RNA–Protein interactions for RNA: ENST00000598452.1

SNRPA-204, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-204ENST00000598452 MPLKIPQ8TAP9 179 aa9.42□□□□□ -0.9
SNRPA-204ENST00000598452 SCGB1C2P0DMR2 95 aa9.41□□□□□ -0.9
SNRPA-204ENST00000598452 PYY3Q5JQD4 70 aa9.41□□□□□ -0.9
SNRPA-204ENST00000598452 MTURNQ8N3F0 131 aa9.41□□□□□ -0.9
SNRPA-204ENST00000598452 VPS25Q9BRG1 176 aa9.41□□□□□ -0.9
SNRPA-204ENST00000598452 UQCR10Q9UDW1 63 aa9.41□□□□□ -0.9
SNRPA-204ENST00000598452 A0A1B0GVX0 72 aa9.4□□□□□ -0.9
SNRPA-204ENST00000598452 J3KT08 172 aa9.4□□□□□ -0.9
SNRPA-204ENST00000598452 MT1FP04733 61 aa9.4□□□□□ -0.9
SNRPA-204ENST00000598452 LCE2BO14633 110 aa9.36□□□□□ -0.91
SNRPA-204ENST00000598452 C9JAW5 83 aa9.35□□□□□ -0.91
SNRPA-204ENST00000598452 NDUFB1O75438 58 aa9.34□□□□□ -0.91
SNRPA-204ENST00000598452 KRTAP10-10P60014 251 aa9.33□□□□□ -0.92
SNRPA-204ENST00000598452 KRTAP9-3Q9BYQ3 159 aa9.33□□□□□ -0.92
SNRPA-204ENST00000598452 BAALC-AS2P0C853 105 aa9.32□□□□□ -0.92
SNRPA-204ENST00000598452 ZCCHC13Q8WW36 166 aaKnown RBP9.32□□□□□ -0.92
SNRPA-204ENST00000598452 FCGBPQ9Y6R7 5405 aaPredicted RBP9.3□□□□□ -0.92
SNRPA-204ENST00000598452 KRTAP19-1Q8IUB9 90 aa9.3□□□□□ -0.92
SNRPA-204ENST00000598452 A0A1B0GW54 56 aa9.29□□□□□ -0.92
SNRPA-204ENST00000598452 Q6ZQT0 140 aa9.29□□□□□ -0.92
SNRPA-204ENST00000598452 JMJD7-PLA2G4BH0Y9G9 81 aa9.26□□□□□ -0.93
SNRPA-204ENST00000598452 SPINK7P58062 85 aa9.26□□□□□ -0.93
SNRPA-204ENST00000598452 PDE6GP18545 87 aa9.24□□□□□ -0.93
SNRPA-204ENST00000598452 Q8N9P0 234 aaPredicted RBP9.24□□□□□ -0.93
SNRPA-204ENST00000598452 ATXN8Q156A1 80 aa9.22□□□□□ -0.93
SNRPA-204ENST00000598452 LYRM7Q5U5X0 104 aa9.22□□□□□ -0.93
SNRPA-204ENST00000598452 A8MWP4 228 aa9.2□□□□□ -0.94
SNRPA-204ENST00000598452 LOC110117498A0A087WWA1 95 aa9.19□□□□□ -0.94
SNRPA-204ENST00000598452 M0R143 59 aa9.19□□□□□ -0.94
SNRPA-204ENST00000598452 C8orf17Q9NRJ1 99 aa9.19□□□□□ -0.94
SNRPA-204ENST00000598452 LINC00846Q9NV44 126 aa9.15□□□□□ -0.94
SNRPA-204ENST00000598452 TMA7Q9Y2S6 64 aaKnown RBP9.15□□□□□ -0.94
SNRPA-204ENST00000598452 Q6ZVQ6 151 aa9.13□□□□□ -0.95
SNRPA-204ENST00000598452 IGKV3D-7A0A0C4DH55 119 aa9.12□□□□□ -0.95
SNRPA-204ENST00000598452 WFDC13Q8IUB5 93 aa9.12□□□□□ -0.95
SNRPA-204ENST00000598452 NREPQ16612 68 aa9.11□□□□□ -0.95
SNRPA-204ENST00000598452 PRR15Q8IV56 129 aa9.1□□□□□ -0.95
SNRPA-204ENST00000598452 C14orf132Q9NPU4 83 aa9.08□□□□□ -0.96
SNRPA-204ENST00000598452 TMEM254Q8TBM7 123 aa9.06□□□□□ -0.96
SNRPA-204ENST00000598452 NAA38Q9BRA0 125 aaKnown RBP9.06□□□□□ -0.96
SNRPA-204ENST00000598452 MRPL34Q9BQ48 92 aaKnown RBP9.05□□□□□ -0.96
SNRPA-204ENST00000598452 KRTAP19-6Q3LI70 58 aa9.04□□□□□ -0.96
SNRPA-204ENST00000598452 MMP24-AS1A0A0U1RRL7 71 aa9□□□□□ -0.97
SNRPA-204ENST00000598452 hDV103S1A0JD37 113 aa9□□□□□ -0.97
SNRPA-204ENST00000598452 NDUFS5O43920 106 aa8.98□□□□□ -0.97
SNRPA-204ENST00000598452 H1FX-AS1Q4G0G2 97 aa8.98□□□□□ -0.97
SNRPA-204ENST00000598452 MACF1Q9UPN3 7388 aaKnown RBP8.97□□□□□ -0.97
SNRPA-204ENST00000598452 H3BT86 120 aa8.94□□□□□ -0.98
SNRPA-204ENST00000598452 K7EQZ3 153 aa8.93□□□□□ -0.98
SNRPA-204ENST00000598452 SYNE2Q8WXH0 6885 aaKnown RBP8.93□□□□□ -0.98
SNRPA-204ENST00000598452 BPY2O14599 106 aa8.92□□□□□ -0.98
SNRPA-204ENST00000598452 SMIM6P0DI80 62 aa8.92□□□□□ -0.98
SNRPA-204ENST00000598452 TSTD3H0UI37 97 aa8.9□□□□□ -0.98
SNRPA-204ENST00000598452 C7orf65Q6ZTY9 151 aa8.9□□□□□ -0.98
SNRPA-204ENST00000598452 IGKV2D-30A0A075B6S6 120 aa8.88□□□□□ -0.99
SNRPA-204ENST00000598452 IGKV2-30P06310 120 aa8.88□□□□□ -0.99
SNRPA-204ENST00000598452 BATFQ16520 125 aa8.88□□□□□ -0.99
SNRPA-204ENST00000598452 C9orf118A6NHY6 69 aa8.85□□□□□ -0.99
SNRPA-204ENST00000598452 A0A1W2PPM0 123 aa8.81□□□□□ -1
SNRPA-204ENST00000598452 CASC2Q6XLA1 102 aa8.81□□□□□ -1
SNRPA-204ENST00000598452 Q5W150 140 aa8.8□□□□□ -1
SNRPA-204ENST00000598452 HCG22E2RYF7 251 aa8.79□□□□□ -1
SNRPA-204ENST00000598452 CXCL6P80162 114 aa8.78□□□□□ -1
SNRPA-204ENST00000598452 TAX1BP3O14907 124 aa8.76□□□□□ -1.01
SNRPA-204ENST00000598452 KRTAP6-3Q3LI67 103 aa8.76□□□□□ -1.01
SNRPA-204ENST00000598452 C4orf26Q17RF5 130 aa8.72□□□□□ -1.01
SNRPA-204ENST00000598452 Q8N9L7 120 aa8.72□□□□□ -1.01
SNRPA-204ENST00000598452 UBL5Q9BZL1 73 aa8.7□□□□□ -1.02
SNRPA-204ENST00000598452 SPCS1Q9Y6A9 102 aa8.68□□□□□ -1.02
SNRPA-204ENST00000598452 FAM236AA0A1B0GUQ0 79 aa8.64□□□□□ -1.03
SNRPA-204ENST00000598452 FAM236BA0A1B0GV22 79 aa8.64□□□□□ -1.03
SNRPA-204ENST00000598452 C5orf47Q569G3 176 aa8.63□□□□□ -1.03
SNRPA-204ENST00000598452 S4R3F8 94 aa8.61□□□□□ -1.03
SNRPA-204ENST00000598452 CSAG1Q6PB30 78 aa8.6□□□□□ -1.03
SNRPA-204ENST00000598452 SMCPP49901 116 aaPredicted RBP8.58□□□□□ -1.04
SNRPA-204ENST00000598452 TP53AIP1Q9HCN2 124 aa8.58□□□□□ -1.04
SNRPA-204ENST00000598452 C1orf64Q8NEQ6 169 aa8.57□□□□□ -1.04
SNRPA-204ENST00000598452 KRTAP3-1Q9BYR8 98 aa8.57□□□□□ -1.04
SNRPA-204ENST00000598452 MT1BP07438 61 aa8.56□□□□□ -1.04
SNRPA-204ENST00000598452 A6NN06 94 aa8.53□□□□□ -1.04
SNRPA-204ENST00000598452 COL5A1-AS1Q5SY13 56 aa8.52□□□□□ -1.05
SNRPA-204ENST00000598452 Q5VV11 94 aa8.52□□□□□ -1.05
SNRPA-204ENST00000598452 LOC105371267A0A1B0GV96 52 aa8.51□□□□□ -1.05
SNRPA-204ENST00000598452 LCA10Q71F78 164 aa8.5□□□□□ -1.05
SNRPA-204ENST00000598452 PRO0461Q9UI25 63 aa8.5□□□□□ -1.05
SNRPA-204ENST00000598452 SPRR2GQ9BYE4 73 aa8.48□□□□□ -1.05
SNRPA-204ENST00000598452 K7EP34 96 aa8.47□□□□□ -1.05
SNRPA-204ENST00000598452 KRTAP19-8Q3LI54 63 aa8.47□□□□□ -1.05
SNRPA-204ENST00000598452 KLKP1Q107X0 134 aa8.43□□□□□ -1.06
SNRPA-204ENST00000598452 NEBP20929 6669 aa8.42□□□□□ -1.06
SNRPA-204ENST00000598452 GTF2H5Q6ZYL4 71 aa8.41□□□□□ -1.06
SNRPA-204ENST00000598452 MUC12Q9UKN1 5478 aa8.39□□□□□ -1.07
SNRPA-204ENST00000598452 KRTAP10-5P60370 271 aa8.39□□□□□ -1.07
SNRPA-204ENST00000598452 F8W1H4 67 aa8.37□□□□□ -1.07
SNRPA-204ENST00000598452 CYP4F30PQ9H0H9 118 aa8.37□□□□□ -1.07
SNRPA-204ENST00000598452 CRIPTQ9P021 101 aa8.36□□□□□ -1.07
SNRPA-204ENST00000598452 KRTAP3-3Q9BYR6 98 aa8.35□□□□□ -1.07
SNRPA-204ENST00000598452 TRAV22A0A0B4J277 110 aa8.33□□□□□ -1.08
SNRPA-204ENST00000598452 LOC101927531A0A1B0GV80 90 aa8.33□□□□□ -1.08
SNRPA-204ENST00000598452 ETDBQ3ZM63 59 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms