RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 VAMP8Q9BV40 100 aa8.48□□□□□ -1.05
RETREG3-212ENST00000593251 LINC00846Q9NV44 126 aa8.47□□□□□ -1.05
RETREG3-212ENST00000593251 PSMB2P49721 201 aa8.46□□□□□ -1.06
RETREG3-212ENST00000593251 FXYD2P54710 66 aa8.46□□□□□ -1.06
RETREG3-212ENST00000593251 C8orf87E5RJ46 101 aa8.45□□□□□ -1.06
RETREG3-212ENST00000593251 COX6CP09669 75 aa8.44□□□□□ -1.06
RETREG3-212ENST00000593251 A0A1B0GVX0 72 aa8.43□□□□□ -1.06
RETREG3-212ENST00000593251 SPINK7P58062 85 aa8.43□□□□□ -1.06
RETREG3-212ENST00000593251 ZCCHC13Q8WW36 166 aaKnown RBP8.43□□□□□ -1.06
RETREG3-212ENST00000593251 UBE2V1Q13404 147 aa8.41□□□□□ -1.06
RETREG3-212ENST00000593251 VPS25Q9BRG1 176 aa8.41□□□□□ -1.06
RETREG3-212ENST00000593251 A8MWP4 228 aa8.37□□□□□ -1.07
RETREG3-212ENST00000593251 J3KT08 172 aa8.36□□□□□ -1.07
RETREG3-212ENST00000593251 RBM3P98179 157 aaKnown RBP8.36□□□□□ -1.07
RETREG3-212ENST00000593251 Q8N9P0 234 aaPredicted RBP8.36□□□□□ -1.07
RETREG3-212ENST00000593251 K7ERJ3 54 aa8.35□□□□□ -1.07
RETREG3-212ENST00000593251 HSD52Q0P140 79 aa8.35□□□□□ -1.07
RETREG3-212ENST00000593251 DSCR8Q96T75 97 aa8.35□□□□□ -1.07
RETREG3-212ENST00000593251 C21orf62-AS1Q17RA5 79 aa8.34□□□□□ -1.07
RETREG3-212ENST00000593251 WFDC13Q8IUB5 93 aa8.34□□□□□ -1.07
RETREG3-212ENST00000593251 NDUFB1O75438 58 aa8.32□□□□□ -1.08
RETREG3-212ENST00000593251 LYRM7Q5U5X0 104 aa8.3□□□□□ -1.08
RETREG3-212ENST00000593251 SCGB1C2P0DMR2 95 aa8.29□□□□□ -1.08
RETREG3-212ENST00000593251 KRTAP6-3Q3LI67 103 aa8.29□□□□□ -1.08
RETREG3-212ENST00000593251 C9JAW5 83 aa8.28□□□□□ -1.08
RETREG3-212ENST00000593251 Q6ZQT0 140 aa8.26□□□□□ -1.09
RETREG3-212ENST00000593251 BAALC-AS2P0C853 105 aa8.25□□□□□ -1.09
RETREG3-212ENST00000593251 C8orf17Q9NRJ1 99 aa8.24□□□□□ -1.09
RETREG3-212ENST00000593251 IGKV3D-7A0A0C4DH55 119 aa8.18□□□□□ -1.1
RETREG3-212ENST00000593251 PYY3Q5JQD4 70 aa8.18□□□□□ -1.1
RETREG3-212ENST00000593251 UQCR10Q9UDW1 63 aa8.18□□□□□ -1.1
RETREG3-212ENST00000593251 A0A1B0GW54 56 aa8.17□□□□□ -1.1
RETREG3-212ENST00000593251 Q6ZVQ6 151 aa8.17□□□□□ -1.1
RETREG3-212ENST00000593251 H1FX-AS1Q4G0G2 97 aa8.16□□□□□ -1.1
RETREG3-212ENST00000593251 JMJD7-PLA2G4BH0Y9G9 81 aa8.15□□□□□ -1.1
RETREG3-212ENST00000593251 LOC110117498A0A087WWA1 95 aa8.12□□□□□ -1.11
RETREG3-212ENST00000593251 PDE6GP18545 87 aa8.12□□□□□ -1.11
RETREG3-212ENST00000593251 PRR15Q8IV56 129 aa8.11□□□□□ -1.11
RETREG3-212ENST00000593251 ATXN8Q156A1 80 aa8.1□□□□□ -1.11
RETREG3-212ENST00000593251 NREPQ16612 68 aa8.08□□□□□ -1.12
RETREG3-212ENST00000593251 TMEM254Q8TBM7 123 aa8.08□□□□□ -1.12
RETREG3-212ENST00000593251 MRPL34Q9BQ48 92 aaKnown RBP8.08□□□□□ -1.12
RETREG3-212ENST00000593251 MMP24-AS1A0A0U1RRL7 71 aa8.07□□□□□ -1.12
RETREG3-212ENST00000593251 NEBP20929 6669 aa8.06□□□□□ -1.12
RETREG3-212ENST00000593251 C14orf132Q9NPU4 83 aa8.05□□□□□ -1.12
RETREG3-212ENST00000593251 NDUFS5O43920 106 aa8.04□□□□□ -1.12
RETREG3-212ENST00000593251 IGKV2D-30A0A075B6S6 120 aa8.03□□□□□ -1.12
RETREG3-212ENST00000593251 IGKV2-30P06310 120 aa8.03□□□□□ -1.12
RETREG3-212ENST00000593251 hDV103S1A0JD37 113 aa8.02□□□□□ -1.13
RETREG3-212ENST00000593251 MUC12Q9UKN1 5478 aa8□□□□□ -1.13
RETREG3-212ENST00000593251 NAA38Q9BRA0 125 aaKnown RBP8□□□□□ -1.13
RETREG3-212ENST00000593251 A6NN06 94 aa7.98□□□□□ -1.13
RETREG3-212ENST00000593251 K7EQZ3 153 aa7.97□□□□□ -1.13
RETREG3-212ENST00000593251 M0R143 59 aa7.97□□□□□ -1.13
RETREG3-212ENST00000593251 Q5W150 140 aa7.97□□□□□ -1.13
RETREG3-212ENST00000593251 C7orf65Q6ZTY9 151 aa7.97□□□□□ -1.13
RETREG3-212ENST00000593251 MT1BP07438 61 aa7.94□□□□□ -1.14
RETREG3-212ENST00000593251 C4orf26Q17RF5 130 aa7.93□□□□□ -1.14
RETREG3-212ENST00000593251 FAM236AA0A1B0GUQ0 79 aa7.92□□□□□ -1.14
RETREG3-212ENST00000593251 FAM236BA0A1B0GV22 79 aa7.92□□□□□ -1.14
RETREG3-212ENST00000593251 C5orf47Q569G3 176 aa7.92□□□□□ -1.14
RETREG3-212ENST00000593251 BPY2O14599 106 aa7.89□□□□□ -1.15
RETREG3-212ENST00000593251 TMA7Q9Y2S6 64 aaKnown RBP7.89□□□□□ -1.15
RETREG3-212ENST00000593251 Q5VV11 94 aa7.88□□□□□ -1.15
RETREG3-212ENST00000593251 KRTAP20-1Q3LI63 56 aa7.87□□□□□ -1.15
RETREG3-212ENST00000593251 HCG22E2RYF7 251 aa7.84□□□□□ -1.15
RETREG3-212ENST00000593251 KRTAP19-8Q3LI54 63 aa7.84□□□□□ -1.15
RETREG3-212ENST00000593251 CASC2Q6XLA1 102 aa7.84□□□□□ -1.15
RETREG3-212ENST00000593251 Q8N9L7 120 aa7.82□□□□□ -1.16
RETREG3-212ENST00000593251 SPRR2GQ9BYE4 73 aa7.82□□□□□ -1.16
RETREG3-212ENST00000593251 KRTAP10-5P60370 271 aa7.81□□□□□ -1.16
RETREG3-212ENST00000593251 H3BT86 120 aa7.8□□□□□ -1.16
RETREG3-212ENST00000593251 CXCL6P80162 114 aa7.8□□□□□ -1.16
RETREG3-212ENST00000593251 KRTAP3-1Q9BYR8 98 aa7.8□□□□□ -1.16
RETREG3-212ENST00000593251 S4R3F8 94 aa7.8□□□□□ -1.16
RETREG3-212ENST00000593251 TSTD3H0UI37 97 aa7.78□□□□□ -1.16
RETREG3-212ENST00000593251 CSAG1Q6PB30 78 aa7.77□□□□□ -1.17
RETREG3-212ENST00000593251 KRTAP5-9P26371 169 aa7.76□□□□□ -1.17
RETREG3-212ENST00000593251 LCA10Q71F78 164 aa7.75□□□□□ -1.17
RETREG3-212ENST00000593251 BATFQ16520 125 aa7.74□□□□□ -1.17
RETREG3-212ENST00000593251 KMT2DO14686 5537 aa7.73□□□□□ -1.17
RETREG3-212ENST00000593251 MDN1Q9NU22 5596 aa7.72□□□□□ -1.17
RETREG3-212ENST00000593251 C1orf64Q8NEQ6 169 aa7.71□□□□□ -1.18
RETREG3-212ENST00000593251 C9orf118A6NHY6 69 aa7.7□□□□□ -1.18
RETREG3-212ENST00000593251 KLKP1Q107X0 134 aa7.69□□□□□ -1.18
RETREG3-212ENST00000593251 A0A1W2PPM0 123 aa7.66□□□□□ -1.18
RETREG3-212ENST00000593251 SMIM6P0DI80 62 aa7.64□□□□□ -1.19
RETREG3-212ENST00000593251 IMUPQ9GZP8 106 aa7.64□□□□□ -1.19
RETREG3-212ENST00000593251 TAX1BP3O14907 124 aa7.62□□□□□ -1.19
RETREG3-212ENST00000593251 UBL5Q9BZL1 73 aa7.62□□□□□ -1.19
RETREG3-212ENST00000593251 KRTAP3-3Q9BYR6 98 aa7.6□□□□□ -1.19
RETREG3-212ENST00000593251 TP53AIP1Q9HCN2 124 aa7.58□□□□□ -1.2
RETREG3-212ENST00000593251 KRTAP2-3P0C7H8 128 aa7.56□□□□□ -1.2
RETREG3-212ENST00000593251 SMCPP49901 116 aaPredicted RBP7.56□□□□□ -1.2
RETREG3-212ENST00000593251 KRTAP2-4Q9BYR9 128 aa7.56□□□□□ -1.2
RETREG3-212ENST00000593251 CRIPTQ9P021 101 aa7.54□□□□□ -1.2
RETREG3-212ENST00000593251 SPCS1Q9Y6A9 102 aa7.54□□□□□ -1.2
RETREG3-212ENST00000593251 A0A087WVE0 104 aa7.53□□□□□ -1.2
RETREG3-212ENST00000593251 SPRR2FQ96RM1 72 aa7.49□□□□□ -1.21
RETREG3-212ENST00000593251 SPRR2EP22531 72 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms