RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 ABCA13Q86UQ4 5058 aa12.83□□□□□ -0.36
PPFIA3-211ENST00000602848 UQCRQO14949 82 aa12.82□□□□□ -0.36
PPFIA3-211ENST00000602848 A0A1B0GVX0 72 aa12.81□□□□□ -0.36
PPFIA3-211ENST00000602848 PKHD1L1Q86WI1 4243 aa12.77□□□□□ -0.36
PPFIA3-211ENST00000602848 KRTAP29-1A8MX34 341 aaPredicted RBP12.77□□□□□ -0.36
PPFIA3-211ENST00000602848 C1orf195Q5TG92 126 aa12.77□□□□□ -0.36
PPFIA3-211ENST00000602848 CASC2Q6XLA1 102 aa12.77□□□□□ -0.37
PPFIA3-211ENST00000602848 MMP24-AS1A0A0U1RRL7 71 aa12.74□□□□□ -0.37
PPFIA3-211ENST00000602848 OCR1Q9BZK8 76 aa12.74□□□□□ -0.37
PPFIA3-211ENST00000602848 WFDC13Q8IUB5 93 aa12.73□□□□□ -0.37
PPFIA3-211ENST00000602848 C8orf17Q9NRJ1 99 aa12.73□□□□□ -0.37
PPFIA3-211ENST00000602848 CCDC179H3BU77 68 aa12.73□□□□□ -0.37
PPFIA3-211ENST00000602848 IGHV6-1A0A0B4J1U7 121 aa12.72□□□□□ -0.37
PPFIA3-211ENST00000602848 hDV103S1A0JD37 113 aa12.7□□□□□ -0.38
PPFIA3-211ENST00000602848 C8orf87E5RJ46 101 aa12.7□□□□□ -0.38
PPFIA3-211ENST00000602848 PCLOQ9Y6V0 5065 aa12.68□□□□□ -0.38
PPFIA3-211ENST00000602848 KRTAP10-8P60410 259 aa12.66□□□□□ -0.38
PPFIA3-211ENST00000602848 FLG2Q5D862 2391 aaPredicted RBP12.65□□□□□ -0.38
PPFIA3-211ENST00000602848 TMEM254Q8TBM7 123 aa12.64□□□□□ -0.39
PPFIA3-211ENST00000602848 LINC00313P59037 77 aa12.59□□□□□ -0.39
PPFIA3-211ENST00000602848 MRPL34Q9BQ48 92 aaKnown RBP12.59□□□□□ -0.39
PPFIA3-211ENST00000602848 C5orf47Q569G3 176 aa12.59□□□□□ -0.39
PPFIA3-211ENST00000602848 MYCBP2O75592 4640 aa12.58□□□□□ -0.39
PPFIA3-211ENST00000602848 TP53AIP1Q9HCN2 124 aa12.58□□□□□ -0.4
PPFIA3-211ENST00000602848 NOTCH2NLQ7Z3S9 236 aa12.57□□□□□ -0.4
PPFIA3-211ENST00000602848 FAT3Q8TDW7 4589 aa12.56□□□□□ -0.4
PPFIA3-211ENST00000602848 C20orf197Q8N268 126 aa12.55□□□□□ -0.4
PPFIA3-211ENST00000602848 LRP1Q07954 4544 aaKnown RBP12.55□□□□□ -0.4
PPFIA3-211ENST00000602848 KLKP1Q107X0 134 aa12.54□□□□□ -0.4
PPFIA3-211ENST00000602848 A0A0U1RQV1 116 aa12.48□□□□□ -0.41
PPFIA3-211ENST00000602848 OXTP01178 125 aa12.48□□□□□ -0.41
PPFIA3-211ENST00000602848 MP68P56378 58 aa12.48□□□□□ -0.41
PPFIA3-211ENST00000602848 H3BPC8 53 aa12.47□□□□□ -0.41
PPFIA3-211ENST00000602848 NDUFC1O43677 76 aa12.45□□□□□ -0.42
PPFIA3-211ENST00000602848 NDUFS5O43920 106 aa12.45□□□□□ -0.42
PPFIA3-211ENST00000602848 Q8N9P0 234 aaPredicted RBP12.44□□□□□ -0.42
PPFIA3-211ENST00000602848 KRTAP16-1A8MUX0 517 aa12.42□□□□□ -0.42
PPFIA3-211ENST00000602848 SNURFQ9Y675 71 aa12.42□□□□□ -0.42
PPFIA3-211ENST00000602848 TRAV22A0A0B4J277 110 aa12.41□□□□□ -0.42
PPFIA3-211ENST00000602848 H0Y9P7 68 aa12.4□□□□□ -0.42
PPFIA3-211ENST00000602848 MT1HL1P0DM35 61 aa12.4□□□□□ -0.42
PPFIA3-211ENST00000602848 CYSTM1Q9H1C7 97 aa12.4□□□□□ -0.42
PPFIA3-211ENST00000602848 ZCCHC13Q8WW36 166 aaKnown RBP12.38□□□□□ -0.43
PPFIA3-211ENST00000602848 FP248Q71RG6 208 aaPredicted RBP12.37□□□□□ -0.43
PPFIA3-211ENST00000602848 TNXBP22105 4242 aa12.36□□□□□ -0.43
PPFIA3-211ENST00000602848 TMEM258P61165 79 aa12.35□□□□□ -0.43
PPFIA3-211ENST00000602848 H7BZZ5 65 aa12.33□□□□□ -0.43
PPFIA3-211ENST00000602848 LINC00208Q96KT6 92 aa12.33□□□□□ -0.44
PPFIA3-211ENST00000602848 RETNLBQ9BQ08 111 aa12.32□□□□□ -0.44
PPFIA3-211ENST00000602848 DMBT1Q9UGM3 2413 aaPredicted RBP12.31□□□□□ -0.44
PPFIA3-211ENST00000602848 C1orf64Q8NEQ6 169 aa12.29□□□□□ -0.44
PPFIA3-211ENST00000602848 KRTAP13-3Q3SY46 172 aa12.26□□□□□ -0.45
PPFIA3-211ENST00000602848 J3QL48 77 aa12.24□□□□□ -0.45
PPFIA3-211ENST00000602848 Q5W150 140 aa12.24□□□□□ -0.45
PPFIA3-211ENST00000602848 LOC101927531A0A1B0GV80 90 aa12.22□□□□□ -0.45
PPFIA3-211ENST00000602848 C9orf92A6NGG3 77 aa12.2□□□□□ -0.46
PPFIA3-211ENST00000602848 C20orf166-AS1Q96NR2 134 aa12.2□□□□□ -0.46
PPFIA3-211ENST00000602848 A8MUU9 505 aa12.19□□□□□ -0.46
PPFIA3-211ENST00000602848 ATP5EP56381 51 aaPredicted RBP12.19□□□□□ -0.46
PPFIA3-211ENST00000602848 HERC1Q15751 4861 aa12.19□□□□□ -0.46
PPFIA3-211ENST00000602848 IGLV7-46A0A075B6I9 117 aa12.17□□□□□ -0.46
PPFIA3-211ENST00000602848 FAM236DA0A1B0GTK5 79 aa12.17□□□□□ -0.46
PPFIA3-211ENST00000602848 FAM236CP0DP71 79 aa12.17□□□□□ -0.46
PPFIA3-211ENST00000602848 Q75L30 129 aa12.1□□□□□ -0.47
PPFIA3-211ENST00000602848 SPANXA2-OT1Q8N9U9 137 aa12.1□□□□□ -0.47
PPFIA3-211ENST00000602848 CYP4F30PQ9H0H9 118 aa12.08□□□□□ -0.48
PPFIA3-211ENST00000602848 IGKV2-30P06310 120 aa12.07□□□□□ -0.48
PPFIA3-211ENST00000602848 RPS28P62857 69 aaKnown RBP12.03□□□□□ -0.48
PPFIA3-211ENST00000602848 PRR4Q16378 134 aa12.03□□□□□ -0.48
PPFIA3-211ENST00000602848 PCOTHQ58A44 107 aa12.01□□□□□ -0.49
PPFIA3-211ENST00000602848 TPRXLQ17RH7 258 aa11.97□□□□□ -0.49
PPFIA3-211ENST00000602848 SERP1Q9Y6X1 66 aa11.97□□□□□ -0.49
PPFIA3-211ENST00000602848 XP32Q5T750 250 aa11.96□□□□□ -0.5
PPFIA3-211ENST00000602848 RPL37P61927 97 aaKnown RBP11.94□□□□□ -0.5
PPFIA3-211ENST00000602848 C7orf65Q6ZTY9 151 aa11.94□□□□□ -0.5
PPFIA3-211ENST00000602848 IGKV2D-30A0A075B6S6 120 aa11.93□□□□□ -0.5
PPFIA3-211ENST00000602848 ATP11AUNQ6ZP68 121 aa11.92□□□□□ -0.5
PPFIA3-211ENST00000602848 HMCN2Q8NDA2 5059 aa11.91□□□□□ -0.5
PPFIA3-211ENST00000602848 HRES1P13985 223 aa11.87□□□□□ -0.51
PPFIA3-211ENST00000602848 SPINK7P58062 85 aa11.78□□□□□ -0.52
PPFIA3-211ENST00000602848 DMAC1Q96GE9 116 aa11.74□□□□□ -0.53
PPFIA3-211ENST00000602848 ACYP2P14621 99 aa11.71□□□□□ -0.53
PPFIA3-211ENST00000602848 SMIM26A0A096LP01 95 aa11.68□□□□□ -0.54
PPFIA3-211ENST00000602848 COA5Q86WW8 74 aa11.67□□□□□ -0.54
PPFIA3-211ENST00000602848 A8MUN3 132 aa11.66□□□□□ -0.54
PPFIA3-211ENST00000602848 LPAP08519 4548 aa11.64□□□□□ -0.55
PPFIA3-211ENST00000602848 LRP2P98164 4655 aa11.63□□□□□ -0.55
PPFIA3-211ENST00000602848 C4orf26Q17RF5 130 aa11.6□□□□□ -0.55
PPFIA3-211ENST00000602848 SEC61BP60468 96 aaKnown RBP11.58□□□□□ -0.56
PPFIA3-211ENST00000602848 COX6B2Q6YFQ2 88 aa11.53□□□□□ -0.56
PPFIA3-211ENST00000602848 CHKB-CPT1BH3BT56 60 aa11.49□□□□□ -0.57
PPFIA3-211ENST00000602848 KRTAP3-1Q9BYR8 98 aa11.46□□□□□ -0.57
PPFIA3-211ENST00000602848 UBR4Q5T4S7 5183 aa11.45□□□□□ -0.58
PPFIA3-211ENST00000602848 V9GYY9 64 aa11.44□□□□□ -0.58
PPFIA3-211ENST00000602848 Q1T7F1 81 aa11.43□□□□□ -0.58
PPFIA3-211ENST00000602848 MPLKIPQ8TAP9 179 aa11.37□□□□□ -0.59
PPFIA3-211ENST00000602848 SPTSSBQ8NFR3 76 aa11.34□□□□□ -0.59
PPFIA3-211ENST00000602848 RBM12B-AS1Q9P1G2 102 aa11.33□□□□□ -0.6
PPFIA3-211ENST00000602848 MUC17Q685J3 4493 aa11.29□□□□□ -0.6
PPFIA3-211ENST00000602848 LINC01558Q9Y6Z2 57 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms