RNA–Protein interactions for RNA: ENST00000595235.5

SSX4B-201, Transcript of SSX family member 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX4B, Length 1,221 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-201ENST00000595235 A8MUU9 505 aa3.03□□□□□ -1.92
SSX4B-201ENST00000595235 TMEM256-PLSCR3K7ERE1 68 aa3.03□□□□□ -1.92
SSX4B-201ENST00000595235 COX6CP09669 75 aa3.03□□□□□ -1.92
SSX4B-201ENST00000595235 SIGMAR1Q99720 223 aa3.03□□□□□ -1.92
SSX4B-201ENST00000595235 KRTAP16-1A8MUX0 517 aa3.02□□□□□ -1.93
SSX4B-201ENST00000595235 H3BQ85 93 aa3.02□□□□□ -1.93
SSX4B-201ENST00000595235 M0R2T5 61 aa3.02□□□□□ -1.93
SSX4B-201ENST00000595235 CCKP06307 115 aa3.02□□□□□ -1.93
SSX4B-201ENST00000595235 IGKV4-1P06312 121 aa3.02□□□□□ -1.93
SSX4B-201ENST00000595235 UBE2V1Q13404 147 aa3.02□□□□□ -1.93
SSX4B-201ENST00000595235 DEFB116Q30KQ4 102 aa3.02□□□□□ -1.93
SSX4B-201ENST00000595235 KRTAP15-1Q3LI76 137 aa3.02□□□□□ -1.93
SSX4B-201ENST00000595235 NOTCH2NLQ7Z3S9 236 aa3.02□□□□□ -1.93
SSX4B-201ENST00000595235 FLGP20930 4061 aaPredicted RBP3.02□□□□□ -1.93
SSX4B-201ENST00000595235 TRACP01848 142 aa3.01□□□□□ -1.93
SSX4B-201ENST00000595235 LINC00472Q9H8W2 130 aa3.01□□□□□ -1.93
SSX4B-201ENST00000595235 SCGB1C2P0DMR2 95 aa3□□□□□ -1.93
SSX4B-201ENST00000595235 LINC00313P59037 77 aa3□□□□□ -1.93
SSX4B-201ENST00000595235 NAA38Q9BRA0 125 aaKnown RBP3□□□□□ -1.93
SSX4B-201ENST00000595235 VPS25Q9BRG1 176 aa3□□□□□ -1.93
SSX4B-201ENST00000595235 IGHV6-1A0A0B4J1U7 121 aa2.98□□□□□ -1.93
SSX4B-201ENST00000595235 BAALC-AS2P0C853 105 aa2.98□□□□□ -1.93
SSX4B-201ENST00000595235 RBM3P98179 157 aaKnown RBP2.98□□□□□ -1.93
SSX4B-201ENST00000595235 CRCT1Q9UGL9 99 aa2.98□□□□□ -1.93
SSX4B-201ENST00000595235 A0A1B0GVX0 72 aa2.97□□□□□ -1.93
SSX4B-201ENST00000595235 M0R143 59 aa2.97□□□□□ -1.93
SSX4B-201ENST00000595235 DSCR8Q96T75 97 aa2.97□□□□□ -1.93
SSX4B-201ENST00000595235 C9JAW5 83 aa2.96□□□□□ -1.94
SSX4B-201ENST00000595235 SMIM6P0DI80 62 aa2.96□□□□□ -1.94
SSX4B-201ENST00000595235 ATXN8Q156A1 80 aa2.96□□□□□ -1.94
SSX4B-201ENST00000595235 TRBV20-1A0A075B6N2 111 aa2.95□□□□□ -1.94
SSX4B-201ENST00000595235 C8orf87E5RJ46 101 aa2.95□□□□□ -1.94
SSX4B-201ENST00000595235 HRES1P13985 223 aa2.95□□□□□ -1.94
SSX4B-201ENST00000595235 Q6ZQT0 140 aa2.95□□□□□ -1.94
SSX4B-201ENST00000595235 LOC110117498A0A087WWA1 95 aa2.94□□□□□ -1.94
SSX4B-201ENST00000595235 MPLKIPQ8TAP9 179 aa2.94□□□□□ -1.94
SSX4B-201ENST00000595235 C14orf132Q9NPU4 83 aa2.94□□□□□ -1.94
SSX4B-201ENST00000595235 JMJD7-PLA2G4BH0Y9G9 81 aa2.93□□□□□ -1.94
SSX4B-201ENST00000595235 J3KT08 172 aa2.93□□□□□ -1.94
SSX4B-201ENST00000595235 BATFQ16520 125 aa2.93□□□□□ -1.94
SSX4B-201ENST00000595235 FAM236DA0A1B0GTK5 79 aa2.92□□□□□ -1.94
SSX4B-201ENST00000595235 LOC105371267A0A1B0GV96 52 aa2.92□□□□□ -1.94
SSX4B-201ENST00000595235 FAM236CP0DP71 79 aa2.92□□□□□ -1.94
SSX4B-201ENST00000595235 ZCCHC13Q8WW36 166 aaKnown RBP2.92□□□□□ -1.94
SSX4B-201ENST00000595235 IGKV3D-7A0A0C4DH55 119 aa2.91□□□□□ -1.94
SSX4B-201ENST00000595235 A8MWP4 228 aa2.91□□□□□ -1.94
SSX4B-201ENST00000595235 TSTD3H0UI37 97 aa2.91□□□□□ -1.94
SSX4B-201ENST00000595235 LYRM7Q5U5X0 104 aa2.91□□□□□ -1.94
SSX4B-201ENST00000595235 MTURNQ8N3F0 131 aa2.91□□□□□ -1.94
SSX4B-201ENST00000595235 Q8N9P0 234 aaPredicted RBP2.91□□□□□ -1.94
SSX4B-201ENST00000595235 C8orf17Q9NRJ1 99 aa2.91□□□□□ -1.94
SSX4B-201ENST00000595235 RBM12B-AS1Q9P1G2 102 aa2.91□□□□□ -1.94
SSX4B-201ENST00000595235 A0A1B0GW54 56 aa2.9□□□□□ -1.95
SSX4B-201ENST00000595235 TAX1BP3O14907 124 aa2.9□□□□□ -1.95
SSX4B-201ENST00000595235 NDUFB1O75438 58 aa2.9□□□□□ -1.95
SSX4B-201ENST00000595235 MT2AP02795 61 aa2.9□□□□□ -1.95
SSX4B-201ENST00000595235 PDE6GP18545 87 aa2.9□□□□□ -1.95
SSX4B-201ENST00000595235 SPINK7P58062 85 aa2.89□□□□□ -1.95
SSX4B-201ENST00000595235 MMP24-AS1A0A0U1RRL7 71 aa2.88□□□□□ -1.95
SSX4B-201ENST00000595235 A0A1W2PPM0 123 aa2.88□□□□□ -1.95
SSX4B-201ENST00000595235 H3BT86 120 aa2.88□□□□□ -1.95
SSX4B-201ENST00000595235 MT1FP04733 61 aa2.88□□□□□ -1.95
SSX4B-201ENST00000595235 NREPQ16612 68 aa2.88□□□□□ -1.95
SSX4B-201ENST00000595235 Q6ZVQ6 151 aa2.88□□□□□ -1.95
SSX4B-201ENST00000595235 PRR15Q8IV56 129 aa2.88□□□□□ -1.95
SSX4B-201ENST00000595235 K7EQZ3 153 aa2.87□□□□□ -1.95
SSX4B-201ENST00000595235 WFDC13Q8IUB5 93 aa2.86□□□□□ -1.95
SSX4B-201ENST00000595235 TMEM254Q8TBM7 123 aa2.86□□□□□ -1.95
SSX4B-201ENST00000595235 MRPL34Q9BQ48 92 aaKnown RBP2.86□□□□□ -1.95
SSX4B-201ENST00000595235 USH2AO75445 5202 aa2.86□□□□□ -1.95
SSX4B-201ENST00000595235 SSPOA2VEC9 5147 aa2.85□□□□□ -1.95
SSX4B-201ENST00000595235 hDV103S1A0JD37 113 aa2.84□□□□□ -1.95
SSX4B-201ENST00000595235 SPCS1Q9Y6A9 102 aa2.84□□□□□ -1.95
SSX4B-201ENST00000595235 BPY2O14599 106 aa2.83□□□□□ -1.96
SSX4B-201ENST00000595235 KRTAP10-10P60014 251 aa2.83□□□□□ -1.96
SSX4B-201ENST00000595235 Q8N9L7 120 aa2.83□□□□□ -1.96
SSX4B-201ENST00000595235 NDUFS5O43920 106 aa2.82□□□□□ -1.96
SSX4B-201ENST00000595235 Q5W150 140 aa2.82□□□□□ -1.96
SSX4B-201ENST00000595235 PRO0461Q9UI25 63 aa2.82□□□□□ -1.96
SSX4B-201ENST00000595235 IGKV2D-30A0A075B6S6 120 aa2.8□□□□□ -1.96
SSX4B-201ENST00000595235 HCG22E2RYF7 251 aa2.8□□□□□ -1.96
SSX4B-201ENST00000595235 IGKV2-30P06310 120 aa2.8□□□□□ -1.96
SSX4B-201ENST00000595235 CASC2Q6XLA1 102 aa2.8□□□□□ -1.96
SSX4B-201ENST00000595235 LINC00846Q9NV44 126 aa2.8□□□□□ -1.96
SSX4B-201ENST00000595235 MACF1Q9UPN3 7388 aaKnown RBP2.8□□□□□ -1.96
SSX4B-201ENST00000595235 K7EP34 96 aa2.79□□□□□ -1.96
SSX4B-201ENST00000595235 COL5A1-AS1Q5SY13 56 aa2.79□□□□□ -1.96
SSX4B-201ENST00000595235 C7orf65Q6ZTY9 151 aa2.79□□□□□ -1.96
SSX4B-201ENST00000595235 H1FX-AS1Q4G0G2 97 aa2.78□□□□□ -1.96
SSX4B-201ENST00000595235 UBL5Q9BZL1 73 aa2.77□□□□□ -1.97
SSX4B-201ENST00000595235 FCGBPQ9Y6R7 5405 aaPredicted RBP2.76□□□□□ -1.97
SSX4B-201ENST00000595235 SYNE2Q8WXH0 6885 aaKnown RBP2.76□□□□□ -1.97
SSX4B-201ENST00000595235 CXCL6P80162 114 aa2.75□□□□□ -1.97
SSX4B-201ENST00000595235 C4orf26Q17RF5 130 aa2.75□□□□□ -1.97
SSX4B-201ENST00000595235 PCP4L1A6NKN8 68 aa2.74□□□□□ -1.97
SSX4B-201ENST00000595235 KRTAP19-6Q3LI70 58 aa2.73□□□□□ -1.97
SSX4B-201ENST00000595235 ETDBQ3ZM63 59 aa2.73□□□□□ -1.97
SSX4B-201ENST00000595235 GTF2H5Q6ZYL4 71 aa2.73□□□□□ -1.97
SSX4B-201ENST00000595235 F8W1H4 67 aa2.72□□□□□ -1.97
SSX4B-201ENST00000595235 SVIPQ8NHG7 77 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms