RNA–Protein interactions for RNA: ENST00000591416.5

MBD1-224, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene MBD1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-224ENST00000591416 ZFHX4Q86UP3 3567 aa9.09□□□□□ -0.95
MBD1-224ENST00000591416 SPINK7P58062 85 aa9.06□□□□□ -0.96
MBD1-224ENST00000591416 A0A0D9SG42 100 aa9.04□□□□□ -0.96
MBD1-224ENST00000591416 SEC61BP60468 96 aaKnown RBP9.04□□□□□ -0.96
MBD1-224ENST00000591416 MIR22HGQ0VDD5 57 aa9.04□□□□□ -0.96
MBD1-224ENST00000591416 ASB16-AS1Q495Z4 193 aa9.04□□□□□ -0.96
MBD1-224ENST00000591416 KRTAP29-1A8MX34 341 aaPredicted RBP9.02□□□□□ -0.97
MBD1-224ENST00000591416 RPS29P62273 56 aaKnown RBP9.02□□□□□ -0.97
MBD1-224ENST00000591416 KRTAP13-2Q52LG2 175 aa9□□□□□ -0.97
MBD1-224ENST00000591416 TENM2Q9NT68 2774 aa8.99□□□□□ -0.97
MBD1-224ENST00000591416 NBPF19A0A087WUL8 3843 aa8.98□□□□□ -0.97
MBD1-224ENST00000591416 CYSTM1Q9H1C7 97 aa8.97□□□□□ -0.97
MBD1-224ENST00000591416 SMG1Q96Q15 3661 aaKnown RBP8.96□□□□□ -0.97
MBD1-224ENST00000591416 OXTP01178 125 aa8.96□□□□□ -0.98
MBD1-224ENST00000591416 SPINT4Q6UDR6 99 aa8.95□□□□□ -0.98
MBD1-224ENST00000591416 VWFP04275 2813 aa8.94□□□□□ -0.98
MBD1-224ENST00000591416 Q5XG85 94 aa8.94□□□□□ -0.98
MBD1-224ENST00000591416 FBN1P35555 2871 aaKnown RBP8.94□□□□□ -0.98
MBD1-224ENST00000591416 NOTCH2NLQ7Z3S9 236 aa8.93□□□□□ -0.98
MBD1-224ENST00000591416 PKD1L1Q8TDX9 2849 aa8.92□□□□□ -0.98
MBD1-224ENST00000591416 Q1T7F1 81 aa8.91□□□□□ -0.98
MBD1-224ENST00000591416 CSAG1Q6PB30 78 aa8.91□□□□□ -0.98
MBD1-224ENST00000591416 S4R3F8 94 aa8.87□□□□□ -0.99
MBD1-224ENST00000591416 M0R2T5 61 aa8.87□□□□□ -0.99
MBD1-224ENST00000591416 ZFHX3Q15911 3703 aa8.85□□□□□ -0.99
MBD1-224ENST00000591416 CRIPTQ9P021 101 aa8.84□□□□□ -0.99
MBD1-224ENST00000591416 A0A1B0GU33 70 aa8.83□□□□□ -1
MBD1-224ENST00000591416 LINC01558Q9Y6Z2 57 aa8.83□□□□□ -1
MBD1-224ENST00000591416 DMAC1Q96GE9 116 aa8.82□□□□□ -1
MBD1-224ENST00000591416 TGP01266 2768 aa8.81□□□□□ -1
MBD1-224ENST00000591416 CDC42SE1Q9NRR8 79 aa8.81□□□□□ -1
MBD1-224ENST00000591416 Q75L30 129 aa8.75□□□□□ -1.01
MBD1-224ENST00000591416 KRTAP1-4P0C5Y4 121 aa8.75□□□□□ -1.01
MBD1-224ENST00000591416 SPENQ96T58 3664 aaKnown RBP8.71□□□□□ -1.02
MBD1-224ENST00000591416 CSMD1Q96PZ7 3565 aa8.7□□□□□ -1.02
MBD1-224ENST00000591416 ANK3Q12955 4377 aaKnown RBP8.7□□□□□ -1.02
MBD1-224ENST00000591416 CSMD2Q7Z408 3487 aa8.67□□□□□ -1.02
MBD1-224ENST00000591416 BSNQ9UPA5 3926 aa8.66□□□□□ -1.02
MBD1-224ENST00000591416 CAMK2N1Q7Z7J9 78 aa8.66□□□□□ -1.02
MBD1-224ENST00000591416 RPL37P61927 97 aaKnown RBP8.65□□□□□ -1.02
MBD1-224ENST00000591416 KTN1-AS1Q86SY8 53 aa8.64□□□□□ -1.03
MBD1-224ENST00000591416 R4GN34 69 aa8.63□□□□□ -1.03
MBD1-224ENST00000591416 Q5VV11 94 aa8.61□□□□□ -1.03
MBD1-224ENST00000591416 SVEP1Q4LDE5 3571 aa8.6□□□□□ -1.03
MBD1-224ENST00000591416 A8MUU9 505 aa8.59□□□□□ -1.03
MBD1-224ENST00000591416 A0A1B0GVY2 172 aa8.57□□□□□ -1.04
MBD1-224ENST00000591416 C20orf166-AS1Q96NR2 134 aa8.57□□□□□ -1.04
MBD1-224ENST00000591416 H1FX-AS1Q4G0G2 97 aa8.56□□□□□ -1.04
MBD1-224ENST00000591416 SRRM2Q9UQ35 2752 aaKnown RBP8.55□□□□□ -1.04
MBD1-224ENST00000591416 LCA10Q71F78 164 aa8.55□□□□□ -1.04
MBD1-224ENST00000591416 PRAC1Q96KF2 57 aa8.5□□□□□ -1.05
MBD1-224ENST00000591416 M0QZ58 72 aa8.47□□□□□ -1.05
MBD1-224ENST00000591416 ADM2Q7Z4H4 148 aa8.46□□□□□ -1.05
MBD1-224ENST00000591416 CUBNO60494 3623 aa8.46□□□□□ -1.06
MBD1-224ENST00000591416 TRRAPQ9Y4A5 3859 aa8.46□□□□□ -1.06
MBD1-224ENST00000591416 XP32Q5T750 250 aa8.43□□□□□ -1.06
MBD1-224ENST00000591416 SPATA8Q6RVD6 105 aa8.39□□□□□ -1.07
MBD1-224ENST00000591416 FBN3Q75N90 2809 aa8.38□□□□□ -1.07
MBD1-224ENST00000591416 TPRXLQ17RH7 258 aa8.37□□□□□ -1.07
MBD1-224ENST00000591416 KRTAP10-8P60410 259 aa8.34□□□□□ -1.07
MBD1-224ENST00000591416 KRTAP16-1A8MUX0 517 aa8.33□□□□□ -1.08
MBD1-224ENST00000591416 LUZP6Q538Z0 58 aa8.3□□□□□ -1.08
MBD1-224ENST00000591416 KRTAP13-3Q3SY46 172 aa8.28□□□□□ -1.08
MBD1-224ENST00000591416 PLAC4Q8WY50 150 aa8.23□□□□□ -1.09
MBD1-224ENST00000591416 MEGF8Q7Z7M0 2845 aa8.22□□□□□ -1.09
MBD1-224ENST00000591416 ROMO1P60602 79 aa8.2□□□□□ -1.1
MBD1-224ENST00000591416 A8MU10 97 aa8.17□□□□□ -1.1
MBD1-224ENST00000591416 COL7A1Q02388 2944 aa8.12□□□□□ -1.11
MBD1-224ENST00000591416 ZNF469Q96JG9 3925 aaPredicted RBP8.05□□□□□ -1.12
MBD1-224ENST00000591416 HUWE1Q7Z6Z7 4374 aaKnown RBP8.02□□□□□ -1.13
MBD1-224ENST00000591416 VPS13CQ709C8 3753 aa8.01□□□□□ -1.13
MBD1-224ENST00000591416 AKAP9Q99996 3911 aa7.95□□□□□ -1.14
MBD1-224ENST00000591416 A6NN06 94 aa7.91□□□□□ -1.14
MBD1-224ENST00000591416 MT1HL1P0DM35 61 aa7.83□□□□□ -1.16
MBD1-224ENST00000591416 KRTAP10-4P60372 401 aaPredicted RBP7.82□□□□□ -1.16
MBD1-224ENST00000591416 H3BS24 57 aa7.82□□□□□ -1.16
MBD1-224ENST00000591416 DNAH9Q9NYC9 4486 aa7.8□□□□□ -1.16
MBD1-224ENST00000591416 KRTAP10-10P60014 251 aa7.79□□□□□ -1.16
MBD1-224ENST00000591416 P0C880 135 aa7.78□□□□□ -1.16
MBD1-224ENST00000591416 TNP1P09430 55 aa7.78□□□□□ -1.16
MBD1-224ENST00000591416 H0YAA0 97 aa7.77□□□□□ -1.16
MBD1-224ENST00000591416 KRTAP25-1Q3LHN0 102 aa7.75□□□□□ -1.17
MBD1-224ENST00000591416 A0A0A0MQY5 61 aa7.72□□□□□ -1.17
MBD1-224ENST00000591416 DNHD1Q96M86 4753 aa7.7□□□□□ -1.18
MBD1-224ENST00000591416 KRTAP4-5Q9BYR2 181 aa7.67□□□□□ -1.18
MBD1-224ENST00000591416 KRTAP3-1Q9BYR8 98 aa7.66□□□□□ -1.18
MBD1-224ENST00000591416 ALMS1Q8TCU4 4167 aa7.63□□□□□ -1.19
MBD1-224ENST00000591416 C10orf95Q9H7T3 257 aa7.62□□□□□ -1.19
MBD1-224ENST00000591416 PLECQ15149 4684 aaKnown RBP7.54□□□□□ -1.2
MBD1-224ENST00000591416 NDUFAF8A1L188 74 aa7.53□□□□□ -1.2
MBD1-224ENST00000591416 PP632Q6XCG6 107 aa7.53□□□□□ -1.2
MBD1-224ENST00000591416 DNAH5Q8TE73 4624 aa7.51□□□□□ -1.21
MBD1-224ENST00000591416 PRO2289Q9P1D8 64 aa7.51□□□□□ -1.21
MBD1-224ENST00000591416 DNAH1Q9P2D7 4330 aa7.44□□□□□ -1.22
MBD1-224ENST00000591416 CSMD3Q7Z407 3707 aa7.44□□□□□ -1.22
MBD1-224ENST00000591416 VPS13DQ5THJ4 4388 aa7.41□□□□□ -1.22
MBD1-224ENST00000591416 DNAH11Q96DT5 4516 aa7.38□□□□□ -1.23
MBD1-224ENST00000591416 KRTAP12-2P59991 146 aa7.35□□□□□ -1.23
MBD1-224ENST00000591416 KRTAP10-6P60371 365 aaPredicted RBP7.33□□□□□ -1.24
MBD1-224ENST00000591416 STARD9Q9P2P6 4700 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms