RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 DSCR10P59022 87 aa8.16□□□□□ -1.1
NPC1-207ENST00000588867 CXCL6P80162 114 aa8.15□□□□□ -1.1
NPC1-207ENST00000588867 IMUPQ9GZP8 106 aa8.15□□□□□ -1.1
NPC1-207ENST00000588867 ATP5EP2Q5VTU8 51 aa8.15□□□□□ -1.11
NPC1-207ENST00000588867 Q8N9L7 120 aa8.15□□□□□ -1.11
NPC1-207ENST00000588867 A8MWP4 228 aa8.13□□□□□ -1.11
NPC1-207ENST00000588867 NDUFB1O75438 58 aa8.13□□□□□ -1.11
NPC1-207ENST00000588867 K7EQZ3 153 aa8.12□□□□□ -1.11
NPC1-207ENST00000588867 IGHV6-1A0A0B4J1U7 121 aa8.12□□□□□ -1.11
NPC1-207ENST00000588867 PRR4Q16378 134 aa8.12□□□□□ -1.11
NPC1-207ENST00000588867 HIST1H4AP62805 103 aaKnown RBP8.11□□□□□ -1.11
NPC1-207ENST00000588867 PRR15Q8IV56 129 aa8.1□□□□□ -1.11
NPC1-207ENST00000588867 A0A1B0GVX0 72 aa8.09□□□□□ -1.11
NPC1-207ENST00000588867 FP248Q71RG6 208 aaPredicted RBP8.09□□□□□ -1.11
NPC1-207ENST00000588867 IGLV7-46A0A075B6I9 117 aa8.08□□□□□ -1.12
NPC1-207ENST00000588867 FAM236AA0A1B0GUQ0 79 aa8.07□□□□□ -1.12
NPC1-207ENST00000588867 FAM236BA0A1B0GV22 79 aa8.07□□□□□ -1.12
NPC1-207ENST00000588867 UQCRQO14949 82 aa8.06□□□□□ -1.12
NPC1-207ENST00000588867 NOTCH2NLQ7Z3S9 236 aa8.05□□□□□ -1.12
NPC1-207ENST00000588867 C9orf92A6NGG3 77 aa8.04□□□□□ -1.12
NPC1-207ENST00000588867 LINC00313P59037 77 aa8.04□□□□□ -1.12
NPC1-207ENST00000588867 A0A087WVE0 104 aa8.03□□□□□ -1.12
NPC1-207ENST00000588867 C8orf17Q9NRJ1 99 aa8.03□□□□□ -1.12
NPC1-207ENST00000588867 C8orf87E5RJ46 101 aa8.01□□□□□ -1.13
NPC1-207ENST00000588867 WFDC13Q8IUB5 93 aa8.01□□□□□ -1.13
NPC1-207ENST00000588867 MMP24-AS1A0A0U1RRL7 71 aa8□□□□□ -1.13
NPC1-207ENST00000588867 COX7CP15954 63 aa8□□□□□ -1.13
NPC1-207ENST00000588867 HCG22E2RYF7 251 aa7.99□□□□□ -1.13
NPC1-207ENST00000588867 C5orf47Q569G3 176 aa7.99□□□□□ -1.13
NPC1-207ENST00000588867 hDV103S1A0JD37 113 aa7.98□□□□□ -1.13
NPC1-207ENST00000588867 ATOX1O00244 68 aa7.98□□□□□ -1.13
NPC1-207ENST00000588867 CASC2Q6XLA1 102 aa7.98□□□□□ -1.13
NPC1-207ENST00000588867 RPS28P62857 69 aaKnown RBP7.97□□□□□ -1.13
NPC1-207ENST00000588867 KRTAP13-3Q3SY46 172 aa7.96□□□□□ -1.13
NPC1-207ENST00000588867 TPRXLQ17RH7 258 aa7.93□□□□□ -1.14
NPC1-207ENST00000588867 TMEM254Q8TBM7 123 aa7.93□□□□□ -1.14
NPC1-207ENST00000588867 MRPL34Q9BQ48 92 aaKnown RBP7.93□□□□□ -1.14
NPC1-207ENST00000588867 KRTAP16-1A8MUX0 517 aa7.92□□□□□ -1.14
NPC1-207ENST00000588867 TMEM258P61165 79 aa7.91□□□□□ -1.14
NPC1-207ENST00000588867 HERC1Q15751 4861 aa7.9□□□□□ -1.14
NPC1-207ENST00000588867 NDUFS5O43920 106 aa7.9□□□□□ -1.14
NPC1-207ENST00000588867 XP32Q5T750 250 aa7.88□□□□□ -1.15
NPC1-207ENST00000588867 SERP2Q8N6R1 65 aa7.87□□□□□ -1.15
NPC1-207ENST00000588867 Q8N9P0 234 aaPredicted RBP7.86□□□□□ -1.15
NPC1-207ENST00000588867 C20orf166-AS1Q96NR2 134 aa7.85□□□□□ -1.15
NPC1-207ENST00000588867 A8MUU9 505 aa7.83□□□□□ -1.16
NPC1-207ENST00000588867 LPAP08519 4548 aa7.83□□□□□ -1.16
NPC1-207ENST00000588867 Q75L30 129 aa7.81□□□□□ -1.16
NPC1-207ENST00000588867 RPL37P61927 97 aaKnown RBP7.79□□□□□ -1.16
NPC1-207ENST00000588867 CYSTM1Q9H1C7 97 aa7.79□□□□□ -1.16
NPC1-207ENST00000588867 TP53AIP1Q9HCN2 124 aa7.78□□□□□ -1.16
NPC1-207ENST00000588867 ATP11AUNQ6ZP68 121 aa7.77□□□□□ -1.17
NPC1-207ENST00000588867 OCR1Q9BZK8 76 aa7.77□□□□□ -1.17
NPC1-207ENST00000588867 HMCN2Q8NDA2 5059 aa7.74□□□□□ -1.17
NPC1-207ENST00000588867 ZCCHC13Q8WW36 166 aaKnown RBP7.74□□□□□ -1.17
NPC1-207ENST00000588867 Q5W150 140 aa7.74□□□□□ -1.17
NPC1-207ENST00000588867 LRP2P98164 4655 aa7.73□□□□□ -1.17
NPC1-207ENST00000588867 TRAV7A0A075B6U4 112 aa7.72□□□□□ -1.17
NPC1-207ENST00000588867 PCOTHQ58A44 107 aa7.71□□□□□ -1.17
NPC1-207ENST00000588867 C4orf26Q17RF5 130 aa7.7□□□□□ -1.18
NPC1-207ENST00000588867 TRAV22A0A0B4J277 110 aa7.69□□□□□ -1.18
NPC1-207ENST00000588867 SEC61BP60468 96 aaKnown RBP7.69□□□□□ -1.18
NPC1-207ENST00000588867 FAM236DA0A1B0GTK5 79 aa7.68□□□□□ -1.18
NPC1-207ENST00000588867 H0Y9P7 68 aa7.68□□□□□ -1.18
NPC1-207ENST00000588867 FAM236CP0DP71 79 aa7.68□□□□□ -1.18
NPC1-207ENST00000588867 SERP1Q9Y6X1 66 aa7.67□□□□□ -1.18
NPC1-207ENST00000588867 MP68P56378 58 aa7.65□□□□□ -1.18
NPC1-207ENST00000588867 C20orf197Q8N268 126 aa7.64□□□□□ -1.19
NPC1-207ENST00000588867 LINC00208Q96KT6 92 aa7.62□□□□□ -1.19
NPC1-207ENST00000588867 IGKV2D-30A0A075B6S6 120 aa7.62□□□□□ -1.19
NPC1-207ENST00000588867 IGKV2-30P06310 120 aa7.62□□□□□ -1.19
NPC1-207ENST00000588867 H7BZZ5 65 aa7.61□□□□□ -1.19
NPC1-207ENST00000588867 C1orf64Q8NEQ6 169 aa7.61□□□□□ -1.19
NPC1-207ENST00000588867 KLKP1Q107X0 134 aa7.6□□□□□ -1.19
NPC1-207ENST00000588867 PRO0628Q9UI54 55 aa7.59□□□□□ -1.19
NPC1-207ENST00000588867 SPINK7P58062 85 aa7.59□□□□□ -1.19
NPC1-207ENST00000588867 SMIM26A0A096LP01 95 aa7.57□□□□□ -1.2
NPC1-207ENST00000588867 ATP5EP56381 51 aaPredicted RBP7.57□□□□□ -1.2
NPC1-207ENST00000588867 LOC101927531A0A1B0GV80 90 aa7.57□□□□□ -1.2
NPC1-207ENST00000588867 H3BPC8 53 aa7.57□□□□□ -1.2
NPC1-207ENST00000588867 NDUFC1O43677 76 aa7.57□□□□□ -1.2
NPC1-207ENST00000588867 C7orf65Q6ZTY9 151 aa7.56□□□□□ -1.2
NPC1-207ENST00000588867 SNURFQ9Y675 71 aa7.56□□□□□ -1.2
NPC1-207ENST00000588867 A0A0U1RQV1 116 aa7.54□□□□□ -1.2
NPC1-207ENST00000588867 CYP4F30PQ9H0H9 118 aa7.54□□□□□ -1.2
NPC1-207ENST00000588867 KRTAP4-1Q9BYQ7 146 aa7.53□□□□□ -1.2
NPC1-207ENST00000588867 MUC17Q685J3 4493 aa7.49□□□□□ -1.21
NPC1-207ENST00000588867 UBR4Q5T4S7 5183 aa7.45□□□□□ -1.22
NPC1-207ENST00000588867 HRES1P13985 223 aa7.44□□□□□ -1.22
NPC1-207ENST00000588867 RBM12B-AS1Q9P1G2 102 aa7.39□□□□□ -1.23
NPC1-207ENST00000588867 MUC2Q02817 5179 aa7.38□□□□□ -1.23
NPC1-207ENST00000588867 BRK1Q8WUW1 75 aa7.37□□□□□ -1.23
NPC1-207ENST00000588867 MPLKIPQ8TAP9 179 aa7.35□□□□□ -1.23
NPC1-207ENST00000588867 RNF213Q63HN8 5207 aa7.34□□□□□ -1.23
NPC1-207ENST00000588867 COX6B2Q6YFQ2 88 aa7.34□□□□□ -1.24
NPC1-207ENST00000588867 V9GYY9 64 aa7.32□□□□□ -1.24
NPC1-207ENST00000588867 SPANXA2-OT1Q8N9U9 137 aa7.29□□□□□ -1.24
NPC1-207ENST00000588867 KRTAP3-1Q9BYR8 98 aa7.29□□□□□ -1.24
NPC1-207ENST00000588867 KRTAP19-2Q3LHN2 52 aa7.25□□□□□ -1.25
NPC1-207ENST00000588867 DMAC1Q96GE9 116 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms