RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 SCGB1C2P0DMR2 95 aa6.73□□□□□ -1.33
APOC1-209ENST00000592885 UBE2V1Q13404 147 aa6.73□□□□□ -1.33
APOC1-209ENST00000592885 TRACP01848 142 aa6.71□□□□□ -1.34
APOC1-209ENST00000592885 KRTAP9-8Q9BYQ0 159 aa6.71□□□□□ -1.34
APOC1-209ENST00000592885 LINC00472Q9H8W2 130 aa6.71□□□□□ -1.34
APOC1-209ENST00000592885 CCKP06307 115 aa6.7□□□□□ -1.34
APOC1-209ENST00000592885 FAM236DA0A1B0GTK5 79 aa6.69□□□□□ -1.34
APOC1-209ENST00000592885 FAM236CP0DP71 79 aa6.69□□□□□ -1.34
APOC1-209ENST00000592885 ATXN8Q156A1 80 aa6.69□□□□□ -1.34
APOC1-209ENST00000592885 A0A1B0GV72 72 aa6.68□□□□□ -1.34
APOC1-209ENST00000592885 RBM12B-AS1Q9P1G2 102 aa6.68□□□□□ -1.34
APOC1-209ENST00000592885 C8orf87E5RJ46 101 aa6.67□□□□□ -1.34
APOC1-209ENST00000592885 C21orf62-AS1Q17RA5 79 aa6.67□□□□□ -1.34
APOC1-209ENST00000592885 MPLKIPQ8TAP9 179 aa6.67□□□□□ -1.34
APOC1-209ENST00000592885 IGHV6-1A0A0B4J1U7 121 aa6.66□□□□□ -1.34
APOC1-209ENST00000592885 HRES1P13985 223 aa6.65□□□□□ -1.34
APOC1-209ENST00000592885 NOTCH2NLQ7Z3S9 236 aa6.65□□□□□ -1.34
APOC1-209ENST00000592885 PRO0461Q9UI25 63 aa6.65□□□□□ -1.34
APOC1-209ENST00000592885 A0A1B0GVX0 72 aa6.64□□□□□ -1.35
APOC1-209ENST00000592885 DEFB116Q30KQ4 102 aa6.64□□□□□ -1.35
APOC1-209ENST00000592885 F8W1H4 67 aa6.63□□□□□ -1.35
APOC1-209ENST00000592885 RBM3P98179 157 aaKnown RBP6.63□□□□□ -1.35
APOC1-209ENST00000592885 DSCR8Q96T75 97 aa6.63□□□□□ -1.35
APOC1-209ENST00000592885 C9JAW5 83 aa6.62□□□□□ -1.35
APOC1-209ENST00000592885 J3KT08 172 aa6.62□□□□□ -1.35
APOC1-209ENST00000592885 MT2AP02795 61 aa6.61□□□□□ -1.35
APOC1-209ENST00000592885 VPS25Q9BRG1 176 aa6.61□□□□□ -1.35
APOC1-209ENST00000592885 MTURNQ8N3F0 131 aa6.6□□□□□ -1.35
APOC1-209ENST00000592885 H3BT86 120 aa6.59□□□□□ -1.35
APOC1-209ENST00000592885 ZCCHC13Q8WW36 166 aaKnown RBP6.58□□□□□ -1.36
APOC1-209ENST00000592885 BAALC-AS2P0C853 105 aa6.56□□□□□ -1.36
APOC1-209ENST00000592885 USH2AO75445 5202 aa6.55□□□□□ -1.36
APOC1-209ENST00000592885 A0A1B0GW54 56 aa6.55□□□□□ -1.36
APOC1-209ENST00000592885 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.55□□□□□ -1.36
APOC1-209ENST00000592885 NDUFB1O75438 58 aa6.55□□□□□ -1.36
APOC1-209ENST00000592885 MT1FP04733 61 aa6.55□□□□□ -1.36
APOC1-209ENST00000592885 Q6ZQT0 140 aa6.55□□□□□ -1.36
APOC1-209ENST00000592885 SSPOA2VEC9 5147 aa6.53□□□□□ -1.36
APOC1-209ENST00000592885 LOC100996750A0A140TA64 210 aa6.53□□□□□ -1.36
APOC1-209ENST00000592885 ETDBQ3ZM63 59 aa6.53□□□□□ -1.36
APOC1-209ENST00000592885 Q8N9P0 234 aaPredicted RBP6.53□□□□□ -1.36
APOC1-209ENST00000592885 KRTAP4-6Q9BYQ5 205 aa6.53□□□□□ -1.36
APOC1-209ENST00000592885 JMJD7-PLA2G4BH0Y9G9 81 aa6.52□□□□□ -1.37
APOC1-209ENST00000592885 SPINK7P58062 85 aa6.52□□□□□ -1.37
APOC1-209ENST00000592885 KRTAP10-10P60014 251 aa6.52□□□□□ -1.37
APOC1-209ENST00000592885 KRTAP9-7A8MTY7 169 aa6.51□□□□□ -1.37
APOC1-209ENST00000592885 KRTAP9-3Q9BYQ3 159 aa6.51□□□□□ -1.37
APOC1-209ENST00000592885 LOC110117498A0A087WWA1 95 aa6.5□□□□□ -1.37
APOC1-209ENST00000592885 PDE6GP18545 87 aa6.5□□□□□ -1.37
APOC1-209ENST00000592885 A8MWP4 228 aa6.49□□□□□ -1.37
APOC1-209ENST00000592885 C8orf17Q9NRJ1 99 aa6.48□□□□□ -1.37
APOC1-209ENST00000592885 WFDC13Q8IUB5 93 aa6.45□□□□□ -1.38
APOC1-209ENST00000592885 KRTAP19-1Q8IUB9 90 aa6.45□□□□□ -1.38
APOC1-209ENST00000592885 IGKV3D-7A0A0C4DH55 119 aa6.44□□□□□ -1.38
APOC1-209ENST00000592885 J3QR89 54 aa6.43□□□□□ -1.38
APOC1-209ENST00000592885 K7ERU9 68 aa6.43□□□□□ -1.38
APOC1-209ENST00000592885 Q6ZVQ6 151 aa6.43□□□□□ -1.38
APOC1-209ENST00000592885 PRR15Q8IV56 129 aa6.42□□□□□ -1.38
APOC1-209ENST00000592885 C14orf132Q9NPU4 83 aa6.41□□□□□ -1.38
APOC1-209ENST00000592885 TMEM254Q8TBM7 123 aa6.4□□□□□ -1.38
APOC1-209ENST00000592885 LINC00846Q9NV44 126 aa6.4□□□□□ -1.38
APOC1-209ENST00000592885 FCGBPQ9Y6R7 5405 aaPredicted RBP6.4□□□□□ -1.39
APOC1-209ENST00000592885 NREPQ16612 68 aa6.39□□□□□ -1.39
APOC1-209ENST00000592885 MRPL34Q9BQ48 92 aaKnown RBP6.38□□□□□ -1.39
APOC1-209ENST00000592885 MMP24-AS1A0A0U1RRL7 71 aa6.37□□□□□ -1.39
APOC1-209ENST00000592885 FAM240AA0A1B0GVK7 77 aa6.36□□□□□ -1.39
APOC1-209ENST00000592885 ACYP1P07311 99 aa6.35□□□□□ -1.39
APOC1-209ENST00000592885 hDV103S1A0JD37 113 aa6.33□□□□□ -1.4
APOC1-209ENST00000592885 KRTAP19-6Q3LI70 58 aa6.33□□□□□ -1.4
APOC1-209ENST00000592885 H1FX-AS1Q4G0G2 97 aa6.32□□□□□ -1.4
APOC1-209ENST00000592885 K7EQZ3 153 aa6.31□□□□□ -1.4
APOC1-209ENST00000592885 NDUFS5O43920 106 aa6.3□□□□□ -1.4
APOC1-209ENST00000592885 C7orf65Q6ZTY9 151 aa6.28□□□□□ -1.4
APOC1-209ENST00000592885 BPY2O14599 106 aa6.27□□□□□ -1.41
APOC1-209ENST00000592885 MACF1Q9UPN3 7388 aaKnown RBP6.26□□□□□ -1.41
APOC1-209ENST00000592885 IGKV2D-30A0A075B6S6 120 aa6.24□□□□□ -1.41
APOC1-209ENST00000592885 IGKV2-30P06310 120 aa6.24□□□□□ -1.41
APOC1-209ENST00000592885 LINC00643Q86TS7 51 aa6.23□□□□□ -1.41
APOC1-209ENST00000592885 UBL5Q9BZL1 73 aa6.22□□□□□ -1.41
APOC1-209ENST00000592885 Q5W150 140 aa6.21□□□□□ -1.42
APOC1-209ENST00000592885 CASC2Q6XLA1 102 aa6.21□□□□□ -1.42
APOC1-209ENST00000592885 CXCL6P80162 114 aa6.19□□□□□ -1.42
APOC1-209ENST00000592885 HCG22E2RYF7 251 aa6.18□□□□□ -1.42
APOC1-209ENST00000592885 MT-ATP8P03928 68 aa6.18□□□□□ -1.42
APOC1-209ENST00000592885 ATP5EP2Q5VTU8 51 aa6.18□□□□□ -1.42
APOC1-209ENST00000592885 SYNE2Q8WXH0 6885 aaKnown RBP6.17□□□□□ -1.42
APOC1-209ENST00000592885 Q8N9L7 120 aa6.16□□□□□ -1.42
APOC1-209ENST00000592885 C4orf26Q17RF5 130 aa6.14□□□□□ -1.43
APOC1-209ENST00000592885 IMUPQ9GZP8 106 aa6.13□□□□□ -1.43
APOC1-209ENST00000592885 KRTAP6-3Q3LI67 103 aa6.11□□□□□ -1.43
APOC1-209ENST00000592885 KRTAP4-8Q9BYQ9 185 aa6.08□□□□□ -1.44
APOC1-209ENST00000592885 C5orf47Q569G3 176 aa6.07□□□□□ -1.44
APOC1-209ENST00000592885 S4R3F8 94 aa6.07□□□□□ -1.44
APOC1-209ENST00000592885 FAM236AA0A1B0GUQ0 79 aa6.06□□□□□ -1.44
APOC1-209ENST00000592885 FAM236BA0A1B0GV22 79 aa6.06□□□□□ -1.44
APOC1-209ENST00000592885 SCGB1A1P11684 91 aa6.06□□□□□ -1.44
APOC1-209ENST00000592885 H3BS24 57 aa6.05□□□□□ -1.44
APOC1-209ENST00000592885 HIST1H4AP62805 103 aaKnown RBP6.05□□□□□ -1.44
APOC1-209ENST00000592885 CSAG1Q6PB30 78 aa6.04□□□□□ -1.44
APOC1-209ENST00000592885 KRTAP3-1Q9BYR8 98 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 219.7 ms