RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 LIMD2Q9BT23 127 aa7.75□□□□□ -1.17
VMP1-217ENST00000593168 IMUPQ9GZP8 106 aa7.74□□□□□ -1.17
VMP1-217ENST00000593168 J3KT08 172 aa7.73□□□□□ -1.17
VMP1-217ENST00000593168 Q96NJ1 140 aa7.72□□□□□ -1.17
VMP1-217ENST00000593168 LPAP08519 4548 aa7.71□□□□□ -1.17
VMP1-217ENST00000593168 LORP23490 312 aaPredicted RBP7.71□□□□□ -1.18
VMP1-217ENST00000593168 DSCR10P59022 87 aa7.7□□□□□ -1.18
VMP1-217ENST00000593168 DEFB116Q30KQ4 102 aa7.7□□□□□ -1.18
VMP1-217ENST00000593168 IGKV4-1P06312 121 aa7.67□□□□□ -1.18
VMP1-217ENST00000593168 A8MWP4 228 aa7.66□□□□□ -1.18
VMP1-217ENST00000593168 HIST1H4AP62805 103 aaKnown RBP7.66□□□□□ -1.18
VMP1-217ENST00000593168 C1orf195Q5TG92 126 aa7.66□□□□□ -1.18
VMP1-217ENST00000593168 NDUFB1O75438 58 aa7.64□□□□□ -1.19
VMP1-217ENST00000593168 PRR15Q8IV56 129 aa7.63□□□□□ -1.19
VMP1-217ENST00000593168 Q8N9L7 120 aa7.63□□□□□ -1.19
VMP1-217ENST00000593168 K7EQZ3 153 aa7.62□□□□□ -1.19
VMP1-217ENST00000593168 A0A087WVE0 104 aa7.61□□□□□ -1.19
VMP1-217ENST00000593168 SCGB1A1P11684 91 aa7.6□□□□□ -1.19
VMP1-217ENST00000593168 A0A1B0GVX0 72 aa7.59□□□□□ -1.19
VMP1-217ENST00000593168 MUC2Q02817 5179 aa7.58□□□□□ -1.2
VMP1-217ENST00000593168 KRTAP9-2Q9BYQ4 174 aa7.55□□□□□ -1.2
VMP1-217ENST00000593168 IGHV6-1A0A0B4J1U7 121 aa7.54□□□□□ -1.2
VMP1-217ENST00000593168 FAM236AA0A1B0GUQ0 79 aa7.54□□□□□ -1.2
VMP1-217ENST00000593168 FAM236BA0A1B0GV22 79 aa7.54□□□□□ -1.2
VMP1-217ENST00000593168 HCG22E2RYF7 251 aa7.54□□□□□ -1.2
VMP1-217ENST00000593168 C8orf87E5RJ46 101 aa7.54□□□□□ -1.2
VMP1-217ENST00000593168 C8orf17Q9NRJ1 99 aa7.54□□□□□ -1.2
VMP1-217ENST00000593168 FAT4Q6V0I7 4981 aa7.52□□□□□ -1.2
VMP1-217ENST00000593168 MMP24-AS1A0A0U1RRL7 71 aa7.52□□□□□ -1.21
VMP1-217ENST00000593168 CASC2Q6XLA1 102 aa7.5□□□□□ -1.21
VMP1-217ENST00000593168 FP248Q71RG6 208 aaPredicted RBP7.5□□□□□ -1.21
VMP1-217ENST00000593168 WFDC13Q8IUB5 93 aa7.5□□□□□ -1.21
VMP1-217ENST00000593168 RETNLBQ9BQ08 111 aa7.5□□□□□ -1.21
VMP1-217ENST00000593168 hDV103S1A0JD37 113 aa7.49□□□□□ -1.21
VMP1-217ENST00000593168 LINC00313P59037 77 aa7.49□□□□□ -1.21
VMP1-217ENST00000593168 NOTCH2NLQ7Z3S9 236 aa7.49□□□□□ -1.21
VMP1-217ENST00000593168 ATOX1O00244 68 aa7.48□□□□□ -1.21
VMP1-217ENST00000593168 TMEM254Q8TBM7 123 aa7.47□□□□□ -1.21
VMP1-217ENST00000593168 MRPL34Q9BQ48 92 aaKnown RBP7.45□□□□□ -1.22
VMP1-217ENST00000593168 SMIM20Q8N5G0 67 aa7.44□□□□□ -1.22
VMP1-217ENST00000593168 IGLV7-46A0A075B6I9 117 aa7.42□□□□□ -1.22
VMP1-217ENST00000593168 KRTAP16-1A8MUX0 517 aa7.42□□□□□ -1.22
VMP1-217ENST00000593168 KRTAP9-6A0A140TA67 174 aa7.41□□□□□ -1.22
VMP1-217ENST00000593168 OCR1Q9BZK8 76 aa7.41□□□□□ -1.22
VMP1-217ENST00000593168 TRAV7A0A075B6U4 112 aa7.4□□□□□ -1.22
VMP1-217ENST00000593168 ANAPC13Q9BS18 74 aa7.4□□□□□ -1.22
VMP1-217ENST00000593168 SERP2Q8N6R1 65 aa7.39□□□□□ -1.23
VMP1-217ENST00000593168 Q8N9P0 234 aaPredicted RBP7.39□□□□□ -1.23
VMP1-217ENST00000593168 A0A0U1RQV1 116 aa7.38□□□□□ -1.23
VMP1-217ENST00000593168 PRR4Q16378 134 aa7.38□□□□□ -1.23
VMP1-217ENST00000593168 TP53AIP1Q9HCN2 124 aa7.38□□□□□ -1.23
VMP1-217ENST00000593168 C9orf92A6NGG3 77 aa7.37□□□□□ -1.23
VMP1-217ENST00000593168 UQCRQO14949 82 aa7.36□□□□□ -1.23
VMP1-217ENST00000593168 NDUFS5O43920 106 aa7.35□□□□□ -1.23
VMP1-217ENST00000593168 KRTAP13-3Q3SY46 172 aa7.35□□□□□ -1.23
VMP1-217ENST00000593168 COX7CP15954 63 aa7.34□□□□□ -1.23
VMP1-217ENST00000593168 C20orf166-AS1Q96NR2 134 aa7.33□□□□□ -1.24
VMP1-217ENST00000593168 A8MUU9 505 aa7.32□□□□□ -1.24
VMP1-217ENST00000593168 PCP4P48539 62 aa7.32□□□□□ -1.24
VMP1-217ENST00000593168 TPRXLQ17RH7 258 aa7.31□□□□□ -1.24
VMP1-217ENST00000593168 C5orf47Q569G3 176 aa7.31□□□□□ -1.24
VMP1-217ENST00000593168 MUC17Q685J3 4493 aa7.31□□□□□ -1.24
VMP1-217ENST00000593168 Q75L30 129 aa7.28□□□□□ -1.24
VMP1-217ENST00000593168 TRAV22A0A0B4J277 110 aa7.26□□□□□ -1.25
VMP1-217ENST00000593168 MP68P56378 58 aa7.26□□□□□ -1.25
VMP1-217ENST00000593168 XP32Q5T750 250 aa7.26□□□□□ -1.25
VMP1-217ENST00000593168 Q5W150 140 aa7.25□□□□□ -1.25
VMP1-217ENST00000593168 H0Y9P7 68 aa7.24□□□□□ -1.25
VMP1-217ENST00000593168 H3BPC8 53 aa7.24□□□□□ -1.25
VMP1-217ENST00000593168 CCDC179H3BU77 68 aa7.23□□□□□ -1.25
VMP1-217ENST00000593168 C20orf197Q8N268 126 aa7.23□□□□□ -1.25
VMP1-217ENST00000593168 ZCCHC13Q8WW36 166 aaKnown RBP7.23□□□□□ -1.25
VMP1-217ENST00000593168 RPL37P61927 97 aaKnown RBP7.22□□□□□ -1.25
VMP1-217ENST00000593168 KLKP1Q107X0 134 aa7.2□□□□□ -1.26
VMP1-217ENST00000593168 LINC00208Q96KT6 92 aa7.2□□□□□ -1.26
VMP1-217ENST00000593168 ATP11AUNQ6ZP68 121 aa7.18□□□□□ -1.26
VMP1-217ENST00000593168 C1orf64Q8NEQ6 169 aa7.18□□□□□ -1.26
VMP1-217ENST00000593168 SNURFQ9Y675 71 aa7.17□□□□□ -1.26
VMP1-217ENST00000593168 LOC101927531A0A1B0GV80 90 aa7.16□□□□□ -1.26
VMP1-217ENST00000593168 NDUFC1O43677 76 aa7.13□□□□□ -1.27
VMP1-217ENST00000593168 IGKV2-30P06310 120 aa7.13□□□□□ -1.27
VMP1-217ENST00000593168 CYP4F30PQ9H0H9 118 aa7.12□□□□□ -1.27
VMP1-217ENST00000593168 CYSTM1Q9H1C7 97 aa7.11□□□□□ -1.27
VMP1-217ENST00000593168 IGKV2D-30A0A075B6S6 120 aa7.08□□□□□ -1.28
VMP1-217ENST00000593168 H7BZZ5 65 aa7.08□□□□□ -1.28
VMP1-217ENST00000593168 C7orf65Q6ZTY9 151 aa7.08□□□□□ -1.28
VMP1-217ENST00000593168 SEC61BP60468 96 aaKnown RBP7.07□□□□□ -1.28
VMP1-217ENST00000593168 PCOTHQ58A44 107 aa7.07□□□□□ -1.28
VMP1-217ENST00000593168 SPINK7P58062 85 aa7.06□□□□□ -1.28
VMP1-217ENST00000593168 CRCT1Q9UGL9 99 aa7.06□□□□□ -1.28
VMP1-217ENST00000593168 FSIP2Q5CZC0 6907 aa7.01□□□□□ -1.29
VMP1-217ENST00000593168 TMEM258P61165 79 aa7□□□□□ -1.29
VMP1-217ENST00000593168 SPANXA2-OT1Q8N9U9 137 aa7□□□□□ -1.29
VMP1-217ENST00000593168 HRES1P13985 223 aa6.99□□□□□ -1.29
VMP1-217ENST00000593168 KRTAP4-1Q9BYQ7 146 aa6.99□□□□□ -1.29
VMP1-217ENST00000593168 LOC100996750A0A140TA64 210 aa6.98□□□□□ -1.29
VMP1-217ENST00000593168 KRTAP4-6Q9BYQ5 205 aa6.98□□□□□ -1.29
VMP1-217ENST00000593168 ATP5EP56381 51 aaPredicted RBP6.94□□□□□ -1.3
VMP1-217ENST00000593168 FAM236DA0A1B0GTK5 79 aa6.93□□□□□ -1.3
VMP1-217ENST00000593168 FAM236CP0DP71 79 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 211.2 ms