1
CCDC12-211ENST00000604367 PRR26Q8N8Z3 221 aa8.81□□□□□ -1
CCDC12-211ENST00000604367 hDV103S1A0JD37 113 aa8.8□□□□□ -1
CCDC12-211ENST00000604367 SMR3BP02814 79 aaPredicted RBP8.8□□□□□ -1
CCDC12-211ENST00000604367 KRTAP1-4P0C5Y4 121 aa8.8□□□□□ -1
CCDC12-211ENST00000604367 A0A1B0GVY2 172 aa8.8□□□□□ -1
CCDC12-211ENST00000604367 A0A1B0GVX0 72 aa8.79□□□□□ -1
CCDC12-211ENST00000604367 MPLKIPQ8TAP9 179 aa8.79□□□□□ -1
CCDC12-211ENST00000604367 FAM229BQ4G0N7 80 aa8.78□□□□□ -1
CCDC12-211ENST00000604367 C8orf17Q9NRJ1 99 aa8.78□□□□□ -1
CCDC12-211ENST00000604367 PLA2G1BP04054 148 aaKnown RBP8.77□□□□□ -1.01
CCDC12-211ENST00000604367 NOTCH2NLQ7Z3S9 236 aa8.75□□□□□ -1.01
CCDC12-211ENST00000604367 MP68P56378 58 aa8.74□□□□□ -1.01
CCDC12-211ENST00000604367 FAT1Q14517 4588 aa8.74□□□□□ -1.01
CCDC12-211ENST00000604367 APOBP04114 4563 aaKnown RBP8.73□□□□□ -1.01
CCDC12-211ENST00000604367 ZCCHC13Q8WW36 166 aaKnown RBP8.73□□□□□ -1.01
CCDC12-211ENST00000604367 H0Y9P7 68 aa8.72□□□□□ -1.01
CCDC12-211ENST00000604367 LINC00208Q96KT6 92 aa8.72□□□□□ -1.01
CCDC12-211ENST00000604367 ASB16-AS1Q495Z4 193 aa8.72□□□□□ -1.01
CCDC12-211ENST00000604367 NDUFS5O43920 106 aa8.71□□□□□ -1.01
CCDC12-211ENST00000604367 C8orf87E5RJ46 101 aa8.7□□□□□ -1.02
CCDC12-211ENST00000604367 TYMSOSQ8TAI1 123 aa8.7□□□□□ -1.02
CCDC12-211ENST00000604367 MRPL34Q9BQ48 92 aaKnown RBP8.68□□□□□ -1.02
CCDC12-211ENST00000604367 TRAV22A0A0B4J277 110 aa8.66□□□□□ -1.02
CCDC12-211ENST00000604367 KTN1-AS1Q86SY8 53 aa8.65□□□□□ -1.02
CCDC12-211ENST00000604367 ATP5EP56381 51 aaPredicted RBP8.65□□□□□ -1.02
CCDC12-211ENST00000604367 TP53AIP1Q9HCN2 124 aa8.64□□□□□ -1.03
CCDC12-211ENST00000604367 C1orf64Q8NEQ6 169 aa8.64□□□□□ -1.03
CCDC12-211ENST00000604367 PRR4Q16378 134 aa8.63□□□□□ -1.03
CCDC12-211ENST00000604367 LIMD2Q9BT23 127 aa8.63□□□□□ -1.03
CCDC12-211ENST00000604367 H3BPC8 53 aa8.61□□□□□ -1.03
CCDC12-211ENST00000604367 KRTAP10-4P60372 401 aaPredicted RBP8.6□□□□□ -1.03
CCDC12-211ENST00000604367 SPINK1P00995 79 aa8.59□□□□□ -1.03
CCDC12-211ENST00000604367 LINC00313P59037 77 aa8.59□□□□□ -1.03
CCDC12-211ENST00000604367 LINC00304Q8N9R0 145 aa8.58□□□□□ -1.04
CCDC12-211ENST00000604367 PCOTHQ58A44 107 aa8.54□□□□□ -1.04
CCDC12-211ENST00000604367 Q5W150 140 aa8.53□□□□□ -1.04
CCDC12-211ENST00000604367 A8MU10 97 aa8.51□□□□□ -1.05
CCDC12-211ENST00000604367 RETNLBQ9BQ08 111 aa8.5□□□□□ -1.05
CCDC12-211ENST00000604367 EPPK1P58107 5090 aaKnown RBP8.49□□□□□ -1.05
CCDC12-211ENST00000604367 SPAG11AQ6PDA7 123 aa8.49□□□□□ -1.05
CCDC12-211ENST00000604367 CYP4F30PQ9H0H9 118 aa8.49□□□□□ -1.05
CCDC12-211ENST00000604367 PSPHP1O15172 72 aa8.48□□□□□ -1.05
CCDC12-211ENST00000604367 Q8N9P0 234 aaPredicted RBP8.48□□□□□ -1.05
CCDC12-211ENST00000604367 KRTAP16-1A8MUX0 517 aa8.47□□□□□ -1.05
CCDC12-211ENST00000604367 SPANXA2-OT1Q8N9U9 137 aa8.47□□□□□ -1.05
CCDC12-211ENST00000604367 Q1T7F1 81 aa8.46□□□□□ -1.06
CCDC12-211ENST00000604367 KRTAP13-3Q3SY46 172 aa8.46□□□□□ -1.06
CCDC12-211ENST00000604367 PKHD1L1Q86WI1 4243 aa8.46□□□□□ -1.06
CCDC12-211ENST00000604367 FAM229AH3BQW9 127 aa8.45□□□□□ -1.06
CCDC12-211ENST00000604367 RPS29P62273 56 aaKnown RBP8.45□□□□□ -1.06
CCDC12-211ENST00000604367 HSPG2P98160 4391 aa8.45□□□□□ -1.06
CCDC12-211ENST00000604367 A8MUN3 132 aa8.43□□□□□ -1.06
CCDC12-211ENST00000604367 LOC101927531A0A1B0GV80 90 aa8.43□□□□□ -1.06
CCDC12-211ENST00000604367 IGLV7-46A0A075B6I9 117 aa8.41□□□□□ -1.06
CCDC12-211ENST00000604367 Q5VSD8 79 aa8.41□□□□□ -1.06
CCDC12-211ENST00000604367 LRP1Q07954 4544 aaKnown RBP8.41□□□□□ -1.06
CCDC12-211ENST00000604367 A0A0A0MQY5 61 aa8.4□□□□□ -1.07
CCDC12-211ENST00000604367 LCA10Q71F78 164 aa8.39□□□□□ -1.07
CCDC12-211ENST00000604367 RYR1P21817 5038 aa8.38□□□□□ -1.07
CCDC12-211ENST00000604367 C9orf92A6NGG3 77 aa8.35□□□□□ -1.07
CCDC12-211ENST00000604367 KIAA1109Q2LD37 5005 aa8.34□□□□□ -1.07
CCDC12-211ENST00000604367 KRTAP17-1Q9BYP8 105 aa8.32□□□□□ -1.08
CCDC12-211ENST00000604367 FLG2Q5D862 2391 aaPredicted RBP8.32□□□□□ -1.08
CCDC12-211ENST00000604367 Q8N1X5 172 aa8.32□□□□□ -1.08
CCDC12-211ENST00000604367 SPTSSBQ8NFR3 76 aa8.32□□□□□ -1.08
CCDC12-211ENST00000604367 COA5Q86WW8 74 aa8.31□□□□□ -1.08
CCDC12-211ENST00000604367 TNXBP22105 4242 aa8.31□□□□□ -1.08
CCDC12-211ENST00000604367 IGKV2-30P06310 120 aa8.31□□□□□ -1.08
CCDC12-211ENST00000604367 C7orf65Q6ZTY9 151 aa8.31□□□□□ -1.08
CCDC12-211ENST00000604367 IGKV2D-30A0A075B6S6 120 aa8.3□□□□□ -1.08
CCDC12-211ENST00000604367 A6NN06 94 aa8.3□□□□□ -1.08
CCDC12-211ENST00000604367 HRES1P13985 223 aa8.29□□□□□ -1.08
CCDC12-211ENST00000604367 Q5VV11 94 aa8.29□□□□□ -1.08
CCDC12-211ENST00000604367 KRTAP10-8P60410 259 aa8.26□□□□□ -1.09
CCDC12-211ENST00000604367 FAT3Q8TDW7 4589 aa8.25□□□□□ -1.09
CCDC12-211ENST00000604367 DMBT1Q9UGM3 2413 aaPredicted RBP8.24□□□□□ -1.09
CCDC12-211ENST00000604367 ATP11AUNQ6ZP68 121 aa8.24□□□□□ -1.09
CCDC12-211ENST00000604367 MYCBP2O75592 4640 aa8.23□□□□□ -1.09
CCDC12-211ENST00000604367 CHKB-CPT1BH3BT56 60 aa8.22□□□□□ -1.09
CCDC12-211ENST00000604367 LINC01554Q52M75 96 aa8.2□□□□□ -1.1
CCDC12-211ENST00000604367 C20orf166-AS1Q96NR2 134 aa8.19□□□□□ -1.1
CCDC12-211ENST00000604367 A8MUU9 505 aa8.19□□□□□ -1.1
CCDC12-211ENST00000604367 ACYP2P14621 99 aa8.17□□□□□ -1.1
CCDC12-211ENST00000604367 DMAC1Q96GE9 116 aa8.17□□□□□ -1.1
CCDC12-211ENST00000604367 BIRC6Q9NR09 4857 aa8.14□□□□□ -1.11
CCDC12-211ENST00000604367 PRR15LQ9BU68 103 aa8.11□□□□□ -1.11
CCDC12-211ENST00000604367 MT1HL1P0DM35 61 aa8.1□□□□□ -1.11
CCDC12-211ENST00000604367 A6NED7 52 aa8.08□□□□□ -1.12
CCDC12-211ENST00000604367 Q75L30 129 aa8.07□□□□□ -1.12
CCDC12-211ENST00000604367 PRAC1Q96KF2 57 aa8.05□□□□□ -1.12
CCDC12-211ENST00000604367 CDC42SE1Q9NRR8 79 aa8.05□□□□□ -1.12
CCDC12-211ENST00000604367 KRTAP4-5Q9BYR2 181 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms