RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 NDUFS5O43920 106 aa9.15□□□□□ -0.94
ZNF541-205ENST00000595558 Q6ZR54 194 aa9.15□□□□□ -0.94
ZNF541-205ENST00000595558 PRR15LQ9BU68 103 aa9.15□□□□□ -0.94
ZNF541-205ENST00000595558 IGLV7-46A0A075B6I9 117 aa9.15□□□□□ -0.95
ZNF541-205ENST00000595558 WWC2-AS2Q96NR7 200 aa9.15□□□□□ -0.95
ZNF541-205ENST00000595558 LINC00483Q53H64 154 aa9.14□□□□□ -0.95
ZNF541-205ENST00000595558 V9GYY9 64 aa9.13□□□□□ -0.95
ZNF541-205ENST00000595558 CHKB-CPT1BH3BT56 60 aa9.13□□□□□ -0.95
ZNF541-205ENST00000595558 IGLV5-52A0A0A0MRZ9 124 aa9.11□□□□□ -0.95
ZNF541-205ENST00000595558 A0A1B0GVX0 72 aa9.11□□□□□ -0.95
ZNF541-205ENST00000595558 KRTAP10-2P60368 255 aa9.11□□□□□ -0.95
ZNF541-205ENST00000595558 FAT2Q9NYQ8 4349 aa9.09□□□□□ -0.95
ZNF541-205ENST00000595558 C1orf134Q5TEV5 83 aa9.09□□□□□ -0.95
ZNF541-205ENST00000595558 PKHD1P08F94 4074 aa9.09□□□□□ -0.95
ZNF541-205ENST00000595558 LIMD2Q9BT23 127 aa9.08□□□□□ -0.96
ZNF541-205ENST00000595558 TP53AIP1Q9HCN2 124 aa9.08□□□□□ -0.96
ZNF541-205ENST00000595558 PKD1P98161 4303 aa9.07□□□□□ -0.96
ZNF541-205ENST00000595558 SPINK6Q6UWN8 80 aa9.06□□□□□ -0.96
ZNF541-205ENST00000595558 MRPL34Q9BQ48 92 aaKnown RBP9.05□□□□□ -0.96
ZNF541-205ENST00000595558 SPAG11AQ6PDA7 123 aa9.05□□□□□ -0.96
ZNF541-205ENST00000595558 ZNF861PO60384 105 aa9.04□□□□□ -0.96
ZNF541-205ENST00000595558 CDK2AP2O75956 126 aa9.04□□□□□ -0.96
ZNF541-205ENST00000595558 LCA10Q71F78 164 aa9.03□□□□□ -0.96
ZNF541-205ENST00000595558 VPS13BQ7Z7G8 4022 aa9.03□□□□□ -0.96
ZNF541-205ENST00000595558 PMAIP1Q13794 54 aa9.03□□□□□ -0.96
ZNF541-205ENST00000595558 Q5W150 140 aa9.02□□□□□ -0.96
ZNF541-205ENST00000595558 ZNF706Q9Y5V0 76 aaPredicted RBP9.02□□□□□ -0.96
ZNF541-205ENST00000595558 PLAC8Q9NZF1 115 aa9.02□□□□□ -0.97
ZNF541-205ENST00000595558 HRES1P13985 223 aa9.01□□□□□ -0.97
ZNF541-205ENST00000595558 LOC101927531A0A1B0GV80 90 aa9□□□□□ -0.97
ZNF541-205ENST00000595558 CIRBP-AS1Q8TBR5 109 aa9□□□□□ -0.97
ZNF541-205ENST00000595558 A6NED7 52 aa8.99□□□□□ -0.97
ZNF541-205ENST00000595558 Q75L30 129 aa8.99□□□□□ -0.97
ZNF541-205ENST00000595558 SPTSSBQ8NFR3 76 aa8.99□□□□□ -0.97
ZNF541-205ENST00000595558 KRTAP10-1P60331 282 aa8.94□□□□□ -0.98
ZNF541-205ENST00000595558 IGLV7-43P04211 117 aa8.93□□□□□ -0.98
ZNF541-205ENST00000595558 KRTAP13-3Q3SY46 172 aa8.93□□□□□ -0.98
ZNF541-205ENST00000595558 PRR26Q8N8Z3 221 aa8.93□□□□□ -0.98
ZNF541-205ENST00000595558 LINC01558Q9Y6Z2 57 aa8.93□□□□□ -0.98
ZNF541-205ENST00000595558 SEC61GP60059 68 aa8.91□□□□□ -0.98
ZNF541-205ENST00000595558 SPINK7P58062 85 aa8.9□□□□□ -0.98
ZNF541-205ENST00000595558 RETNLBQ9BQ08 111 aa8.89□□□□□ -0.99
ZNF541-205ENST00000595558 SACSQ9NZJ4 4579 aa8.89□□□□□ -0.99
ZNF541-205ENST00000595558 ATP11AUNQ6ZP68 121 aa8.85□□□□□ -0.99
ZNF541-205ENST00000595558 CDC42SE1Q9NRR8 79 aa8.84□□□□□ -0.99
ZNF541-205ENST00000595558 FAT1Q14517 4588 aa8.84□□□□□ -0.99
ZNF541-205ENST00000595558 KMT2CQ8NEZ4 4911 aaKnown RBP8.81□□□□□ -1
ZNF541-205ENST00000595558 A6NN06 94 aa8.81□□□□□ -1
ZNF541-205ENST00000595558 KRTAP13-2Q52LG2 175 aa8.8□□□□□ -1
ZNF541-205ENST00000595558 LINC00313P59037 77 aa8.78□□□□□ -1
ZNF541-205ENST00000595558 SSBP3-AS1Q7Z2R9 100 aa8.77□□□□□ -1.01
ZNF541-205ENST00000595558 KTN1-AS1Q86SY8 53 aa8.77□□□□□ -1.01
ZNF541-205ENST00000595558 DYNC1H1Q14204 4646 aaKnown RBP8.76□□□□□ -1.01
ZNF541-205ENST00000595558 ACYP2P14621 99 aa8.75□□□□□ -1.01
ZNF541-205ENST00000595558 C8orf87E5RJ46 101 aa8.75□□□□□ -1.01
ZNF541-205ENST00000595558 SMR3BP02814 79 aaPredicted RBP8.74□□□□□ -1.01
ZNF541-205ENST00000595558 Q6ZSA8 131 aa8.73□□□□□ -1.01
ZNF541-205ENST00000595558 DMAC1Q96GE9 116 aa8.73□□□□□ -1.01
ZNF541-205ENST00000595558 FAM229AH3BQW9 127 aa8.69□□□□□ -1.02
ZNF541-205ENST00000595558 KRTAP16-1A8MUX0 517 aa8.69□□□□□ -1.02
ZNF541-205ENST00000595558 IGKV2-30P06310 120 aa8.69□□□□□ -1.02
ZNF541-205ENST00000595558 KRTAP1-4P0C5Y4 121 aa8.68□□□□□ -1.02
ZNF541-205ENST00000595558 RBM12B-AS1Q9P1G2 102 aa8.66□□□□□ -1.02
ZNF541-205ENST00000595558 PLA2G1BP04054 148 aaKnown RBP8.65□□□□□ -1.02
ZNF541-205ENST00000595558 IGKV2D-30A0A075B6S6 120 aa8.65□□□□□ -1.03
ZNF541-205ENST00000595558 RYR2Q92736 4967 aa8.61□□□□□ -1.03
ZNF541-205ENST00000595558 A0A1B0GU69 56 aa8.6□□□□□ -1.03
ZNF541-205ENST00000595558 C7orf65Q6ZTY9 151 aa8.6□□□□□ -1.03
ZNF541-205ENST00000595558 APOBP04114 4563 aaKnown RBP8.6□□□□□ -1.03
ZNF541-205ENST00000595558 TYMSOSQ8TAI1 123 aa8.54□□□□□ -1.04
ZNF541-205ENST00000595558 LRP1Q07954 4544 aaKnown RBP8.54□□□□□ -1.04
ZNF541-205ENST00000595558 ADM2Q7Z4H4 148 aa8.53□□□□□ -1.04
ZNF541-205ENST00000595558 PRAC1Q96KF2 57 aa8.53□□□□□ -1.04
ZNF541-205ENST00000595558 RYR3Q15413 4870 aa8.5□□□□□ -1.05
ZNF541-205ENST00000595558 SPINK1P00995 79 aa8.49□□□□□ -1.05
ZNF541-205ENST00000595558 Q8N1X5 172 aa8.49□□□□□ -1.05
ZNF541-205ENST00000595558 SPATA8Q6RVD6 105 aa8.49□□□□□ -1.05
ZNF541-205ENST00000595558 C4orf48Q5BLP8 95 aa8.48□□□□□ -1.05
ZNF541-205ENST00000595558 FLG2Q5D862 2391 aaPredicted RBP8.47□□□□□ -1.05
ZNF541-205ENST00000595558 MIR22HGQ0VDD5 57 aa8.46□□□□□ -1.05
ZNF541-205ENST00000595558 PKHD1L1Q86WI1 4243 aa8.44□□□□□ -1.06
ZNF541-205ENST00000595558 KRTAP21-3Q3LHN1 58 aa8.44□□□□□ -1.06
ZNF541-205ENST00000595558 UQCR11O14957 56 aa8.43□□□□□ -1.06
ZNF541-205ENST00000595558 MYCBP2O75592 4640 aa8.43□□□□□ -1.06
ZNF541-205ENST00000595558 A0A1B0GVY2 172 aa8.41□□□□□ -1.06
ZNF541-205ENST00000595558 C9orf92A6NGG3 77 aa8.41□□□□□ -1.06
ZNF541-205ENST00000595558 DMBT1Q9UGM3 2413 aaPredicted RBP8.41□□□□□ -1.06
ZNF541-205ENST00000595558 LINC00304Q8N9R0 145 aa8.39□□□□□ -1.07
ZNF541-205ENST00000595558 KRTAP10-4P60372 401 aaPredicted RBP8.37□□□□□ -1.07
ZNF541-205ENST00000595558 KIAA1109Q2LD37 5005 aa8.33□□□□□ -1.08
ZNF541-205ENST00000595558 HSPG2P98160 4391 aa8.32□□□□□ -1.08
ZNF541-205ENST00000595558 KRTAP17-1Q9BYP8 105 aa8.28□□□□□ -1.08
ZNF541-205ENST00000595558 KRTAP3-1Q9BYR8 98 aa8.28□□□□□ -1.08
ZNF541-205ENST00000595558 TNXBP22105 4242 aa8.26□□□□□ -1.09
ZNF541-205ENST00000595558 RPS29P62273 56 aaKnown RBP8.25□□□□□ -1.09
ZNF541-205ENST00000595558 H0YAA0 97 aa8.22□□□□□ -1.09
ZNF541-205ENST00000595558 EPPK1P58107 5090 aaKnown RBP8.22□□□□□ -1.09
ZNF541-205ENST00000595558 FAT3Q8TDW7 4589 aa8.21□□□□□ -1.1
ZNF541-205ENST00000595558 A8MUU9 505 aa8.2□□□□□ -1.1
ZNF541-205ENST00000595558 CSAG1Q6PB30 78 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms