RNA–Protein interactions for RNA: ENST00000589091.1

DNMT1-217, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-217ENST00000589091 DEFB116Q30KQ4 102 aa7.4□□□□□ -1.22
DNMT1-217ENST00000589091 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.39□□□□□ -1.23
DNMT1-217ENST00000589091 C8orf87E5RJ46 101 aa7.39□□□□□ -1.23
DNMT1-217ENST00000589091 SCGB1C2P0DMR2 95 aa7.39□□□□□ -1.23
DNMT1-217ENST00000589091 NOTCH2NLQ7Z3S9 236 aa7.39□□□□□ -1.23
DNMT1-217ENST00000589091 DSCR8Q96T75 97 aa7.39□□□□□ -1.23
DNMT1-217ENST00000589091 VPS25Q9BRG1 176 aa7.39□□□□□ -1.23
DNMT1-217ENST00000589091 RBM12B-AS1Q9P1G2 102 aa7.39□□□□□ -1.23
DNMT1-217ENST00000589091 KRTAP9-8Q9BYQ0 159 aa7.37□□□□□ -1.23
DNMT1-217ENST00000589091 A0A1B0GVX0 72 aa7.36□□□□□ -1.23
DNMT1-217ENST00000589091 J3KT08 172 aa7.35□□□□□ -1.23
DNMT1-217ENST00000589091 HRES1P13985 223 aa7.35□□□□□ -1.23
DNMT1-217ENST00000589091 MPLKIPQ8TAP9 179 aa7.35□□□□□ -1.23
DNMT1-217ENST00000589091 KRTAP4-12Q9BQ66 201 aa7.35□□□□□ -1.23
DNMT1-217ENST00000589091 C9JAW5 83 aa7.33□□□□□ -1.24
DNMT1-217ENST00000589091 BAALC-AS2P0C853 105 aa7.32□□□□□ -1.24
DNMT1-217ENST00000589091 MTURNQ8N3F0 131 aa7.3□□□□□ -1.24
DNMT1-217ENST00000589091 NDUFB1O75438 58 aa7.29□□□□□ -1.24
DNMT1-217ENST00000589091 KRTAP19-1Q8IUB9 90 aa7.29□□□□□ -1.24
DNMT1-217ENST00000589091 A0A1B0GW54 56 aa7.28□□□□□ -1.24
DNMT1-217ENST00000589091 JMJD7-PLA2G4BH0Y9G9 81 aa7.28□□□□□ -1.24
DNMT1-217ENST00000589091 Q6ZQT0 140 aa7.28□□□□□ -1.24
DNMT1-217ENST00000589091 ZCCHC13Q8WW36 166 aaKnown RBP7.28□□□□□ -1.24
DNMT1-217ENST00000589091 M0R143 59 aa7.26□□□□□ -1.25
DNMT1-217ENST00000589091 ATXN8Q156A1 80 aa7.26□□□□□ -1.25
DNMT1-217ENST00000589091 MT2AP02795 61 aa7.25□□□□□ -1.25
DNMT1-217ENST00000589091 LCE3BQ5TA77 95 aa7.25□□□□□ -1.25
DNMT1-217ENST00000589091 PDE6GP18545 87 aa7.24□□□□□ -1.25
DNMT1-217ENST00000589091 Q8N9P0 234 aaPredicted RBP7.24□□□□□ -1.25
DNMT1-217ENST00000589091 LOC110117498A0A087WWA1 95 aa7.23□□□□□ -1.25
DNMT1-217ENST00000589091 A8MWP4 228 aa7.22□□□□□ -1.25
DNMT1-217ENST00000589091 SPINK7P58062 85 aa7.22□□□□□ -1.25
DNMT1-217ENST00000589091 C8orf17Q9NRJ1 99 aa7.21□□□□□ -1.26
DNMT1-217ENST00000589091 MT1FP04733 61 aa7.19□□□□□ -1.26
DNMT1-217ENST00000589091 LYRM7Q5U5X0 104 aa7.19□□□□□ -1.26
DNMT1-217ENST00000589091 KRTAP10-10P60014 251 aa7.18□□□□□ -1.26
DNMT1-217ENST00000589091 NAA38Q9BRA0 125 aaKnown RBP7.17□□□□□ -1.26
DNMT1-217ENST00000589091 C14orf132Q9NPU4 83 aa7.16□□□□□ -1.26
DNMT1-217ENST00000589091 IGKV3D-7A0A0C4DH55 119 aa7.15□□□□□ -1.26
DNMT1-217ENST00000589091 Q6ZVQ6 151 aa7.15□□□□□ -1.26
DNMT1-217ENST00000589091 KRTAP9-3Q9BYQ3 159 aa7.14□□□□□ -1.27
DNMT1-217ENST00000589091 PCP4P48539 62 aa7.13□□□□□ -1.27
DNMT1-217ENST00000589091 NREPQ16612 68 aa7.13□□□□□ -1.27
DNMT1-217ENST00000589091 WFDC13Q8IUB5 93 aa7.13□□□□□ -1.27
DNMT1-217ENST00000589091 PRR15Q8IV56 129 aa7.13□□□□□ -1.27
DNMT1-217ENST00000589091 SMIM6P0DI80 62 aa7.11□□□□□ -1.27
DNMT1-217ENST00000589091 TMEM254Q8TBM7 123 aa7.11□□□□□ -1.27
DNMT1-217ENST00000589091 USH2AO75445 5202 aa7.1□□□□□ -1.27
DNMT1-217ENST00000589091 KRTAP9-7A8MTY7 169 aa7.1□□□□□ -1.27
DNMT1-217ENST00000589091 MRPL34Q9BQ48 92 aaKnown RBP7.09□□□□□ -1.27
DNMT1-217ENST00000589091 MMP24-AS1A0A0U1RRL7 71 aa7.08□□□□□ -1.28
DNMT1-217ENST00000589091 TSTD3H0UI37 97 aa7.07□□□□□ -1.28
DNMT1-217ENST00000589091 H3BT86 120 aa7.06□□□□□ -1.28
DNMT1-217ENST00000589091 KRTAP19-4Q3LI73 84 aa7.06□□□□□ -1.28
DNMT1-217ENST00000589091 SSPOA2VEC9 5147 aa7.05□□□□□ -1.28
DNMT1-217ENST00000589091 hDV103S1A0JD37 113 aa7.05□□□□□ -1.28
DNMT1-217ENST00000589091 KRTAP9-9Q9BYP9 154 aa7.05□□□□□ -1.28
DNMT1-217ENST00000589091 KRTAP9-4Q9BYQ2 154 aa7.05□□□□□ -1.28
DNMT1-217ENST00000589091 BATFQ16520 125 aa7.04□□□□□ -1.28
DNMT1-217ENST00000589091 K7EQZ3 153 aa7.03□□□□□ -1.28
DNMT1-217ENST00000589091 NDUFS5O43920 106 aa7.03□□□□□ -1.28
DNMT1-217ENST00000589091 LINC00846Q9NV44 126 aa7.03□□□□□ -1.28
DNMT1-217ENST00000589091 C9orf118A6NHY6 69 aa7□□□□□ -1.29
DNMT1-217ENST00000589091 BPY2O14599 106 aa6.99□□□□□ -1.29
DNMT1-217ENST00000589091 H1FX-AS1Q4G0G2 97 aa6.99□□□□□ -1.29
DNMT1-217ENST00000589091 A0A1W2PPM0 123 aa6.97□□□□□ -1.29
DNMT1-217ENST00000589091 C7orf65Q6ZTY9 151 aa6.97□□□□□ -1.29
DNMT1-217ENST00000589091 FCGBPQ9Y6R7 5405 aaPredicted RBP6.95□□□□□ -1.3
DNMT1-217ENST00000589091 IGKV2D-30A0A075B6S6 120 aa6.95□□□□□ -1.3
DNMT1-217ENST00000589091 IGKV2-30P06310 120 aa6.95□□□□□ -1.3
DNMT1-217ENST00000589091 TAX1BP3O14907 124 aa6.94□□□□□ -1.3
DNMT1-217ENST00000589091 KRTAP19-6Q3LI70 58 aa6.93□□□□□ -1.3
DNMT1-217ENST00000589091 CASC2Q6XLA1 102 aa6.92□□□□□ -1.3
DNMT1-217ENST00000589091 KRTAP4-8A0A0G2JLE6 195 aa6.9□□□□□ -1.3
DNMT1-217ENST00000589091 Q5W150 140 aa6.9□□□□□ -1.3
DNMT1-217ENST00000589091 HCG22E2RYF7 251 aa6.89□□□□□ -1.31
DNMT1-217ENST00000589091 CXCL6P80162 114 aa6.87□□□□□ -1.31
DNMT1-217ENST00000589091 Q8N9L7 120 aa6.87□□□□□ -1.31
DNMT1-217ENST00000589091 SPCS1Q9Y6A9 102 aa6.87□□□□□ -1.31
DNMT1-217ENST00000589091 UBL5Q9BZL1 73 aa6.84□□□□□ -1.31
DNMT1-217ENST00000589091 C4orf26Q17RF5 130 aa6.82□□□□□ -1.32
DNMT1-217ENST00000589091 LOC105371267A0A1B0GV96 52 aa6.81□□□□□ -1.32
DNMT1-217ENST00000589091 LCE1DQ5T752 114 aa6.79□□□□□ -1.32
DNMT1-217ENST00000589091 LCE4AQ5TA78 99 aa6.78□□□□□ -1.32
DNMT1-217ENST00000589091 COL5A1-AS1Q5SY13 56 aa6.75□□□□□ -1.33
DNMT1-217ENST00000589091 PRO0461Q9UI25 63 aa6.75□□□□□ -1.33
DNMT1-217ENST00000589091 MACF1Q9UPN3 7388 aaKnown RBP6.74□□□□□ -1.33
DNMT1-217ENST00000589091 C5orf47Q569G3 176 aa6.73□□□□□ -1.33
DNMT1-217ENST00000589091 TP53AIP1Q9HCN2 124 aa6.73□□□□□ -1.33
DNMT1-217ENST00000589091 S4R3F8 94 aa6.73□□□□□ -1.33
DNMT1-217ENST00000589091 FAM236AA0A1B0GUQ0 79 aa6.72□□□□□ -1.33
DNMT1-217ENST00000589091 FAM236BA0A1B0GV22 79 aa6.72□□□□□ -1.33
DNMT1-217ENST00000589091 K7EP34 96 aa6.72□□□□□ -1.33
DNMT1-217ENST00000589091 CSAG1Q6PB30 78 aa6.7□□□□□ -1.34
DNMT1-217ENST00000589091 C1orf64Q8NEQ6 169 aa6.7□□□□□ -1.34
DNMT1-217ENST00000589091 KRTAP3-1Q9BYR8 98 aa6.69□□□□□ -1.34
DNMT1-217ENST00000589091 KRTAP6-3Q3LI67 103 aa6.66□□□□□ -1.34
DNMT1-217ENST00000589091 GTF2H5Q6ZYL4 71 aa6.66□□□□□ -1.34
DNMT1-217ENST00000589091 LCA10Q71F78 164 aa6.65□□□□□ -1.34
DNMT1-217ENST00000589091 KRTAP4-7Q9BYR0 210 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms