RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 A0A1B0GW54 56 aa7.01□□□□□ -1.29
ARHGEF1-222ENST00000600517 PDE6GP18545 87 aa7.01□□□□□ -1.29
ARHGEF1-222ENST00000600517 NOTCH2NLQ7Z3S9 236 aa7.01□□□□□ -1.29
ARHGEF1-222ENST00000600517 KRTAP9-2Q9BYQ4 174 aa7.01□□□□□ -1.29
ARHGEF1-222ENST00000600517 IGHV6-1A0A0B4J1U7 121 aa6.99□□□□□ -1.29
ARHGEF1-222ENST00000600517 J3KT08 172 aa6.98□□□□□ -1.29
ARHGEF1-222ENST00000600517 COX6B2Q6YFQ2 88 aa6.98□□□□□ -1.29
ARHGEF1-222ENST00000600517 SPCS1Q9Y6A9 102 aa6.98□□□□□ -1.29
ARHGEF1-222ENST00000600517 A0A1B0GVX0 72 aa6.97□□□□□ -1.29
ARHGEF1-222ENST00000600517 C14orf132Q9NPU4 83 aa6.97□□□□□ -1.29
ARHGEF1-222ENST00000600517 C8orf87E5RJ46 101 aa6.96□□□□□ -1.3
ARHGEF1-222ENST00000600517 K7EP34 96 aa6.96□□□□□ -1.3
ARHGEF1-222ENST00000600517 MTURNQ8N3F0 131 aa6.95□□□□□ -1.3
ARHGEF1-222ENST00000600517 PRO0461Q9UI25 63 aa6.94□□□□□ -1.3
ARHGEF1-222ENST00000600517 H3BT86 120 aa6.93□□□□□ -1.3
ARHGEF1-222ENST00000600517 SMCPP49901 116 aaPredicted RBP6.93□□□□□ -1.3
ARHGEF1-222ENST00000600517 NDUFB1O75438 58 aa6.91□□□□□ -1.3
ARHGEF1-222ENST00000600517 A8MWP4 228 aa6.89□□□□□ -1.31
ARHGEF1-222ENST00000600517 M0R2T5 61 aa6.89□□□□□ -1.31
ARHGEF1-222ENST00000600517 LCE2DQ5TA82 110 aaPredicted RBP6.89□□□□□ -1.31
ARHGEF1-222ENST00000600517 LORP23490 312 aaPredicted RBP6.88□□□□□ -1.31
ARHGEF1-222ENST00000600517 KRTAP10-6P60371 365 aaPredicted RBP6.88□□□□□ -1.31
ARHGEF1-222ENST00000600517 NREPQ16612 68 aa6.88□□□□□ -1.31
ARHGEF1-222ENST00000600517 IGKV3D-7A0A0C4DH55 119 aa6.87□□□□□ -1.31
ARHGEF1-222ENST00000600517 A0A1B0GV90 55 aa6.87□□□□□ -1.31
ARHGEF1-222ENST00000600517 GTF2H5Q6ZYL4 71 aa6.86□□□□□ -1.31
ARHGEF1-222ENST00000600517 Q8N9P0 234 aaPredicted RBP6.85□□□□□ -1.31
ARHGEF1-222ENST00000600517 C8orf17Q9NRJ1 99 aa6.85□□□□□ -1.31
ARHGEF1-222ENST00000600517 PRR15Q8IV56 129 aa6.84□□□□□ -1.31
ARHGEF1-222ENST00000600517 FLGP20930 4061 aaPredicted RBP6.84□□□□□ -1.32
ARHGEF1-222ENST00000600517 ZCCHC13Q8WW36 166 aaKnown RBP6.83□□□□□ -1.32
ARHGEF1-222ENST00000600517 MPLKIPQ8TAP9 179 aa6.82□□□□□ -1.32
ARHGEF1-222ENST00000600517 HRES1P13985 223 aa6.81□□□□□ -1.32
ARHGEF1-222ENST00000600517 Q6ZVQ6 151 aa6.8□□□□□ -1.32
ARHGEF1-222ENST00000600517 F8W1H4 67 aa6.79□□□□□ -1.32
ARHGEF1-222ENST00000600517 SPINK7P58062 85 aa6.77□□□□□ -1.33
ARHGEF1-222ENST00000600517 RBM12B-AS1Q9P1G2 102 aa6.77□□□□□ -1.33
ARHGEF1-222ENST00000600517 MMP24-AS1A0A0U1RRL7 71 aa6.76□□□□□ -1.33
ARHGEF1-222ENST00000600517 K7EQZ3 153 aa6.76□□□□□ -1.33
ARHGEF1-222ENST00000600517 BPY2O14599 106 aa6.76□□□□□ -1.33
ARHGEF1-222ENST00000600517 FAM236DA0A1B0GTK5 79 aa6.75□□□□□ -1.33
ARHGEF1-222ENST00000600517 FAM236CP0DP71 79 aa6.75□□□□□ -1.33
ARHGEF1-222ENST00000600517 ETDBQ3ZM63 59 aa6.75□□□□□ -1.33
ARHGEF1-222ENST00000600517 TMEM254Q8TBM7 123 aa6.75□□□□□ -1.33
ARHGEF1-222ENST00000600517 MRPL34Q9BQ48 92 aaKnown RBP6.75□□□□□ -1.33
ARHGEF1-222ENST00000600517 KRTAP9-6A0A140TA67 174 aa6.74□□□□□ -1.33
ARHGEF1-222ENST00000600517 hDV103S1A0JD37 113 aa6.72□□□□□ -1.33
ARHGEF1-222ENST00000600517 KRTAP9-8Q9BYQ0 159 aa6.69□□□□□ -1.34
ARHGEF1-222ENST00000600517 LINC00846Q9NV44 126 aa6.69□□□□□ -1.34
ARHGEF1-222ENST00000600517 Q8N9L7 120 aa6.67□□□□□ -1.34
ARHGEF1-222ENST00000600517 UBL5Q9BZL1 73 aa6.67□□□□□ -1.34
ARHGEF1-222ENST00000600517 NDUFS5O43920 106 aa6.66□□□□□ -1.34
ARHGEF1-222ENST00000600517 CRCT1Q9UGL9 99 aa6.65□□□□□ -1.34
ARHGEF1-222ENST00000600517 CASC2Q6XLA1 102 aa6.64□□□□□ -1.35
ARHGEF1-222ENST00000600517 FSIP2Q5CZC0 6907 aa6.64□□□□□ -1.35
ARHGEF1-222ENST00000600517 WFDC13Q8IUB5 93 aa6.63□□□□□ -1.35
ARHGEF1-222ENST00000600517 Q5W150 140 aa6.62□□□□□ -1.35
ARHGEF1-222ENST00000600517 HCG22E2RYF7 251 aa6.59□□□□□ -1.35
ARHGEF1-222ENST00000600517 MT2AP02795 61 aa6.59□□□□□ -1.35
ARHGEF1-222ENST00000600517 FAM240AA0A1B0GVK7 77 aa6.57□□□□□ -1.36
ARHGEF1-222ENST00000600517 CXCL6P80162 114 aa6.57□□□□□ -1.36
ARHGEF1-222ENST00000600517 IGKV2D-30A0A075B6S6 120 aa6.55□□□□□ -1.36
ARHGEF1-222ENST00000600517 IGKV2-30P06310 120 aa6.55□□□□□ -1.36
ARHGEF1-222ENST00000600517 C7orf65Q6ZTY9 151 aa6.54□□□□□ -1.36
ARHGEF1-222ENST00000600517 MT1FP04733 61 aa6.52□□□□□ -1.37
ARHGEF1-222ENST00000600517 ACYP1P07311 99 aa6.52□□□□□ -1.37
ARHGEF1-222ENST00000600517 H1FX-AS1Q4G0G2 97 aa6.52□□□□□ -1.37
ARHGEF1-222ENST00000600517 KRTAP10-10P60014 251 aa6.49□□□□□ -1.37
ARHGEF1-222ENST00000600517 KRTAP9-3Q9BYQ3 159 aa6.47□□□□□ -1.37
ARHGEF1-222ENST00000600517 TP53AIP1Q9HCN2 124 aa6.47□□□□□ -1.37
ARHGEF1-222ENST00000600517 C4orf26Q17RF5 130 aa6.45□□□□□ -1.38
ARHGEF1-222ENST00000600517 J3QR89 54 aa6.43□□□□□ -1.38
ARHGEF1-222ENST00000600517 LCE2BO14633 110 aa6.41□□□□□ -1.38
ARHGEF1-222ENST00000600517 LINC00643Q86TS7 51 aa6.41□□□□□ -1.38
ARHGEF1-222ENST00000600517 ATP5EP2Q5VTU8 51 aa6.4□□□□□ -1.38
ARHGEF1-222ENST00000600517 K7ERU9 68 aa6.39□□□□□ -1.39
ARHGEF1-222ENST00000600517 KRTAP3-1Q9BYR8 98 aa6.38□□□□□ -1.39
ARHGEF1-222ENST00000600517 USH2AO75445 5202 aa6.37□□□□□ -1.39
ARHGEF1-222ENST00000600517 C1orf64Q8NEQ6 169 aa6.34□□□□□ -1.39
ARHGEF1-222ENST00000600517 HIST1H4AP62805 103 aaKnown RBP6.33□□□□□ -1.4
ARHGEF1-222ENST00000600517 CYP4F30PQ9H0H9 118 aa6.33□□□□□ -1.4
ARHGEF1-222ENST00000600517 A0A087WVE0 104 aa6.32□□□□□ -1.4
ARHGEF1-222ENST00000600517 SSPOA2VEC9 5147 aa6.32□□□□□ -1.4
ARHGEF1-222ENST00000600517 TRAV22A0A0B4J277 110 aa6.31□□□□□ -1.4
ARHGEF1-222ENST00000600517 MT-ATP8P03928 68 aa6.3□□□□□ -1.4
ARHGEF1-222ENST00000600517 LOC101927531A0A1B0GV80 90 aa6.29□□□□□ -1.4
ARHGEF1-222ENST00000600517 UQCRQO14949 82 aa6.28□□□□□ -1.4
ARHGEF1-222ENST00000600517 C5orf47Q569G3 176 aa6.28□□□□□ -1.4
ARHGEF1-222ENST00000600517 S4R3F8 94 aa6.27□□□□□ -1.41
ARHGEF1-222ENST00000600517 KRTAP19-1Q8IUB9 90 aa6.26□□□□□ -1.41
ARHGEF1-222ENST00000600517 CSAG1Q6PB30 78 aa6.25□□□□□ -1.41
ARHGEF1-222ENST00000600517 LCA10Q71F78 164 aa6.25□□□□□ -1.41
ARHGEF1-222ENST00000600517 ATOX1O00244 68 aa6.23□□□□□ -1.41
ARHGEF1-222ENST00000600517 H0Y9P7 68 aa6.22□□□□□ -1.41
ARHGEF1-222ENST00000600517 IMUPQ9GZP8 106 aa6.22□□□□□ -1.41
ARHGEF1-222ENST00000600517 KRTAP19-6Q3LI70 58 aa6.19□□□□□ -1.42
ARHGEF1-222ENST00000600517 KRTAP3-3Q9BYR6 98 aa6.19□□□□□ -1.42
ARHGEF1-222ENST00000600517 FCGBPQ9Y6R7 5405 aaPredicted RBP6.18□□□□□ -1.42
ARHGEF1-222ENST00000600517 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.18□□□□□ -1.42
ARHGEF1-222ENST00000600517 OCR1Q9BZK8 76 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms