RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 IGHV6-1A0A0B4J1U7 121 aa9.4□□□□□ -0.9
CCDC43-205ENST00000592333 MT2AP02795 61 aa9.4□□□□□ -0.9
CCDC43-205ENST00000592333 USH2AO75445 5202 aa9.39□□□□□ -0.91
CCDC43-205ENST00000592333 DEFB116Q30KQ4 102 aa9.38□□□□□ -0.91
CCDC43-205ENST00000592333 MTURNQ8N3F0 131 aa9.38□□□□□ -0.91
CCDC43-205ENST00000592333 A0A1B0GVX0 72 aa9.37□□□□□ -0.91
CCDC43-205ENST00000592333 KRTAP19-1Q8IUB9 90 aa9.37□□□□□ -0.91
CCDC43-205ENST00000592333 SSPOA2VEC9 5147 aa9.36□□□□□ -0.91
CCDC43-205ENST00000592333 A0A1B0GV72 72 aa9.36□□□□□ -0.91
CCDC43-205ENST00000592333 RBM3P98179 157 aaKnown RBP9.36□□□□□ -0.91
CCDC43-205ENST00000592333 J3KT08 172 aa9.35□□□□□ -0.91
CCDC43-205ENST00000592333 K7ERJ3 54 aa9.35□□□□□ -0.91
CCDC43-205ENST00000592333 DSCR8Q96T75 97 aa9.35□□□□□ -0.91
CCDC43-205ENST00000592333 KRTAP9-7A8MTY7 169 aa9.33□□□□□ -0.92
CCDC43-205ENST00000592333 PYY3Q5JQD4 70 aa9.32□□□□□ -0.92
CCDC43-205ENST00000592333 MT1FP04733 61 aa9.31□□□□□ -0.92
CCDC43-205ENST00000592333 ZCCHC13Q8WW36 166 aaKnown RBP9.3□□□□□ -0.92
CCDC43-205ENST00000592333 KRTAP9-3Q9BYQ3 159 aa9.3□□□□□ -0.92
CCDC43-205ENST00000592333 KRTAP10-10P60014 251 aa9.29□□□□□ -0.92
CCDC43-205ENST00000592333 VPS25Q9BRG1 176 aa9.29□□□□□ -0.92
CCDC43-205ENST00000592333 UQCR10Q9UDW1 63 aa9.29□□□□□ -0.92
CCDC43-205ENST00000592333 SCGB1C2P0DMR2 95 aa9.28□□□□□ -0.92
CCDC43-205ENST00000592333 A0A1B0GW54 56 aa9.27□□□□□ -0.93
CCDC43-205ENST00000592333 C9JAW5 83 aa9.27□□□□□ -0.93
CCDC43-205ENST00000592333 NDUFB1O75438 58 aa9.26□□□□□ -0.93
CCDC43-205ENST00000592333 Q8N9P0 234 aaPredicted RBP9.26□□□□□ -0.93
CCDC43-205ENST00000592333 SPINK7P58062 85 aa9.25□□□□□ -0.93
CCDC43-205ENST00000592333 Q6ZQT0 140 aa9.25□□□□□ -0.93
CCDC43-205ENST00000592333 BAALC-AS2P0C853 105 aa9.23□□□□□ -0.93
CCDC43-205ENST00000592333 KRTAP9-9Q9BYP9 154 aa9.22□□□□□ -0.93
CCDC43-205ENST00000592333 KRTAP9-4Q9BYQ2 154 aa9.22□□□□□ -0.93
CCDC43-205ENST00000592333 FCGBPQ9Y6R7 5405 aaPredicted RBP9.19□□□□□ -0.94
CCDC43-205ENST00000592333 JMJD7-PLA2G4BH0Y9G9 81 aa9.19□□□□□ -0.94
CCDC43-205ENST00000592333 PDE6GP18545 87 aa9.18□□□□□ -0.94
CCDC43-205ENST00000592333 A8MWP4 228 aa9.17□□□□□ -0.94
CCDC43-205ENST00000592333 LINC00846Q9NV44 126 aa9.16□□□□□ -0.94
CCDC43-205ENST00000592333 LOC110117498A0A087WWA1 95 aa9.15□□□□□ -0.94
CCDC43-205ENST00000592333 C8orf17Q9NRJ1 99 aa9.15□□□□□ -0.94
CCDC43-205ENST00000592333 ATXN8Q156A1 80 aa9.12□□□□□ -0.95
CCDC43-205ENST00000592333 LYRM7Q5U5X0 104 aa9.11□□□□□ -0.95
CCDC43-205ENST00000592333 WFDC13Q8IUB5 93 aa9.1□□□□□ -0.95
CCDC43-205ENST00000592333 IGKV3D-7A0A0C4DH55 119 aa9.09□□□□□ -0.95
CCDC43-205ENST00000592333 KRTAP4-8A0A0G2JLE6 195 aa9.09□□□□□ -0.95
CCDC43-205ENST00000592333 Q6ZVQ6 151 aa9.08□□□□□ -0.96
CCDC43-205ENST00000592333 M0R143 59 aa9.06□□□□□ -0.96
CCDC43-205ENST00000592333 PRR15Q8IV56 129 aa9.06□□□□□ -0.96
CCDC43-205ENST00000592333 MACF1Q9UPN3 7388 aaKnown RBP9.04□□□□□ -0.96
CCDC43-205ENST00000592333 KRTAP19-6Q3LI70 58 aa9.04□□□□□ -0.96
CCDC43-205ENST00000592333 NREPQ16612 68 aa9.02□□□□□ -0.97
CCDC43-205ENST00000592333 TMEM254Q8TBM7 123 aa9.02□□□□□ -0.97
CCDC43-205ENST00000592333 MRPL34Q9BQ48 92 aaKnown RBP9□□□□□ -0.97
CCDC43-205ENST00000592333 C14orf132Q9NPU4 83 aa9□□□□□ -0.97
CCDC43-205ENST00000592333 MMP24-AS1A0A0U1RRL7 71 aa8.97□□□□□ -0.97
CCDC43-205ENST00000592333 H1FX-AS1Q4G0G2 97 aa8.97□□□□□ -0.97
CCDC43-205ENST00000592333 TMA7Q9Y2S6 64 aaKnown RBP8.95□□□□□ -0.98
CCDC43-205ENST00000592333 hDV103S1A0JD37 113 aa8.94□□□□□ -0.98
CCDC43-205ENST00000592333 NAA38Q9BRA0 125 aaKnown RBP8.93□□□□□ -0.98
CCDC43-205ENST00000592333 SYNE2Q8WXH0 6885 aaKnown RBP8.93□□□□□ -0.98
CCDC43-205ENST00000592333 K7EQZ3 153 aa8.87□□□□□ -0.99
CCDC43-205ENST00000592333 NDUFS5O43920 106 aa8.87□□□□□ -0.99
CCDC43-205ENST00000592333 LCE1DQ5T752 114 aa8.87□□□□□ -0.99
CCDC43-205ENST00000592333 H3BT86 120 aa8.85□□□□□ -0.99
CCDC43-205ENST00000592333 C7orf65Q6ZTY9 151 aa8.85□□□□□ -0.99
CCDC43-205ENST00000592333 BPY2O14599 106 aa8.83□□□□□ -1
CCDC43-205ENST00000592333 SMIM6P0DI80 62 aa8.81□□□□□ -1
CCDC43-205ENST00000592333 IGKV2D-30A0A075B6S6 120 aa8.8□□□□□ -1
CCDC43-205ENST00000592333 IGKV2-30P06310 120 aa8.8□□□□□ -1
CCDC43-205ENST00000592333 Q5W150 140 aa8.78□□□□□ -1
CCDC43-205ENST00000592333 KRTAP4-7Q9BYR0 210 aa8.77□□□□□ -1.01
CCDC43-205ENST00000592333 KRTAP6-3Q3LI67 103 aa8.76□□□□□ -1.01
CCDC43-205ENST00000592333 C9orf118A6NHY6 69 aa8.75□□□□□ -1.01
CCDC43-205ENST00000592333 TSTD3H0UI37 97 aa8.75□□□□□ -1.01
CCDC43-205ENST00000592333 CASC2Q6XLA1 102 aa8.74□□□□□ -1.01
CCDC43-205ENST00000592333 CXCL6P80162 114 aa8.73□□□□□ -1.01
CCDC43-205ENST00000592333 KRTAP19-4Q3LI73 84 aa8.73□□□□□ -1.01
CCDC43-205ENST00000592333 A0A1W2PPM0 123 aa8.71□□□□□ -1.02
CCDC43-205ENST00000592333 BATFQ16520 125 aa8.71□□□□□ -1.02
CCDC43-205ENST00000592333 HCG22E2RYF7 251 aa8.7□□□□□ -1.02
CCDC43-205ENST00000592333 C4orf26Q17RF5 130 aa8.68□□□□□ -1.02
CCDC43-205ENST00000592333 TAX1BP3O14907 124 aa8.66□□□□□ -1.02
CCDC43-205ENST00000592333 Q8N9L7 120 aa8.65□□□□□ -1.02
CCDC43-205ENST00000592333 H3BS24 57 aa8.6□□□□□ -1.03
CCDC43-205ENST00000592333 KRTAP4-9Q9BYQ8 210 aa8.6□□□□□ -1.03
CCDC43-205ENST00000592333 UBL5Q9BZL1 73 aa8.59□□□□□ -1.03
CCDC43-205ENST00000592333 C5orf47Q569G3 176 aa8.58□□□□□ -1.04
CCDC43-205ENST00000592333 CSAG1Q6PB30 78 aa8.58□□□□□ -1.04
CCDC43-205ENST00000592333 FAM236AA0A1B0GUQ0 79 aa8.57□□□□□ -1.04
CCDC43-205ENST00000592333 FAM236BA0A1B0GV22 79 aa8.57□□□□□ -1.04
CCDC43-205ENST00000592333 LCE4AQ5TA78 99 aa8.56□□□□□ -1.04
CCDC43-205ENST00000592333 KRTAP3-1Q9BYR8 98 aa8.56□□□□□ -1.04
CCDC43-205ENST00000592333 S4R3F8 94 aa8.56□□□□□ -1.04
CCDC43-205ENST00000592333 SPCS1Q9Y6A9 102 aa8.55□□□□□ -1.04
CCDC43-205ENST00000592333 SPRR2GQ9BYE4 73 aa8.54□□□□□ -1.04
CCDC43-205ENST00000592333 Q5VV11 94 aa8.53□□□□□ -1.04
CCDC43-205ENST00000592333 C1orf64Q8NEQ6 169 aa8.53□□□□□ -1.04
CCDC43-205ENST00000592333 TP53AIP1Q9HCN2 124 aa8.53□□□□□ -1.04
CCDC43-205ENST00000592333 A6NN06 94 aa8.52□□□□□ -1.05
CCDC43-205ENST00000592333 KRTAP19-8Q3LI54 63 aa8.51□□□□□ -1.05
CCDC43-205ENST00000592333 MT1BP07438 61 aa8.5□□□□□ -1.05
CCDC43-205ENST00000592333 LCA10Q71F78 164 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms