RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 TP53AIP1Q9HCN2 124 aa6.1□□□□□ -1.43
VPS25-203ENST00000589520 MMP24-AS1A0A0U1RRL7 71 aa6.09□□□□□ -1.43
VPS25-203ENST00000589520 H7BZZ5 65 aa6.09□□□□□ -1.43
VPS25-203ENST00000589520 KRTAP1-4P0C5Y4 121 aa6.09□□□□□ -1.43
VPS25-203ENST00000589520 C8orf17Q9NRJ1 99 aa6.09□□□□□ -1.43
VPS25-203ENST00000589520 PLA2G1BP04054 148 aaKnown RBP6.08□□□□□ -1.44
VPS25-203ENST00000589520 C4orf48Q5BLP8 95 aa6.08□□□□□ -1.44
VPS25-203ENST00000589520 CYSTM1Q9H1C7 97 aa6.08□□□□□ -1.44
VPS25-203ENST00000589520 SNURFQ9Y675 71 aa6.08□□□□□ -1.44
VPS25-203ENST00000589520 C8orf87E5RJ46 101 aa6.07□□□□□ -1.44
VPS25-203ENST00000589520 KRTAP13-2Q52LG2 175 aa6.07□□□□□ -1.44
VPS25-203ENST00000589520 SPAG11AQ6PDA7 123 aa6.07□□□□□ -1.44
VPS25-203ENST00000589520 A0A087X002 238 aa6.06□□□□□ -1.44
VPS25-203ENST00000589520 FAM236DA0A1B0GTK5 79 aa6.06□□□□□ -1.44
VPS25-203ENST00000589520 FAM236CP0DP71 79 aa6.06□□□□□ -1.44
VPS25-203ENST00000589520 RPS29P62273 56 aaKnown RBP6.06□□□□□ -1.44
VPS25-203ENST00000589520 DYNC1H1Q14204 4646 aaKnown RBP6.05□□□□□ -1.44
VPS25-203ENST00000589520 SPINK1P00995 79 aa6.05□□□□□ -1.44
VPS25-203ENST00000589520 TYMSOSQ8TAI1 123 aa6.05□□□□□ -1.44
VPS25-203ENST00000589520 IGHV6-1A0A0B4J1U7 121 aa6.04□□□□□ -1.44
VPS25-203ENST00000589520 ZCCHC13Q8WW36 166 aaKnown RBP6.04□□□□□ -1.44
VPS25-203ENST00000589520 MRPL34Q9BQ48 92 aaKnown RBP6.04□□□□□ -1.44
VPS25-203ENST00000589520 PKHD1P08F94 4074 aa6.03□□□□□ -1.44
VPS25-203ENST00000589520 DMBT1Q9UGM3 2413 aaPredicted RBP6.03□□□□□ -1.44
VPS25-203ENST00000589520 H0Y9P7 68 aa6□□□□□ -1.45
VPS25-203ENST00000589520 C1orf195Q5TG92 126 aa6□□□□□ -1.45
VPS25-203ENST00000589520 SERP1Q9Y6X1 66 aa6□□□□□ -1.45
VPS25-203ENST00000589520 TRAV22A0A0B4J277 110 aa5.99□□□□□ -1.45
VPS25-203ENST00000589520 SRRM2Q9UQ35 2752 aaKnown RBP5.99□□□□□ -1.45
VPS25-203ENST00000589520 SMR3BP02814 79 aaPredicted RBP5.98□□□□□ -1.45
VPS25-203ENST00000589520 LINC00313P59037 77 aa5.98□□□□□ -1.45
VPS25-203ENST00000589520 LINC00208Q96KT6 92 aa5.98□□□□□ -1.45
VPS25-203ENST00000589520 FAM229AH3BQW9 127 aa5.97□□□□□ -1.45
VPS25-203ENST00000589520 LINC00304Q8N9R0 145 aa5.97□□□□□ -1.45
VPS25-203ENST00000589520 NDUFS5O43920 106 aa5.96□□□□□ -1.46
VPS25-203ENST00000589520 KRTAP10-4P60372 401 aaPredicted RBP5.96□□□□□ -1.46
VPS25-203ENST00000589520 C1orf64Q8NEQ6 169 aa5.96□□□□□ -1.46
VPS25-203ENST00000589520 APOBP04114 4563 aaKnown RBP5.95□□□□□ -1.46
VPS25-203ENST00000589520 VPS13BQ7Z7G8 4022 aa5.95□□□□□ -1.46
VPS25-203ENST00000589520 SPANXA2-OT1Q8N9U9 137 aa5.95□□□□□ -1.46
VPS25-203ENST00000589520 PRR26Q8N8Z3 221 aa5.94□□□□□ -1.46
VPS25-203ENST00000589520 CYP4F30PQ9H0H9 118 aa5.93□□□□□ -1.46
VPS25-203ENST00000589520 HSPG2P98160 4391 aa5.92□□□□□ -1.46
VPS25-203ENST00000589520 NOTCH2NLQ7Z3S9 236 aa5.92□□□□□ -1.46
VPS25-203ENST00000589520 Q8N9P0 234 aaPredicted RBP5.92□□□□□ -1.46
VPS25-203ENST00000589520 LOC101927531A0A1B0GV80 90 aa5.91□□□□□ -1.46
VPS25-203ENST00000589520 SMIM26A0A096LP01 95 aa5.88□□□□□ -1.47
VPS25-203ENST00000589520 IGLV7-46A0A075B6I9 117 aa5.87□□□□□ -1.47
VPS25-203ENST00000589520 FAT1Q14517 4588 aa5.87□□□□□ -1.47
VPS25-203ENST00000589520 KRTAP16-1A8MUX0 517 aa5.85□□□□□ -1.47
VPS25-203ENST00000589520 KRTAP13-3Q3SY46 172 aa5.84□□□□□ -1.47
VPS25-203ENST00000589520 OXTP01178 125 aa5.83□□□□□ -1.48
VPS25-203ENST00000589520 Q5VSD8 79 aa5.83□□□□□ -1.48
VPS25-203ENST00000589520 Q5W150 140 aa5.82□□□□□ -1.48
VPS25-203ENST00000589520 PKHD1L1Q86WI1 4243 aa5.81□□□□□ -1.48
VPS25-203ENST00000589520 KRTAP10-8P60410 259 aa5.8□□□□□ -1.48
VPS25-203ENST00000589520 IGKV2-30P06310 120 aa5.78□□□□□ -1.48
VPS25-203ENST00000589520 PCOTHQ58A44 107 aa5.78□□□□□ -1.48
VPS25-203ENST00000589520 MYCBP2O75592 4640 aa5.77□□□□□ -1.49
VPS25-203ENST00000589520 KRTAP9-6A0A140TA67 174 aa5.76□□□□□ -1.49
VPS25-203ENST00000589520 PRR4Q16378 134 aa5.76□□□□□ -1.49
VPS25-203ENST00000589520 FP248Q71RG6 208 aaPredicted RBP5.76□□□□□ -1.49
VPS25-203ENST00000589520 Q8N1X5 172 aa5.76□□□□□ -1.49
VPS25-203ENST00000589520 V9GYY9 64 aa5.76□□□□□ -1.49
VPS25-203ENST00000589520 C20orf166-AS1Q96NR2 134 aa5.75□□□□□ -1.49
VPS25-203ENST00000589520 A8MUU9 505 aa5.74□□□□□ -1.49
VPS25-203ENST00000589520 HMCN2Q8NDA2 5059 aa5.74□□□□□ -1.49
VPS25-203ENST00000589520 ACYP2P14621 99 aa5.72□□□□□ -1.49
VPS25-203ENST00000589520 Q1T7F1 81 aa5.72□□□□□ -1.49
VPS25-203ENST00000589520 KRTAP9-2Q9BYQ4 174 aa5.72□□□□□ -1.49
VPS25-203ENST00000589520 FLG2Q5D862 2391 aaPredicted RBP5.72□□□□□ -1.49
VPS25-203ENST00000589520 RNF213Q63HN8 5207 aa5.72□□□□□ -1.49
VPS25-203ENST00000589520 HRES1P13985 223 aa5.7□□□□□ -1.5
VPS25-203ENST00000589520 COA5Q86WW8 74 aa5.7□□□□□ -1.5
VPS25-203ENST00000589520 C7orf65Q6ZTY9 151 aa5.69□□□□□ -1.5
VPS25-203ENST00000589520 Q75L30 129 aa5.69□□□□□ -1.5
VPS25-203ENST00000589520 RETNLBQ9BQ08 111 aa5.69□□□□□ -1.5
VPS25-203ENST00000589520 DMAC1Q96GE9 116 aa5.68□□□□□ -1.5
VPS25-203ENST00000589520 IGKV2D-30A0A075B6S6 120 aa5.67□□□□□ -1.5
VPS25-203ENST00000589520 C9orf92A6NGG3 77 aa5.67□□□□□ -1.5
VPS25-203ENST00000589520 C4orf26Q17RF5 130 aa5.67□□□□□ -1.5
VPS25-203ENST00000589520 FAT3Q8TDW7 4589 aa5.66□□□□□ -1.5
VPS25-203ENST00000589520 MPLKIPQ8TAP9 179 aa5.65□□□□□ -1.5
VPS25-203ENST00000589520 A8MUN3 132 aa5.64□□□□□ -1.51
VPS25-203ENST00000589520 TNXBP22105 4242 aa5.64□□□□□ -1.51
VPS25-203ENST00000589520 CHKB-CPT1BH3BT56 60 aa5.61□□□□□ -1.51
VPS25-203ENST00000589520 MT1HL1P0DM35 61 aa5.6□□□□□ -1.51
VPS25-203ENST00000589520 ATP11AUNQ6ZP68 121 aa5.6□□□□□ -1.51
VPS25-203ENST00000589520 J3QL48 77 aa5.58□□□□□ -1.52
VPS25-203ENST00000589520 LINC01558Q9Y6Z2 57 aa5.58□□□□□ -1.52
VPS25-203ENST00000589520 RPL37P61927 97 aaKnown RBP5.57□□□□□ -1.52
VPS25-203ENST00000589520 LRP1Q07954 4544 aaKnown RBP5.56□□□□□ -1.52
VPS25-203ENST00000589520 SPINK7P58062 85 aa5.56□□□□□ -1.52
VPS25-203ENST00000589520 SPTSSBQ8NFR3 76 aa5.53□□□□□ -1.52
VPS25-203ENST00000589520 XP32Q5T750 250 aa5.52□□□□□ -1.53
VPS25-203ENST00000589520 PSPHP1O15172 72 aa5.51□□□□□ -1.53
VPS25-203ENST00000589520 TPRXLQ17RH7 258 aa5.51□□□□□ -1.53
VPS25-203ENST00000589520 PRR15LQ9BU68 103 aa5.51□□□□□ -1.53
VPS25-203ENST00000589520 Q5VV11 94 aa5.5□□□□□ -1.53
VPS25-203ENST00000589520 MUC2Q02817 5179 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms