RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 A0A1B0GVX0 72 aa6.24□□□□□ -1.41
TPM4-212ENST00000590180 PDE6GP18545 87 aa6.24□□□□□ -1.41
TPM4-212ENST00000590180 LOC110117498A0A087WWA1 95 aa6.23□□□□□ -1.41
TPM4-212ENST00000590180 C9orf118A6NHY6 69 aa6.23□□□□□ -1.41
TPM4-212ENST00000590180 C8orf87E5RJ46 101 aa6.23□□□□□ -1.41
TPM4-212ENST00000590180 C14orf132Q9NPU4 83 aa6.23□□□□□ -1.41
TPM4-212ENST00000590180 NDUFB1O75438 58 aa6.22□□□□□ -1.41
TPM4-212ENST00000590180 A0A1B0GW54 56 aa6.21□□□□□ -1.42
TPM4-212ENST00000590180 TAX1BP3O14907 124 aa6.21□□□□□ -1.42
TPM4-212ENST00000590180 A0A1W2PPM0 123 aa6.19□□□□□ -1.42
TPM4-212ENST00000590180 KRTAP10-6P60371 365 aaPredicted RBP6.19□□□□□ -1.42
TPM4-212ENST00000590180 LCE2DQ5TA82 110 aaPredicted RBP6.19□□□□□ -1.42
TPM4-212ENST00000590180 NREPQ16612 68 aa6.18□□□□□ -1.42
TPM4-212ENST00000590180 FLGP20930 4061 aaPredicted RBP6.17□□□□□ -1.42
TPM4-212ENST00000590180 LORP23490 312 aaPredicted RBP6.17□□□□□ -1.42
TPM4-212ENST00000590180 MTURNQ8N3F0 131 aa6.17□□□□□ -1.42
TPM4-212ENST00000590180 A8MWP4 228 aa6.16□□□□□ -1.42
TPM4-212ENST00000590180 H3BT86 120 aa6.16□□□□□ -1.42
TPM4-212ENST00000590180 FAM236DA0A1B0GTK5 79 aa6.15□□□□□ -1.42
TPM4-212ENST00000590180 FAM236CP0DP71 79 aa6.15□□□□□ -1.42
TPM4-212ENST00000590180 IGKV3D-7A0A0C4DH55 119 aa6.14□□□□□ -1.43
TPM4-212ENST00000590180 C8orf17Q9NRJ1 99 aa6.14□□□□□ -1.43
TPM4-212ENST00000590180 KRTAP9-6A0A140TA67 174 aa6.13□□□□□ -1.43
TPM4-212ENST00000590180 ZCCHC13Q8WW36 166 aaKnown RBP6.13□□□□□ -1.43
TPM4-212ENST00000590180 RBM12B-AS1Q9P1G2 102 aa6.13□□□□□ -1.43
TPM4-212ENST00000590180 SPCS1Q9Y6A9 102 aa6.12□□□□□ -1.43
TPM4-212ENST00000590180 PRR15Q8IV56 129 aa6.11□□□□□ -1.43
TPM4-212ENST00000590180 Q8N9P0 234 aaPredicted RBP6.11□□□□□ -1.43
TPM4-212ENST00000590180 HRES1P13985 223 aa6.1□□□□□ -1.43
TPM4-212ENST00000590180 FSIP2Q5CZC0 6907 aa6.1□□□□□ -1.43
TPM4-212ENST00000590180 COL5A1-AS1Q5SY13 56 aa6.09□□□□□ -1.43
TPM4-212ENST00000590180 Q6ZVQ6 151 aa6.09□□□□□ -1.43
TPM4-212ENST00000590180 SPINK7P58062 85 aa6.08□□□□□ -1.44
TPM4-212ENST00000590180 BPY2O14599 106 aa6.06□□□□□ -1.44
TPM4-212ENST00000590180 MPLKIPQ8TAP9 179 aa6.05□□□□□ -1.44
TPM4-212ENST00000590180 MMP24-AS1A0A0U1RRL7 71 aa6.04□□□□□ -1.44
TPM4-212ENST00000590180 K7EQZ3 153 aa6.04□□□□□ -1.44
TPM4-212ENST00000590180 SMCPP49901 116 aaPredicted RBP6.04□□□□□ -1.44
TPM4-212ENST00000590180 TMEM254Q8TBM7 123 aa6.04□□□□□ -1.44
TPM4-212ENST00000590180 MRPL34Q9BQ48 92 aaKnown RBP6.04□□□□□ -1.44
TPM4-212ENST00000590180 hDV103S1A0JD37 113 aa6.03□□□□□ -1.44
TPM4-212ENST00000590180 NDUFS5O43920 106 aa6.03□□□□□ -1.44
TPM4-212ENST00000590180 CRCT1Q9UGL9 99 aa6.03□□□□□ -1.44
TPM4-212ENST00000590180 PCP4L1A6NKN8 68 aa6.01□□□□□ -1.45
TPM4-212ENST00000590180 K7EP34 96 aa6.01□□□□□ -1.45
TPM4-212ENST00000590180 PRO0461Q9UI25 63 aa5.99□□□□□ -1.45
TPM4-212ENST00000590180 WFDC13Q8IUB5 93 aa5.98□□□□□ -1.45
TPM4-212ENST00000590180 Q8N9L7 120 aa5.98□□□□□ -1.45
TPM4-212ENST00000590180 KRTAP9-8Q9BYQ0 159 aa5.98□□□□□ -1.45
TPM4-212ENST00000590180 GTF2H5Q6ZYL4 71 aa5.97□□□□□ -1.45
TPM4-212ENST00000590180 UBL5Q9BZL1 73 aa5.97□□□□□ -1.45
TPM4-212ENST00000590180 LINC00846Q9NV44 126 aa5.96□□□□□ -1.46
TPM4-212ENST00000590180 CASC2Q6XLA1 102 aa5.95□□□□□ -1.46
TPM4-212ENST00000590180 HCG22E2RYF7 251 aa5.93□□□□□ -1.46
TPM4-212ENST00000590180 IGKV2D-30A0A075B6S6 120 aa5.92□□□□□ -1.46
TPM4-212ENST00000590180 IGKV2-30P06310 120 aa5.92□□□□□ -1.46
TPM4-212ENST00000590180 F8W1H4 67 aa5.91□□□□□ -1.46
TPM4-212ENST00000590180 MT2AP02795 61 aa5.91□□□□□ -1.46
TPM4-212ENST00000590180 Q5W150 140 aa5.91□□□□□ -1.46
TPM4-212ENST00000590180 KRTAP10-10P60014 251 aa5.89□□□□□ -1.47
TPM4-212ENST00000590180 ETDBQ3ZM63 59 aa5.89□□□□□ -1.47
TPM4-212ENST00000590180 CXCL6P80162 114 aa5.87□□□□□ -1.47
TPM4-212ENST00000590180 C7orf65Q6ZTY9 151 aa5.87□□□□□ -1.47
TPM4-212ENST00000590180 MT1FP04733 61 aa5.86□□□□□ -1.47
TPM4-212ENST00000590180 H1FX-AS1Q4G0G2 97 aa5.86□□□□□ -1.47
TPM4-212ENST00000590180 C4orf26Q17RF5 130 aa5.8□□□□□ -1.48
TPM4-212ENST00000590180 KRTAP9-3Q9BYQ3 159 aa5.79□□□□□ -1.48
TPM4-212ENST00000590180 TP53AIP1Q9HCN2 124 aa5.77□□□□□ -1.49
TPM4-212ENST00000590180 LCE2BO14633 110 aa5.76□□□□□ -1.49
TPM4-212ENST00000590180 USH2AO75445 5202 aa5.76□□□□□ -1.49
TPM4-212ENST00000590180 ACYP1P07311 99 aa5.75□□□□□ -1.49
TPM4-212ENST00000590180 C1orf64Q8NEQ6 169 aa5.71□□□□□ -1.5
TPM4-212ENST00000590180 HIST1H4AP62805 103 aaKnown RBP5.69□□□□□ -1.5
TPM4-212ENST00000590180 KRTAP3-1Q9BYR8 98 aa5.69□□□□□ -1.5
TPM4-212ENST00000590180 SSPOA2VEC9 5147 aa5.69□□□□□ -1.5
TPM4-212ENST00000590180 FAM240AA0A1B0GVK7 77 aa5.68□□□□□ -1.5
TPM4-212ENST00000590180 C5orf47Q569G3 176 aa5.67□□□□□ -1.5
TPM4-212ENST00000590180 ATP5EP2Q5VTU8 51 aa5.67□□□□□ -1.5
TPM4-212ENST00000590180 KRTAP19-1Q8IUB9 90 aa5.66□□□□□ -1.5
TPM4-212ENST00000590180 CYP4F30PQ9H0H9 118 aa5.65□□□□□ -1.5
TPM4-212ENST00000590180 S4R3F8 94 aa5.65□□□□□ -1.5
TPM4-212ENST00000590180 A0A1B0GV90 55 aa5.64□□□□□ -1.51
TPM4-212ENST00000590180 TRAV22A0A0B4J277 110 aa5.63□□□□□ -1.51
TPM4-212ENST00000590180 CSAG1Q6PB30 78 aa5.63□□□□□ -1.51
TPM4-212ENST00000590180 LINC00643Q86TS7 51 aa5.62□□□□□ -1.51
TPM4-212ENST00000590180 LOC101927531A0A1B0GV80 90 aa5.61□□□□□ -1.51
TPM4-212ENST00000590180 UQCRQO14949 82 aa5.61□□□□□ -1.51
TPM4-212ENST00000590180 FAM236AA0A1B0GUQ0 79 aa5.6□□□□□ -1.51
TPM4-212ENST00000590180 FAM236BA0A1B0GV22 79 aa5.6□□□□□ -1.51
TPM4-212ENST00000590180 LCA10Q71F78 164 aa5.6□□□□□ -1.51
TPM4-212ENST00000590180 A0A087WVE0 104 aa5.59□□□□□ -1.51
TPM4-212ENST00000590180 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.59□□□□□ -1.51
TPM4-212ENST00000590180 H0Y9P7 68 aa5.58□□□□□ -1.52
TPM4-212ENST00000590180 FCGBPQ9Y6R7 5405 aaPredicted RBP5.57□□□□□ -1.52
TPM4-212ENST00000590180 ATOX1O00244 68 aa5.56□□□□□ -1.52
TPM4-212ENST00000590180 KRTAP19-6Q3LI70 58 aa5.53□□□□□ -1.52
TPM4-212ENST00000590180 KRTAP9-7A8MTY7 169 aa5.52□□□□□ -1.53
TPM4-212ENST00000590180 J3QR89 54 aa5.52□□□□□ -1.53
TPM4-212ENST00000590180 LINC00208Q96KT6 92 aa5.51□□□□□ -1.53
TPM4-212ENST00000590180 KRTAP3-3Q9BYR6 98 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 174.4 ms