RNA–Protein interactions for RNA: ENST00000589146.5

CAPNS1-207, Transcript of calpain small subunit 1, humanhuman

TSL 3 BASIC

Gene CAPNS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-207ENST00000589146 KRTAP29-1A8MX34 341 aaPredicted RBP12.99□□□□□ -0.33
CAPNS1-207ENST00000589146 MMP24-AS1A0A0U1RRL7 71 aa12.96□□□□□ -0.33
CAPNS1-207ENST00000589146 SERP2Q8N6R1 65 aa12.96□□□□□ -0.33
CAPNS1-207ENST00000589146 TRAV7A0A075B6U4 112 aa12.94□□□□□ -0.34
CAPNS1-207ENST00000589146 C8orf17Q9NRJ1 99 aa12.94□□□□□ -0.34
CAPNS1-207ENST00000589146 COX7CP15954 63 aa12.92□□□□□ -0.34
CAPNS1-207ENST00000589146 CASC2Q6XLA1 102 aa12.92□□□□□ -0.34
CAPNS1-207ENST00000589146 FAT3Q8TDW7 4589 aa12.91□□□□□ -0.34
CAPNS1-207ENST00000589146 IGHV6-1A0A0B4J1U7 121 aa12.91□□□□□ -0.34
CAPNS1-207ENST00000589146 WFDC13Q8IUB5 93 aa12.91□□□□□ -0.34
CAPNS1-207ENST00000589146 OCR1Q9BZK8 76 aa12.9□□□□□ -0.34
CAPNS1-207ENST00000589146 C8orf87E5RJ46 101 aa12.89□□□□□ -0.35
CAPNS1-207ENST00000589146 TNXBP22105 4242 aa12.89□□□□□ -0.35
CAPNS1-207ENST00000589146 hDV103S1A0JD37 113 aa12.87□□□□□ -0.35
CAPNS1-207ENST00000589146 UQCRQO14949 82 aa12.87□□□□□ -0.35
CAPNS1-207ENST00000589146 LRP1Q07954 4544 aaKnown RBP12.84□□□□□ -0.35
CAPNS1-207ENST00000589146 NOTCH2NLQ7Z3S9 236 aa12.84□□□□□ -0.35
CAPNS1-207ENST00000589146 CCDC179H3BU77 68 aa12.83□□□□□ -0.36
CAPNS1-207ENST00000589146 TMEM254Q8TBM7 123 aa12.83□□□□□ -0.36
CAPNS1-207ENST00000589146 ABCA13Q86UQ4 5058 aa12.81□□□□□ -0.36
CAPNS1-207ENST00000589146 OXTP01178 125 aa12.79□□□□□ -0.36
CAPNS1-207ENST00000589146 MT1HL1P0DM35 61 aa12.79□□□□□ -0.36
CAPNS1-207ENST00000589146 LINC00313P59037 77 aa12.78□□□□□ -0.36
CAPNS1-207ENST00000589146 MRPL34Q9BQ48 92 aaKnown RBP12.78□□□□□ -0.36
CAPNS1-207ENST00000589146 KRTAP4-5Q9BYR2 181 aa12.76□□□□□ -0.37
CAPNS1-207ENST00000589146 FLG2Q5D862 2391 aaPredicted RBP12.76□□□□□ -0.37
CAPNS1-207ENST00000589146 TP53AIP1Q9HCN2 124 aa12.71□□□□□ -0.37
CAPNS1-207ENST00000589146 KRTAP16-1A8MUX0 517 aa12.69□□□□□ -0.38
CAPNS1-207ENST00000589146 C5orf47Q569G3 176 aa12.69□□□□□ -0.38
CAPNS1-207ENST00000589146 C20orf197Q8N268 126 aa12.65□□□□□ -0.38
CAPNS1-207ENST00000589146 Q8N9P0 234 aaPredicted RBP12.65□□□□□ -0.38
CAPNS1-207ENST00000589146 KLKP1Q107X0 134 aa12.64□□□□□ -0.39
CAPNS1-207ENST00000589146 A0A0U1RQV1 116 aa12.62□□□□□ -0.39
CAPNS1-207ENST00000589146 FP248Q71RG6 208 aaPredicted RBP12.62□□□□□ -0.39
CAPNS1-207ENST00000589146 RETNLBQ9BQ08 111 aa12.62□□□□□ -0.39
CAPNS1-207ENST00000589146 MYCBP2O75592 4640 aa12.61□□□□□ -0.39
CAPNS1-207ENST00000589146 NDUFS5O43920 106 aa12.6□□□□□ -0.39
CAPNS1-207ENST00000589146 H3BPC8 53 aa12.57□□□□□ -0.4
CAPNS1-207ENST00000589146 MP68P56378 58 aa12.56□□□□□ -0.4
CAPNS1-207ENST00000589146 TRAV22A0A0B4J277 110 aa12.55□□□□□ -0.4
CAPNS1-207ENST00000589146 H0Y9P7 68 aa12.55□□□□□ -0.4
CAPNS1-207ENST00000589146 ZCCHC13Q8WW36 166 aaKnown RBP12.55□□□□□ -0.4
CAPNS1-207ENST00000589146 CYSTM1Q9H1C7 97 aa12.55□□□□□ -0.4
CAPNS1-207ENST00000589146 SNURFQ9Y675 71 aa12.54□□□□□ -0.4
CAPNS1-207ENST00000589146 DMBT1Q9UGM3 2413 aaPredicted RBP12.52□□□□□ -0.4
CAPNS1-207ENST00000589146 NDUFC1O43677 76 aa12.5□□□□□ -0.41
CAPNS1-207ENST00000589146 KRTAP13-3Q3SY46 172 aa12.5□□□□□ -0.41
CAPNS1-207ENST00000589146 C9orf92A6NGG3 77 aa12.46□□□□□ -0.41
CAPNS1-207ENST00000589146 Q5W150 140 aa12.46□□□□□ -0.41
CAPNS1-207ENST00000589146 C20orf166-AS1Q96NR2 134 aa12.46□□□□□ -0.41
CAPNS1-207ENST00000589146 A8MUU9 505 aa12.45□□□□□ -0.42
CAPNS1-207ENST00000589146 H7BZZ5 65 aa12.45□□□□□ -0.42
CAPNS1-207ENST00000589146 LINC00208Q96KT6 92 aa12.45□□□□□ -0.42
CAPNS1-207ENST00000589146 IGLV7-46A0A075B6I9 117 aa12.44□□□□□ -0.42
CAPNS1-207ENST00000589146 C1orf64Q8NEQ6 169 aa12.43□□□□□ -0.42
CAPNS1-207ENST00000589146 TMEM258P61165 79 aa12.39□□□□□ -0.43
CAPNS1-207ENST00000589146 HERC1Q15751 4861 aa12.37□□□□□ -0.43
CAPNS1-207ENST00000589146 LOC101927531A0A1B0GV80 90 aa12.35□□□□□ -0.43
CAPNS1-207ENST00000589146 Q75L30 129 aa12.35□□□□□ -0.43
CAPNS1-207ENST00000589146 J3QL48 77 aa12.34□□□□□ -0.43
CAPNS1-207ENST00000589146 PRR4Q16378 134 aa12.3□□□□□ -0.44
CAPNS1-207ENST00000589146 IGKV2-30P06310 120 aa12.27□□□□□ -0.45
CAPNS1-207ENST00000589146 CYP4F30PQ9H0H9 118 aa12.26□□□□□ -0.45
CAPNS1-207ENST00000589146 TPRXLQ17RH7 258 aa12.25□□□□□ -0.45
CAPNS1-207ENST00000589146 XP32Q5T750 250 aa12.24□□□□□ -0.45
CAPNS1-207ENST00000589146 FAM236DA0A1B0GTK5 79 aa12.23□□□□□ -0.45
CAPNS1-207ENST00000589146 FAM236CP0DP71 79 aa12.23□□□□□ -0.45
CAPNS1-207ENST00000589146 ATP5EP56381 51 aaPredicted RBP12.23□□□□□ -0.45
CAPNS1-207ENST00000589146 RPL37P61927 97 aaKnown RBP12.2□□□□□ -0.46
CAPNS1-207ENST00000589146 SPANXA2-OT1Q8N9U9 137 aa12.2□□□□□ -0.46
CAPNS1-207ENST00000589146 PCOTHQ58A44 107 aa12.16□□□□□ -0.46
CAPNS1-207ENST00000589146 ATP11AUNQ6ZP68 121 aa12.11□□□□□ -0.47
CAPNS1-207ENST00000589146 C7orf65Q6ZTY9 151 aa12.11□□□□□ -0.47
CAPNS1-207ENST00000589146 IGKV2D-30A0A075B6S6 120 aa12.1□□□□□ -0.47
CAPNS1-207ENST00000589146 HRES1P13985 223 aa12.04□□□□□ -0.48
CAPNS1-207ENST00000589146 RPS28P62857 69 aaKnown RBP12.04□□□□□ -0.48
CAPNS1-207ENST00000589146 SERP1Q9Y6X1 66 aa12.01□□□□□ -0.49
CAPNS1-207ENST00000589146 SPINK7P58062 85 aa11.99□□□□□ -0.49
CAPNS1-207ENST00000589146 DMAC1Q96GE9 116 aa11.9□□□□□ -0.5
CAPNS1-207ENST00000589146 LPAP08519 4548 aa11.89□□□□□ -0.51
CAPNS1-207ENST00000589146 LRP2P98164 4655 aa11.87□□□□□ -0.51
CAPNS1-207ENST00000589146 ACYP2P14621 99 aa11.81□□□□□ -0.52
CAPNS1-207ENST00000589146 SEC61BP60468 96 aaKnown RBP11.81□□□□□ -0.52
CAPNS1-207ENST00000589146 C4orf26Q17RF5 130 aa11.8□□□□□ -0.52
CAPNS1-207ENST00000589146 A8MUN3 132 aa11.79□□□□□ -0.52
CAPNS1-207ENST00000589146 COA5Q86WW8 74 aa11.78□□□□□ -0.52
CAPNS1-207ENST00000589146 HMCN2Q8NDA2 5059 aa11.76□□□□□ -0.53
CAPNS1-207ENST00000589146 MUC17Q685J3 4493 aa11.75□□□□□ -0.53
CAPNS1-207ENST00000589146 COX6B2Q6YFQ2 88 aa11.73□□□□□ -0.53
CAPNS1-207ENST00000589146 KRTAP3-1Q9BYR8 98 aa11.71□□□□□ -0.53
CAPNS1-207ENST00000589146 UBR4Q5T4S7 5183 aa11.7□□□□□ -0.54
CAPNS1-207ENST00000589146 SMIM26A0A096LP01 95 aa11.69□□□□□ -0.54
CAPNS1-207ENST00000589146 MPLKIPQ8TAP9 179 aa11.64□□□□□ -0.55
CAPNS1-207ENST00000589146 CHKB-CPT1BH3BT56 60 aa11.57□□□□□ -0.56
CAPNS1-207ENST00000589146 KRTAP4-1Q9BYQ7 146 aa11.55□□□□□ -0.56
CAPNS1-207ENST00000589146 RBM12B-AS1Q9P1G2 102 aa11.51□□□□□ -0.57
CAPNS1-207ENST00000589146 Q1T7F1 81 aa11.48□□□□□ -0.57
CAPNS1-207ENST00000589146 V9GYY9 64 aa11.44□□□□□ -0.58
CAPNS1-207ENST00000589146 H1FX-AS1Q4G0G2 97 aa11.43□□□□□ -0.58
CAPNS1-207ENST00000589146 SPTSSBQ8NFR3 76 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms