RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 NDUFS5O43920 106 aa9.74□□□□□ -0.85
PRKCSH-217ENST00000592741 MPLKIPQ8TAP9 179 aa9.74□□□□□ -0.85
PRKCSH-217ENST00000592741 SPINK6Q6UWN8 80 aa9.73□□□□□ -0.85
PRKCSH-217ENST00000592741 KRTAP21-3Q3LHN1 58 aa9.72□□□□□ -0.85
PRKCSH-217ENST00000592741 A0A087X002 238 aa9.7□□□□□ -0.86
PRKCSH-217ENST00000592741 NOTCH2NLQ7Z3S9 236 aa9.7□□□□□ -0.86
PRKCSH-217ENST00000592741 PKD1P98161 4303 aa9.68□□□□□ -0.86
PRKCSH-217ENST00000592741 HYDINQ4G0P3 5121 aa9.66□□□□□ -0.86
PRKCSH-217ENST00000592741 FAT2Q9NYQ8 4349 aa9.65□□□□□ -0.86
PRKCSH-217ENST00000592741 KRTAP13-2Q52LG2 175 aa9.65□□□□□ -0.86
PRKCSH-217ENST00000592741 C8orf87E5RJ46 101 aa9.64□□□□□ -0.87
PRKCSH-217ENST00000592741 PCOTHQ58A44 107 aa9.64□□□□□ -0.87
PRKCSH-217ENST00000592741 IGLV7-46A0A075B6I9 117 aa9.63□□□□□ -0.87
PRKCSH-217ENST00000592741 Q1T7F1 81 aa9.63□□□□□ -0.87
PRKCSH-217ENST00000592741 LINC00336Q6ZUF6 198 aa9.63□□□□□ -0.87
PRKCSH-217ENST00000592741 LRP1BQ9NZR2 4599 aa9.59□□□□□ -0.87
PRKCSH-217ENST00000592741 KRTAP1-4P0C5Y4 121 aa9.58□□□□□ -0.88
PRKCSH-217ENST00000592741 LOC101927531A0A1B0GV80 90 aa9.56□□□□□ -0.88
PRKCSH-217ENST00000592741 C1orf195Q5TG92 126 aa9.56□□□□□ -0.88
PRKCSH-217ENST00000592741 LINC00313P59037 77 aa9.55□□□□□ -0.88
PRKCSH-217ENST00000592741 LIMD2Q9BT23 127 aa9.55□□□□□ -0.88
PRKCSH-217ENST00000592741 V9GYY9 64 aa9.55□□□□□ -0.88
PRKCSH-217ENST00000592741 PRO0628Q9UI54 55 aa9.54□□□□□ -0.88
PRKCSH-217ENST00000592741 COA5Q86WW8 74 aa9.53□□□□□ -0.88
PRKCSH-217ENST00000592741 Q5W150 140 aa9.53□□□□□ -0.88
PRKCSH-217ENST00000592741 KRTAP13-3Q3SY46 172 aa9.52□□□□□ -0.89
PRKCSH-217ENST00000592741 BRK1Q8WUW1 75 aa9.51□□□□□ -0.89
PRKCSH-217ENST00000592741 PLA2G1BP04054 148 aaKnown RBP9.5□□□□□ -0.89
PRKCSH-217ENST00000592741 C4orf48Q5BLP8 95 aa9.49□□□□□ -0.89
PRKCSH-217ENST00000592741 PSPHP1O15172 72 aa9.48□□□□□ -0.89
PRKCSH-217ENST00000592741 TYMSOSQ8TAI1 123 aa9.48□□□□□ -0.89
PRKCSH-217ENST00000592741 VPS13BQ7Z7G8 4022 aa9.48□□□□□ -0.89
PRKCSH-217ENST00000592741 Q8N9P0 234 aaPredicted RBP9.47□□□□□ -0.89
PRKCSH-217ENST00000592741 FAM229AH3BQW9 127 aa9.46□□□□□ -0.89
PRKCSH-217ENST00000592741 SACSQ9NZJ4 4579 aa9.44□□□□□ -0.9
PRKCSH-217ENST00000592741 SPINK1P00995 79 aa9.43□□□□□ -0.9
PRKCSH-217ENST00000592741 A8MUN3 132 aa9.42□□□□□ -0.9
PRKCSH-217ENST00000592741 KRTAP16-1A8MUX0 517 aa9.41□□□□□ -0.9
PRKCSH-217ENST00000592741 HRES1P13985 223 aa9.4□□□□□ -0.9
PRKCSH-217ENST00000592741 RETNLBQ9BQ08 111 aa9.38□□□□□ -0.91
PRKCSH-217ENST00000592741 Q5VV11 94 aa9.37□□□□□ -0.91
PRKCSH-217ENST00000592741 PRR15LQ9BU68 103 aa9.37□□□□□ -0.91
PRKCSH-217ENST00000592741 LINC00304Q8N9R0 145 aa9.36□□□□□ -0.91
PRKCSH-217ENST00000592741 IGKV2-30P06310 120 aa9.35□□□□□ -0.91
PRKCSH-217ENST00000592741 PRR26Q8N8Z3 221 aa9.35□□□□□ -0.91
PRKCSH-217ENST00000592741 RPS29P62273 56 aaKnown RBP9.34□□□□□ -0.91
PRKCSH-217ENST00000592741 PKHD1P08F94 4074 aa9.34□□□□□ -0.91
PRKCSH-217ENST00000592741 A0A1B0GVY2 172 aa9.34□□□□□ -0.91
PRKCSH-217ENST00000592741 SMR3BP02814 79 aaPredicted RBP9.33□□□□□ -0.92
PRKCSH-217ENST00000592741 SPAG11AQ6PDA7 123 aa9.33□□□□□ -0.92
PRKCSH-217ENST00000592741 DYNC1H1Q14204 4646 aaKnown RBP9.33□□□□□ -0.92
PRKCSH-217ENST00000592741 ACYP2P14621 99 aa9.31□□□□□ -0.92
PRKCSH-217ENST00000592741 CHKB-CPT1BH3BT56 60 aa9.29□□□□□ -0.92
PRKCSH-217ENST00000592741 LINC01558Q9Y6Z2 57 aa9.29□□□□□ -0.92
PRKCSH-217ENST00000592741 DMAC1Q96GE9 116 aa9.29□□□□□ -0.92
PRKCSH-217ENST00000592741 Q75L30 129 aa9.28□□□□□ -0.92
PRKCSH-217ENST00000592741 IGKV2D-30A0A075B6S6 120 aa9.24□□□□□ -0.93
PRKCSH-217ENST00000592741 KRTAP10-4P60372 401 aaPredicted RBP9.22□□□□□ -0.93
PRKCSH-217ENST00000592741 APOBP04114 4563 aaKnown RBP9.21□□□□□ -0.93
PRKCSH-217ENST00000592741 A6NED7 52 aa9.18□□□□□ -0.94
PRKCSH-217ENST00000592741 RYR2Q92736 4967 aa9.16□□□□□ -0.94
PRKCSH-217ENST00000592741 PKHD1L1Q86WI1 4243 aa9.14□□□□□ -0.95
PRKCSH-217ENST00000592741 C7orf65Q6ZTY9 151 aa9.13□□□□□ -0.95
PRKCSH-217ENST00000592741 FAT1Q14517 4588 aa9.13□□□□□ -0.95
PRKCSH-217ENST00000592741 A8MU10 97 aa9.11□□□□□ -0.95
PRKCSH-217ENST00000592741 C9orf92A6NGG3 77 aa9.09□□□□□ -0.95
PRKCSH-217ENST00000592741 LCA10Q71F78 164 aa9.08□□□□□ -0.96
PRKCSH-217ENST00000592741 CDC42SE1Q9NRR8 79 aa9.07□□□□□ -0.96
PRKCSH-217ENST00000592741 A8MUU9 505 aa9.07□□□□□ -0.96
PRKCSH-217ENST00000592741 C20orf166-AS1Q96NR2 134 aa9.07□□□□□ -0.96
PRKCSH-217ENST00000592741 SPINK7P58062 85 aa9.05□□□□□ -0.96
PRKCSH-217ENST00000592741 A0A1B0GU69 56 aa9.01□□□□□ -0.97
PRKCSH-217ENST00000592741 ATP11AUNQ6ZP68 121 aa9.01□□□□□ -0.97
PRKCSH-217ENST00000592741 SPTSSBQ8NFR3 76 aa9□□□□□ -0.97
PRKCSH-217ENST00000592741 PMAIP1Q13794 54 aa8.98□□□□□ -0.97
PRKCSH-217ENST00000592741 Q8N1X5 172 aa8.98□□□□□ -0.97
PRKCSH-217ENST00000592741 KMT2CQ8NEZ4 4911 aaKnown RBP8.98□□□□□ -0.97
PRKCSH-217ENST00000592741 Q5VSD8 79 aa8.92□□□□□ -0.98
PRKCSH-217ENST00000592741 KRTAP10-8P60410 259 aa8.89□□□□□ -0.99
PRKCSH-217ENST00000592741 FLG2Q5D862 2391 aaPredicted RBP8.87□□□□□ -0.99
PRKCSH-217ENST00000592741 A6NN06 94 aa8.84□□□□□ -0.99
PRKCSH-217ENST00000592741 TNXBP22105 4242 aa8.84□□□□□ -0.99
PRKCSH-217ENST00000592741 FAT3Q8TDW7 4589 aa8.84□□□□□ -1
PRKCSH-217ENST00000592741 HSPG2P98160 4391 aa8.83□□□□□ -1
PRKCSH-217ENST00000592741 UQCR11O14957 56 aa8.81□□□□□ -1
PRKCSH-217ENST00000592741 SPATA8Q6RVD6 105 aa8.8□□□□□ -1
PRKCSH-217ENST00000592741 KRTAP3-1Q9BYR8 98 aa8.8□□□□□ -1
PRKCSH-217ENST00000592741 SEC61GP60059 68 aa8.79□□□□□ -1
PRKCSH-217ENST00000592741 MIR22HGQ0VDD5 57 aa8.78□□□□□ -1
PRKCSH-217ENST00000592741 LRP1Q07954 4544 aaKnown RBP8.77□□□□□ -1
PRKCSH-217ENST00000592741 KTN1-AS1Q86SY8 53 aa8.77□□□□□ -1.01
PRKCSH-217ENST00000592741 RYR1P21817 5038 aa8.77□□□□□ -1.01
PRKCSH-217ENST00000592741 COX6B2Q6YFQ2 88 aa8.74□□□□□ -1.01
PRKCSH-217ENST00000592741 RYR3Q15413 4870 aa8.73□□□□□ -1.01
PRKCSH-217ENST00000592741 RPL37P61927 97 aaKnown RBP8.71□□□□□ -1.01
PRKCSH-217ENST00000592741 XP32Q5T750 250 aa8.67□□□□□ -1.02
PRKCSH-217ENST00000592741 KRTAP17-1Q9BYP8 105 aa8.67□□□□□ -1.02
PRKCSH-217ENST00000592741 MT1HL1P0DM35 61 aa8.62□□□□□ -1.03
PRKCSH-217ENST00000592741 DMBT1Q9UGM3 2413 aaPredicted RBP8.56□□□□□ -1.04
PRKCSH-217ENST00000592741 KIAA1109Q2LD37 5005 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms