RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 KRTAP9-6A0A140TA67 174 aa7.32□□□□□ -1.24
CLIP3-205ENST00000592017 C21orf62-AS1Q17RA5 79 aa7.32□□□□□ -1.24
CLIP3-205ENST00000592017 A8MUU9 505 aa7.31□□□□□ -1.24
CLIP3-205ENST00000592017 LCE2DQ5TA82 110 aaPredicted RBP7.31□□□□□ -1.24
CLIP3-205ENST00000592017 PDE6GP18545 87 aa7.3□□□□□ -1.24
CLIP3-205ENST00000592017 NOTCH2NLQ7Z3S9 236 aa7.3□□□□□ -1.24
CLIP3-205ENST00000592017 H3BT86 120 aa7.29□□□□□ -1.24
CLIP3-205ENST00000592017 A0A1B0GVX0 72 aa7.28□□□□□ -1.24
CLIP3-205ENST00000592017 SPCS1Q9Y6A9 102 aa7.28□□□□□ -1.24
CLIP3-205ENST00000592017 FSIP2Q5CZC0 6907 aa7.28□□□□□ -1.24
CLIP3-205ENST00000592017 KRTAP16-1A8MUX0 517 aa7.27□□□□□ -1.25
CLIP3-205ENST00000592017 J3KT08 172 aa7.27□□□□□ -1.25
CLIP3-205ENST00000592017 COX6B2Q6YFQ2 88 aa7.27□□□□□ -1.25
CLIP3-205ENST00000592017 COL5A1-AS1Q5SY13 56 aa7.26□□□□□ -1.25
CLIP3-205ENST00000592017 FLGP20930 4061 aaPredicted RBP7.26□□□□□ -1.25
CLIP3-205ENST00000592017 C8orf87E5RJ46 101 aa7.25□□□□□ -1.25
CLIP3-205ENST00000592017 A0A1B0GW54 56 aa7.24□□□□□ -1.25
CLIP3-205ENST00000592017 NDUFB1O75438 58 aa7.23□□□□□ -1.25
CLIP3-205ENST00000592017 LORP23490 312 aaPredicted RBP7.22□□□□□ -1.25
CLIP3-205ENST00000592017 KRTAP10-6P60371 365 aaPredicted RBP7.21□□□□□ -1.26
CLIP3-205ENST00000592017 NREPQ16612 68 aa7.21□□□□□ -1.26
CLIP3-205ENST00000592017 A8MWP4 228 aa7.2□□□□□ -1.26
CLIP3-205ENST00000592017 IGKV3D-7A0A0C4DH55 119 aa7.17□□□□□ -1.26
CLIP3-205ENST00000592017 K7EP34 96 aa7.17□□□□□ -1.26
CLIP3-205ENST00000592017 M0R2T5 61 aa7.17□□□□□ -1.26
CLIP3-205ENST00000592017 SMCPP49901 116 aaPredicted RBP7.17□□□□□ -1.26
CLIP3-205ENST00000592017 C8orf17Q9NRJ1 99 aa7.17□□□□□ -1.26
CLIP3-205ENST00000592017 CRCT1Q9UGL9 99 aa7.14□□□□□ -1.27
CLIP3-205ENST00000592017 PRR15Q8IV56 129 aa7.13□□□□□ -1.27
CLIP3-205ENST00000592017 PRO0461Q9UI25 63 aa7.13□□□□□ -1.27
CLIP3-205ENST00000592017 Q6ZVQ6 151 aa7.11□□□□□ -1.27
CLIP3-205ENST00000592017 ZCCHC13Q8WW36 166 aaKnown RBP7.11□□□□□ -1.27
CLIP3-205ENST00000592017 K7EQZ3 153 aa7.1□□□□□ -1.27
CLIP3-205ENST00000592017 BPY2O14599 106 aa7.1□□□□□ -1.27
CLIP3-205ENST00000592017 GTF2H5Q6ZYL4 71 aa7.09□□□□□ -1.27
CLIP3-205ENST00000592017 Q8N9P0 234 aaPredicted RBP7.09□□□□□ -1.27
CLIP3-205ENST00000592017 MMP24-AS1A0A0U1RRL7 71 aa7.08□□□□□ -1.28
CLIP3-205ENST00000592017 FAM236DA0A1B0GTK5 79 aa7.08□□□□□ -1.28
CLIP3-205ENST00000592017 FAM236CP0DP71 79 aa7.08□□□□□ -1.28
CLIP3-205ENST00000592017 HRES1P13985 223 aa7.05□□□□□ -1.28
CLIP3-205ENST00000592017 TMEM254Q8TBM7 123 aa7.05□□□□□ -1.28
CLIP3-205ENST00000592017 MRPL34Q9BQ48 92 aaKnown RBP7.05□□□□□ -1.28
CLIP3-205ENST00000592017 RBM12B-AS1Q9P1G2 102 aa7.05□□□□□ -1.28
CLIP3-205ENST00000592017 hDV103S1A0JD37 113 aa7.04□□□□□ -1.28
CLIP3-205ENST00000592017 Q8N9L7 120 aa7.04□□□□□ -1.28
CLIP3-205ENST00000592017 NDUFS5O43920 106 aa7.03□□□□□ -1.28
CLIP3-205ENST00000592017 LINC00846Q9NV44 126 aa7.03□□□□□ -1.28
CLIP3-205ENST00000592017 A0A1B0GV90 55 aa7.02□□□□□ -1.29
CLIP3-205ENST00000592017 SPINK7P58062 85 aa7.02□□□□□ -1.29
CLIP3-205ENST00000592017 UBL5Q9BZL1 73 aa7.02□□□□□ -1.29
CLIP3-205ENST00000592017 F8W1H4 67 aa7.01□□□□□ -1.29
CLIP3-205ENST00000592017 ETDBQ3ZM63 59 aa7□□□□□ -1.29
CLIP3-205ENST00000592017 WFDC13Q8IUB5 93 aa7□□□□□ -1.29
CLIP3-205ENST00000592017 MPLKIPQ8TAP9 179 aa7□□□□□ -1.29
CLIP3-205ENST00000592017 CASC2Q6XLA1 102 aa6.97□□□□□ -1.29
CLIP3-205ENST00000592017 KRTAP9-8Q9BYQ0 159 aa6.97□□□□□ -1.29
CLIP3-205ENST00000592017 USH2AO75445 5202 aa6.94□□□□□ -1.3
CLIP3-205ENST00000592017 HCG22E2RYF7 251 aa6.93□□□□□ -1.3
CLIP3-205ENST00000592017 IGKV2D-30A0A075B6S6 120 aa6.89□□□□□ -1.31
CLIP3-205ENST00000592017 IGKV2-30P06310 120 aa6.89□□□□□ -1.31
CLIP3-205ENST00000592017 SSPOA2VEC9 5147 aa6.89□□□□□ -1.31
CLIP3-205ENST00000592017 Q5W150 140 aa6.88□□□□□ -1.31
CLIP3-205ENST00000592017 MT2AP02795 61 aa6.86□□□□□ -1.31
CLIP3-205ENST00000592017 C7orf65Q6ZTY9 151 aa6.86□□□□□ -1.31
CLIP3-205ENST00000592017 CXCL6P80162 114 aa6.85□□□□□ -1.31
CLIP3-205ENST00000592017 MT1FP04733 61 aa6.8□□□□□ -1.32
CLIP3-205ENST00000592017 ACYP1P07311 99 aa6.8□□□□□ -1.32
CLIP3-205ENST00000592017 FAM240AA0A1B0GVK7 77 aa6.77□□□□□ -1.33
CLIP3-205ENST00000592017 H1FX-AS1Q4G0G2 97 aa6.75□□□□□ -1.33
CLIP3-205ENST00000592017 KRTAP9-3Q9BYQ3 159 aa6.75□□□□□ -1.33
CLIP3-205ENST00000592017 LCE2BO14633 110 aa6.74□□□□□ -1.33
CLIP3-205ENST00000592017 KRTAP10-10P60014 251 aa6.74□□□□□ -1.33
CLIP3-205ENST00000592017 C4orf26Q17RF5 130 aa6.74□□□□□ -1.33
CLIP3-205ENST00000592017 ATP5EP2Q5VTU8 51 aa6.74□□□□□ -1.33
CLIP3-205ENST00000592017 TP53AIP1Q9HCN2 124 aa6.74□□□□□ -1.33
CLIP3-205ENST00000592017 HIST1H4AP62805 103 aaKnown RBP6.73□□□□□ -1.33
CLIP3-205ENST00000592017 FCGBPQ9Y6R7 5405 aaPredicted RBP6.72□□□□□ -1.33
CLIP3-205ENST00000592017 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.65□□□□□ -1.34
CLIP3-205ENST00000592017 LINC00643Q86TS7 51 aa6.65□□□□□ -1.34
CLIP3-205ENST00000592017 A0A087WVE0 104 aa6.64□□□□□ -1.35
CLIP3-205ENST00000592017 TRAV22A0A0B4J277 110 aa6.64□□□□□ -1.35
CLIP3-205ENST00000592017 KRTAP19-1Q8IUB9 90 aa6.63□□□□□ -1.35
CLIP3-205ENST00000592017 C1orf64Q8NEQ6 169 aa6.62□□□□□ -1.35
CLIP3-205ENST00000592017 J3QR89 54 aa6.6□□□□□ -1.35
CLIP3-205ENST00000592017 K7ERU9 68 aa6.6□□□□□ -1.35
CLIP3-205ENST00000592017 KRTAP3-1Q9BYR8 98 aa6.59□□□□□ -1.35
CLIP3-205ENST00000592017 CYP4F30PQ9H0H9 118 aa6.59□□□□□ -1.35
CLIP3-205ENST00000592017 LOC101927531A0A1B0GV80 90 aa6.58□□□□□ -1.36
CLIP3-205ENST00000592017 UQCRQO14949 82 aa6.58□□□□□ -1.36
CLIP3-205ENST00000592017 S4R3F8 94 aa6.58□□□□□ -1.36
CLIP3-205ENST00000592017 KRTAP9-7A8MTY7 169 aa6.57□□□□□ -1.36
CLIP3-205ENST00000592017 H0Y9P7 68 aa6.57□□□□□ -1.36
CLIP3-205ENST00000592017 C5orf47Q569G3 176 aa6.57□□□□□ -1.36
CLIP3-205ENST00000592017 ATOX1O00244 68 aa6.54□□□□□ -1.36
CLIP3-205ENST00000592017 LCA10Q71F78 164 aa6.52□□□□□ -1.37
CLIP3-205ENST00000592017 KRTAP19-6Q3LI70 58 aa6.49□□□□□ -1.37
CLIP3-205ENST00000592017 CSAG1Q6PB30 78 aa6.48□□□□□ -1.37
CLIP3-205ENST00000592017 MACF1Q9UPN3 7388 aaKnown RBP6.48□□□□□ -1.37
CLIP3-205ENST00000592017 LINC00208Q96KT6 92 aa6.47□□□□□ -1.37
CLIP3-205ENST00000592017 SYNE2Q8WXH0 6885 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms