RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 NDUFS5O43920 106 aa9.84□□□□□ -0.83
LIG1-206ENST00000594067 A0A1B0GVX0 72 aa9.84□□□□□ -0.83
LIG1-206ENST00000594067 ZNF861PO60384 105 aa9.84□□□□□ -0.83
LIG1-206ENST00000594067 KMT2AQ03164 3969 aa9.84□□□□□ -0.83
LIG1-206ENST00000594067 DNAH17Q9UFH2 4485 aa9.84□□□□□ -0.83
LIG1-206ENST00000594067 CDK2AP2O75956 126 aa9.82□□□□□ -0.84
LIG1-206ENST00000594067 PLAC8Q9NZF1 115 aa9.82□□□□□ -0.84
LIG1-206ENST00000594067 PRKDCP78527 4128 aaKnown RBP9.82□□□□□ -0.84
LIG1-206ENST00000594067 A0A087X002 238 aa9.8□□□□□ -0.84
LIG1-206ENST00000594067 NOTCH2NLQ7Z3S9 236 aa9.8□□□□□ -0.84
LIG1-206ENST00000594067 A6NED7 52 aa9.79□□□□□ -0.84
LIG1-206ENST00000594067 SPAG11AQ6PDA7 123 aa9.78□□□□□ -0.84
LIG1-206ENST00000594067 MRPL34Q9BQ48 92 aaKnown RBP9.78□□□□□ -0.84
LIG1-206ENST00000594067 LINC01558Q9Y6Z2 57 aa9.78□□□□□ -0.84
LIG1-206ENST00000594067 SPTSSBQ8NFR3 76 aa9.77□□□□□ -0.85
LIG1-206ENST00000594067 ATP11AUNQ6ZP68 121 aa9.77□□□□□ -0.85
LIG1-206ENST00000594067 SPINK6Q6UWN8 80 aa9.76□□□□□ -0.85
LIG1-206ENST00000594067 HRES1P13985 223 aa9.75□□□□□ -0.85
LIG1-206ENST00000594067 CDC42SE1Q9NRR8 79 aa9.72□□□□□ -0.85
LIG1-206ENST00000594067 IGLV7-43P04211 117 aa9.72□□□□□ -0.85
LIG1-206ENST00000594067 CIRBP-AS1Q8TBR5 109 aa9.71□□□□□ -0.85
LIG1-206ENST00000594067 FBN3Q75N90 2809 aa9.71□□□□□ -0.85
LIG1-206ENST00000594067 C1orf134Q5TEV5 83 aa9.71□□□□□ -0.86
LIG1-206ENST00000594067 KTN1-AS1Q86SY8 53 aa9.69□□□□□ -0.86
LIG1-206ENST00000594067 TGP01266 2768 aa9.69□□□□□ -0.86
LIG1-206ENST00000594067 A6NN06 94 aa9.67□□□□□ -0.86
LIG1-206ENST00000594067 MEGF8Q7Z7M0 2845 aa9.66□□□□□ -0.86
LIG1-206ENST00000594067 Q5W150 140 aa9.66□□□□□ -0.86
LIG1-206ENST00000594067 ALMS1Q8TCU4 4167 aa9.65□□□□□ -0.86
LIG1-206ENST00000594067 SPINK7P58062 85 aa9.65□□□□□ -0.87
LIG1-206ENST00000594067 DNAH11Q96DT5 4516 aa9.64□□□□□ -0.87
LIG1-206ENST00000594067 LY6G6CO95867 125 aa9.63□□□□□ -0.87
LIG1-206ENST00000594067 KRTAP13-3Q3SY46 172 aa9.63□□□□□ -0.87
LIG1-206ENST00000594067 DNAH6Q9C0G6 4158 aa9.63□□□□□ -0.87
LIG1-206ENST00000594067 PRR26Q8N8Z3 221 aa9.61□□□□□ -0.87
LIG1-206ENST00000594067 DNAH5Q8TE73 4624 aa9.6□□□□□ -0.87
LIG1-206ENST00000594067 KRTAP10-2P60368 255 aa9.59□□□□□ -0.88
LIG1-206ENST00000594067 SSBP3-AS1Q7Z2R9 100 aa9.59□□□□□ -0.88
LIG1-206ENST00000594067 RBM12B-AS1Q9P1G2 102 aa9.55□□□□□ -0.88
LIG1-206ENST00000594067 C8orf87E5RJ46 101 aa9.53□□□□□ -0.88
LIG1-206ENST00000594067 ACYP2P14621 99 aa9.52□□□□□ -0.88
LIG1-206ENST00000594067 RETNLBQ9BQ08 111 aa9.52□□□□□ -0.89
LIG1-206ENST00000594067 DNHD1Q96M86 4753 aa9.51□□□□□ -0.89
LIG1-206ENST00000594067 KRTAP13-2Q52LG2 175 aa9.51□□□□□ -0.89
LIG1-206ENST00000594067 LINC00313P59037 77 aa9.5□□□□□ -0.89
LIG1-206ENST00000594067 C7orf65Q6ZTY9 151 aa9.49□□□□□ -0.89
LIG1-206ENST00000594067 LRP1BQ9NZR2 4599 aa9.49□□□□□ -0.89
LIG1-206ENST00000594067 DMAC1Q96GE9 116 aa9.47□□□□□ -0.89
LIG1-206ENST00000594067 KRTAP10-1P60331 282 aa9.46□□□□□ -0.9
LIG1-206ENST00000594067 FAM229AH3BQW9 127 aa9.43□□□□□ -0.9
LIG1-206ENST00000594067 Q6ZSA8 131 aa9.4□□□□□ -0.9
LIG1-206ENST00000594067 PKD1P98161 4303 aa9.4□□□□□ -0.9
LIG1-206ENST00000594067 IGKV2-30P06310 120 aa9.38□□□□□ -0.91
LIG1-206ENST00000594067 KRTAP16-1A8MUX0 517 aa9.37□□□□□ -0.91
LIG1-206ENST00000594067 KRTAP1-4P0C5Y4 121 aa9.37□□□□□ -0.91
LIG1-206ENST00000594067 FAT2Q9NYQ8 4349 aa9.37□□□□□ -0.91
LIG1-206ENST00000594067 HYDINQ4G0P3 5121 aa9.37□□□□□ -0.91
LIG1-206ENST00000594067 A0A1B0GU69 56 aa9.35□□□□□ -0.91
LIG1-206ENST00000594067 VPS13BQ7Z7G8 4022 aa9.34□□□□□ -0.91
LIG1-206ENST00000594067 IGKV2D-30A0A075B6S6 120 aa9.3□□□□□ -0.92
LIG1-206ENST00000594067 SPATA8Q6RVD6 105 aa9.3□□□□□ -0.92
LIG1-206ENST00000594067 PLA2G1BP04054 148 aaKnown RBP9.29□□□□□ -0.92
LIG1-206ENST00000594067 C4orf48Q5BLP8 95 aa9.28□□□□□ -0.92
LIG1-206ENST00000594067 TYMSOSQ8TAI1 123 aa9.27□□□□□ -0.93
LIG1-206ENST00000594067 PRAC1Q96KF2 57 aa9.25□□□□□ -0.93
LIG1-206ENST00000594067 ADM2Q7Z4H4 148 aa9.23□□□□□ -0.93
LIG1-206ENST00000594067 UQCR11O14957 56 aa9.21□□□□□ -0.93
LIG1-206ENST00000594067 MIR22HGQ0VDD5 57 aa9.21□□□□□ -0.93
LIG1-206ENST00000594067 SPINK1P00995 79 aa9.2□□□□□ -0.94
LIG1-206ENST00000594067 PKHD1P08F94 4074 aa9.13□□□□□ -0.95
LIG1-206ENST00000594067 LINC00304Q8N9R0 145 aa9.13□□□□□ -0.95
LIG1-206ENST00000594067 Q8N1X5 172 aa9.09□□□□□ -0.95
LIG1-206ENST00000594067 SMR3BP02814 79 aaPredicted RBP9.08□□□□□ -0.96
LIG1-206ENST00000594067 SACSQ9NZJ4 4579 aa9.08□□□□□ -0.96
LIG1-206ENST00000594067 DYNC1H1Q14204 4646 aaKnown RBP9.04□□□□□ -0.96
LIG1-206ENST00000594067 C9orf92A6NGG3 77 aa9.02□□□□□ -0.97
LIG1-206ENST00000594067 RPS29P62273 56 aaKnown RBP9.02□□□□□ -0.97
LIG1-206ENST00000594067 LINC01554Q52M75 96 aa9.02□□□□□ -0.97
LIG1-206ENST00000594067 FAT1Q14517 4588 aa8.99□□□□□ -0.97
LIG1-206ENST00000594067 CSAG1Q6PB30 78 aa8.95□□□□□ -0.98
LIG1-206ENST00000594067 PKHD1L1Q86WI1 4243 aa8.92□□□□□ -0.98
LIG1-206ENST00000594067 A8MUU9 505 aa8.92□□□□□ -0.98
LIG1-206ENST00000594067 C20orf166-AS1Q96NR2 134 aa8.92□□□□□ -0.98
LIG1-206ENST00000594067 APOBP04114 4563 aaKnown RBP8.91□□□□□ -0.98
LIG1-206ENST00000594067 KRTAP10-4P60372 401 aaPredicted RBP8.88□□□□□ -0.99
LIG1-206ENST00000594067 H0YAA0 97 aa8.88□□□□□ -0.99
LIG1-206ENST00000594067 KRTAP3-1Q9BYR8 98 aa8.86□□□□□ -0.99
LIG1-206ENST00000594067 A0A1B0GVY2 172 aa8.85□□□□□ -0.99
LIG1-206ENST00000594067 A0A1B0GU33 70 aa8.78□□□□□ -1
LIG1-206ENST00000594067 H1FX-AS1Q4G0G2 97 aa8.74□□□□□ -1.01
LIG1-206ENST00000594067 KRTAP21-3Q3LHN1 58 aa8.72□□□□□ -1.01
LIG1-206ENST00000594067 FLG2Q5D862 2391 aaPredicted RBP8.69□□□□□ -1.02
LIG1-206ENST00000594067 RYR2Q92736 4967 aa8.68□□□□□ -1.02
LIG1-206ENST00000594067 COX6B2Q6YFQ2 88 aa8.67□□□□□ -1.02
LIG1-206ENST00000594067 FAT3Q8TDW7 4589 aa8.67□□□□□ -1.02
LIG1-206ENST00000594067 KRTAP25-1Q3LHN0 102 aa8.67□□□□□ -1.02
LIG1-206ENST00000594067 LRP1Q07954 4544 aaKnown RBP8.65□□□□□ -1.03
LIG1-206ENST00000594067 H3BS24 57 aa8.64□□□□□ -1.03
LIG1-206ENST00000594067 TNXBP22105 4242 aa8.61□□□□□ -1.03
LIG1-206ENST00000594067 KMT2CQ8NEZ4 4911 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms