RNA–Protein interactions for RNA: ENST00000591043.1

GCDH-214, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 1,764 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-214ENST00000591043 C8orf17Q9NRJ1 99 aa11.98□□□□□ -0.49
GCDH-214ENST00000591043 C4orf26Q17RF5 130 aa11.97□□□□□ -0.49
GCDH-214ENST00000591043 TP53AIP1Q9HCN2 124 aa11.97□□□□□ -0.49
GCDH-214ENST00000591043 FP248Q71RG6 208 aaPredicted RBP11.95□□□□□ -0.5
GCDH-214ENST00000591043 HERC2O95714 4834 aa11.94□□□□□ -0.5
GCDH-214ENST00000591043 PCLOQ9Y6V0 5065 aa11.93□□□□□ -0.5
GCDH-214ENST00000591043 IGHV6-1A0A0B4J1U7 121 aa11.91□□□□□ -0.5
GCDH-214ENST00000591043 A0A087X002 238 aa11.9□□□□□ -0.5
GCDH-214ENST00000591043 H0Y9P7 68 aa11.9□□□□□ -0.5
GCDH-214ENST00000591043 KRTAP13-2Q52LG2 175 aa11.9□□□□□ -0.51
GCDH-214ENST00000591043 SPINK6Q6UWN8 80 aa11.9□□□□□ -0.51
GCDH-214ENST00000591043 CYP4F30PQ9H0H9 118 aa11.9□□□□□ -0.51
GCDH-214ENST00000591043 KRTAP1-4P0C5Y4 121 aa11.89□□□□□ -0.51
GCDH-214ENST00000591043 LIMD2Q9BT23 127 aa11.88□□□□□ -0.51
GCDH-214ENST00000591043 C8orf87E5RJ46 101 aa11.87□□□□□ -0.51
GCDH-214ENST00000591043 TRAV22A0A0B4J277 110 aa11.87□□□□□ -0.51
GCDH-214ENST00000591043 A0A1B0GVY2 172 aa11.87□□□□□ -0.51
GCDH-214ENST00000591043 MRPL34Q9BQ48 92 aaKnown RBP11.87□□□□□ -0.51
GCDH-214ENST00000591043 LINC00208Q96KT6 92 aa11.85□□□□□ -0.51
GCDH-214ENST00000591043 PLA2G1BP04054 148 aaKnown RBP11.82□□□□□ -0.52
GCDH-214ENST00000591043 C4orf48Q5BLP8 95 aa11.8□□□□□ -0.52
GCDH-214ENST00000591043 SPANXA2-OT1Q8N9U9 137 aa11.8□□□□□ -0.52
GCDH-214ENST00000591043 KIAA1109Q2LD37 5005 aa11.8□□□□□ -0.52
GCDH-214ENST00000591043 C1orf64Q8NEQ6 169 aa11.79□□□□□ -0.52
GCDH-214ENST00000591043 TYMSOSQ8TAI1 123 aa11.78□□□□□ -0.52
GCDH-214ENST00000591043 NDUFS5O43920 106 aa11.77□□□□□ -0.53
GCDH-214ENST00000591043 SPINK1P00995 79 aa11.77□□□□□ -0.53
GCDH-214ENST00000591043 LRP1BQ9NZR2 4599 aa11.76□□□□□ -0.53
GCDH-214ENST00000591043 C1orf195Q5TG92 126 aa11.74□□□□□ -0.53
GCDH-214ENST00000591043 RPS29P62273 56 aaKnown RBP11.74□□□□□ -0.53
GCDH-214ENST00000591043 RYR1P21817 5038 aa11.74□□□□□ -0.53
GCDH-214ENST00000591043 SPAG11AQ6PDA7 123 aa11.72□□□□□ -0.53
GCDH-214ENST00000591043 LINC00313P59037 77 aa11.71□□□□□ -0.54
GCDH-214ENST00000591043 NOTCH2NLQ7Z3S9 236 aa11.71□□□□□ -0.54
GCDH-214ENST00000591043 Q1T7F1 81 aa11.68□□□□□ -0.54
GCDH-214ENST00000591043 VPS13BQ7Z7G8 4022 aa11.68□□□□□ -0.54
GCDH-214ENST00000591043 LINC00304Q8N9R0 145 aa11.64□□□□□ -0.55
GCDH-214ENST00000591043 SMR3BP02814 79 aaPredicted RBP11.63□□□□□ -0.55
GCDH-214ENST00000591043 LOC101927531A0A1B0GV80 90 aa11.62□□□□□ -0.55
GCDH-214ENST00000591043 PRO0628Q9UI54 55 aa11.62□□□□□ -0.55
GCDH-214ENST00000591043 Q8N9P0 234 aaPredicted RBP11.61□□□□□ -0.55
GCDH-214ENST00000591043 MPLKIPQ8TAP9 179 aa11.61□□□□□ -0.55
GCDH-214ENST00000591043 PKHD1P08F94 4074 aa11.59□□□□□ -0.55
GCDH-214ENST00000591043 PRR26Q8N8Z3 221 aa11.59□□□□□ -0.55
GCDH-214ENST00000591043 IGLV7-46A0A075B6I9 117 aa11.59□□□□□ -0.55
GCDH-214ENST00000591043 KRTAP10-4P60372 401 aaPredicted RBP11.59□□□□□ -0.55
GCDH-214ENST00000591043 FAM229AH3BQW9 127 aa11.58□□□□□ -0.56
GCDH-214ENST00000591043 ABCA13Q86UQ4 5058 aa11.57□□□□□ -0.56
GCDH-214ENST00000591043 DYNC1H1Q14204 4646 aaKnown RBP11.55□□□□□ -0.56
GCDH-214ENST00000591043 PRR4Q16378 134 aa11.55□□□□□ -0.56
GCDH-214ENST00000591043 KRTAP13-3Q3SY46 172 aa11.55□□□□□ -0.56
GCDH-214ENST00000591043 V9GYY9 64 aa11.55□□□□□ -0.56
GCDH-214ENST00000591043 KRTAP16-1A8MUX0 517 aa11.51□□□□□ -0.57
GCDH-214ENST00000591043 PCOTHQ58A44 107 aa11.49□□□□□ -0.57
GCDH-214ENST00000591043 Q5W150 140 aa11.49□□□□□ -0.57
GCDH-214ENST00000591043 KRTAP4-5Q9BYR2 181 aa11.46□□□□□ -0.58
GCDH-214ENST00000591043 APOBP04114 4563 aaKnown RBP11.44□□□□□ -0.58
GCDH-214ENST00000591043 BRK1Q8WUW1 75 aa11.39□□□□□ -0.59
GCDH-214ENST00000591043 COA5Q86WW8 74 aa11.39□□□□□ -0.59
GCDH-214ENST00000591043 IGKV2-30P06310 120 aa11.37□□□□□ -0.59
GCDH-214ENST00000591043 HSPG2P98160 4391 aa11.34□□□□□ -0.59
GCDH-214ENST00000591043 PKHD1L1Q86WI1 4243 aa11.31□□□□□ -0.6
GCDH-214ENST00000591043 PSPHP1O15172 72 aa11.3□□□□□ -0.6
GCDH-214ENST00000591043 Q5VV11 94 aa11.29□□□□□ -0.6
GCDH-214ENST00000591043 A8MUN3 132 aa11.28□□□□□ -0.6
GCDH-214ENST00000591043 Q5VSD8 79 aa11.28□□□□□ -0.6
GCDH-214ENST00000591043 HRES1P13985 223 aa11.26□□□□□ -0.61
GCDH-214ENST00000591043 ACYP2P14621 99 aa11.26□□□□□ -0.61
GCDH-214ENST00000591043 RETNLBQ9BQ08 111 aa11.26□□□□□ -0.61
GCDH-214ENST00000591043 FAT1Q14517 4588 aa11.23□□□□□ -0.61
GCDH-214ENST00000591043 DMAC1Q96GE9 116 aa11.23□□□□□ -0.61
GCDH-214ENST00000591043 C20orf166-AS1Q96NR2 134 aa11.22□□□□□ -0.61
GCDH-214ENST00000591043 LINC01558Q9Y6Z2 57 aa11.22□□□□□ -0.61
GCDH-214ENST00000591043 KRTAP10-8P60410 259 aa11.21□□□□□ -0.61
GCDH-214ENST00000591043 A8MUU9 505 aa11.21□□□□□ -0.62
GCDH-214ENST00000591043 Q75L30 129 aa11.21□□□□□ -0.62
GCDH-214ENST00000591043 IGKV2D-30A0A075B6S6 120 aa11.18□□□□□ -0.62
GCDH-214ENST00000591043 C7orf65Q6ZTY9 151 aa11.18□□□□□ -0.62
GCDH-214ENST00000591043 HERC1Q15751 4861 aa11.18□□□□□ -0.62
GCDH-214ENST00000591043 PRR15LQ9BU68 103 aa11.16□□□□□ -0.62
GCDH-214ENST00000591043 C9orf92A6NGG3 77 aa11.13□□□□□ -0.63
GCDH-214ENST00000591043 Q8N1X5 172 aa11.13□□□□□ -0.63
GCDH-214ENST00000591043 CHKB-CPT1BH3BT56 60 aa11.11□□□□□ -0.63
GCDH-214ENST00000591043 FLG2Q5D862 2391 aaPredicted RBP11.08□□□□□ -0.64
GCDH-214ENST00000591043 DMBT1Q9UGM3 2413 aaPredicted RBP10.99□□□□□ -0.65
GCDH-214ENST00000591043 LCA10Q71F78 164 aa10.97□□□□□ -0.65
GCDH-214ENST00000591043 CDC42SE1Q9NRR8 79 aa10.96□□□□□ -0.65
GCDH-214ENST00000591043 A6NED7 52 aa10.95□□□□□ -0.66
GCDH-214ENST00000591043 ATP11AUNQ6ZP68 121 aa10.94□□□□□ -0.66
GCDH-214ENST00000591043 TNXBP22105 4242 aa10.94□□□□□ -0.66
GCDH-214ENST00000591043 A8MU10 97 aa10.92□□□□□ -0.66
GCDH-214ENST00000591043 MYCBP2O75592 4640 aa10.9□□□□□ -0.66
GCDH-214ENST00000591043 MT1HL1P0DM35 61 aa10.88□□□□□ -0.67
GCDH-214ENST00000591043 SPINK7P58062 85 aa10.88□□□□□ -0.67
GCDH-214ENST00000591043 RPL37P61927 97 aaKnown RBP10.85□□□□□ -0.67
GCDH-214ENST00000591043 FAT3Q8TDW7 4589 aa10.84□□□□□ -0.67
GCDH-214ENST00000591043 SPTSSBQ8NFR3 76 aa10.84□□□□□ -0.67
GCDH-214ENST00000591043 PMAIP1Q13794 54 aa10.83□□□□□ -0.68
GCDH-214ENST00000591043 LRP1Q07954 4544 aaKnown RBP10.8□□□□□ -0.68
GCDH-214ENST00000591043 XP32Q5T750 250 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms