RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 MUC2Q02817 5179 aa10.24□□□□□ -0.77
CLPTM1-209ENST00000588855 SEC61BP60468 96 aaKnown RBP10.23□□□□□ -0.77
CLPTM1-209ENST00000588855 Q6ZVQ6 151 aa10.23□□□□□ -0.77
CLPTM1-209ENST00000588855 NOTCH2NLQ7Z3S9 236 aa10.23□□□□□ -0.77
CLPTM1-209ENST00000588855 LINC00846Q9NV44 126 aa10.23□□□□□ -0.77
CLPTM1-209ENST00000588855 LINC00313P59037 77 aa10.22□□□□□ -0.77
CLPTM1-209ENST00000588855 RPL37P61927 97 aaKnown RBP10.22□□□□□ -0.77
CLPTM1-209ENST00000588855 A8MWP4 228 aa10.2□□□□□ -0.78
CLPTM1-209ENST00000588855 IGKV3D-7A0A0C4DH55 119 aa10.18□□□□□ -0.78
CLPTM1-209ENST00000588855 NDUFB1O75438 58 aa10.18□□□□□ -0.78
CLPTM1-209ENST00000588855 KRTAP16-1A8MUX0 517 aa10.17□□□□□ -0.78
CLPTM1-209ENST00000588855 C8orf87E5RJ46 101 aa10.17□□□□□ -0.78
CLPTM1-209ENST00000588855 PCOTHQ58A44 107 aa10.17□□□□□ -0.78
CLPTM1-209ENST00000588855 BPY2O14599 106 aa10.16□□□□□ -0.78
CLPTM1-209ENST00000588855 Q75L30 129 aa10.16□□□□□ -0.78
CLPTM1-209ENST00000588855 UBL5Q9BZL1 73 aa10.16□□□□□ -0.78
CLPTM1-209ENST00000588855 C20orf166-AS1Q96NR2 134 aa10.15□□□□□ -0.78
CLPTM1-209ENST00000588855 A8MUU9 505 aa10.12□□□□□ -0.79
CLPTM1-209ENST00000588855 PRR15Q8IV56 129 aa10.12□□□□□ -0.79
CLPTM1-209ENST00000588855 K7EQZ3 153 aa10.12□□□□□ -0.79
CLPTM1-209ENST00000588855 KRTAP4-1Q9BYQ7 146 aa10.11□□□□□ -0.79
CLPTM1-209ENST00000588855 C8orf17Q9NRJ1 99 aa10.11□□□□□ -0.79
CLPTM1-209ENST00000588855 Q8N9L7 120 aa10.07□□□□□ -0.8
CLPTM1-209ENST00000588855 FAM240AA0A1B0GVK7 77 aa10.06□□□□□ -0.8
CLPTM1-209ENST00000588855 ACYP1P07311 99 aa10.06□□□□□ -0.8
CLPTM1-209ENST00000588855 ATP11AUNQ6ZP68 121 aa10.06□□□□□ -0.8
CLPTM1-209ENST00000588855 MMP24-AS1A0A0U1RRL7 71 aa10.05□□□□□ -0.8
CLPTM1-209ENST00000588855 Q8N9P0 234 aaPredicted RBP9.99□□□□□ -0.81
CLPTM1-209ENST00000588855 TMEM254Q8TBM7 123 aa9.98□□□□□ -0.81
CLPTM1-209ENST00000588855 hDV103S1A0JD37 113 aa9.97□□□□□ -0.81
CLPTM1-209ENST00000588855 CXCL6P80162 114 aa9.97□□□□□ -0.81
CLPTM1-209ENST00000588855 FAT4Q6V0I7 4981 aa9.96□□□□□ -0.81
CLPTM1-209ENST00000588855 MRPL34Q9BQ48 92 aaKnown RBP9.96□□□□□ -0.82
CLPTM1-209ENST00000588855 WFDC13Q8IUB5 93 aa9.95□□□□□ -0.82
CLPTM1-209ENST00000588855 CASC2Q6XLA1 102 aa9.92□□□□□ -0.82
CLPTM1-209ENST00000588855 J3QR89 54 aa9.91□□□□□ -0.82
CLPTM1-209ENST00000588855 ZCCHC13Q8WW36 166 aaKnown RBP9.9□□□□□ -0.82
CLPTM1-209ENST00000588855 HCG22E2RYF7 251 aa9.89□□□□□ -0.83
CLPTM1-209ENST00000588855 ATP5EP2Q5VTU8 51 aa9.89□□□□□ -0.83
CLPTM1-209ENST00000588855 A0A0U1RQV1 116 aa9.88□□□□□ -0.83
CLPTM1-209ENST00000588855 NDUFS5O43920 106 aa9.87□□□□□ -0.83
CLPTM1-209ENST00000588855 LINC00643Q86TS7 51 aa9.86□□□□□ -0.83
CLPTM1-209ENST00000588855 KRTAP19-2Q3LHN2 52 aa9.8□□□□□ -0.84
CLPTM1-209ENST00000588855 HIST1H4AP62805 103 aaKnown RBP9.79□□□□□ -0.84
CLPTM1-209ENST00000588855 K7ERU9 68 aa9.76□□□□□ -0.85
CLPTM1-209ENST00000588855 LCE2CQ5TA81 110 aa9.74□□□□□ -0.85
CLPTM1-209ENST00000588855 Q5W150 140 aa9.74□□□□□ -0.85
CLPTM1-209ENST00000588855 A0A087WVE0 104 aa9.73□□□□□ -0.85
CLPTM1-209ENST00000588855 SPINK7P58062 85 aa9.72□□□□□ -0.85
CLPTM1-209ENST00000588855 HRES1P13985 223 aa9.7□□□□□ -0.86
CLPTM1-209ENST00000588855 COX6B2Q6YFQ2 88 aa9.68□□□□□ -0.86
CLPTM1-209ENST00000588855 LCE2AQ5TA79 106 aaPredicted RBP9.67□□□□□ -0.86
CLPTM1-209ENST00000588855 FLGP20930 4061 aaPredicted RBP9.66□□□□□ -0.86
CLPTM1-209ENST00000588855 TP53AIP1Q9HCN2 124 aa9.65□□□□□ -0.86
CLPTM1-209ENST00000588855 MPLKIPQ8TAP9 179 aa9.64□□□□□ -0.87
CLPTM1-209ENST00000588855 IGKV2D-30A0A075B6S6 120 aa9.61□□□□□ -0.87
CLPTM1-209ENST00000588855 IGKV2-30P06310 120 aa9.61□□□□□ -0.87
CLPTM1-209ENST00000588855 C7orf65Q6ZTY9 151 aa9.6□□□□□ -0.87
CLPTM1-209ENST00000588855 MT1HP80294 61 aa9.59□□□□□ -0.87
CLPTM1-209ENST00000588855 RBM12B-AS1Q9P1G2 102 aa9.59□□□□□ -0.87
CLPTM1-209ENST00000588855 MT-ATP8P03928 68 aa9.58□□□□□ -0.88
CLPTM1-209ENST00000588855 FAM236DA0A1B0GTK5 79 aa9.56□□□□□ -0.88
CLPTM1-209ENST00000588855 FAM236CP0DP71 79 aa9.56□□□□□ -0.88
CLPTM1-209ENST00000588855 TRAV22A0A0B4J277 110 aa9.51□□□□□ -0.89
CLPTM1-209ENST00000588855 IMUPQ9GZP8 106 aa9.51□□□□□ -0.89
CLPTM1-209ENST00000588855 UQCRQO14949 82 aa9.51□□□□□ -0.89
CLPTM1-209ENST00000588855 OCR1Q9BZK8 76 aa9.47□□□□□ -0.89
CLPTM1-209ENST00000588855 H0Y9P7 68 aa9.45□□□□□ -0.9
CLPTM1-209ENST00000588855 M0R2T5 61 aa9.43□□□□□ -0.9
CLPTM1-209ENST00000588855 SCGB1A1P11684 91 aa9.42□□□□□ -0.9
CLPTM1-209ENST00000588855 LOC101927531A0A1B0GV80 90 aa9.41□□□□□ -0.9
CLPTM1-209ENST00000588855 C4orf26Q17RF5 130 aa9.41□□□□□ -0.9
CLPTM1-209ENST00000588855 CYP4F30PQ9H0H9 118 aa9.41□□□□□ -0.9
CLPTM1-209ENST00000588855 ATOX1O00244 68 aa9.4□□□□□ -0.91
CLPTM1-209ENST00000588855 FAM236AA0A1B0GUQ0 79 aa9.39□□□□□ -0.91
CLPTM1-209ENST00000588855 FAM236BA0A1B0GV22 79 aa9.39□□□□□ -0.91
CLPTM1-209ENST00000588855 C1orf64Q8NEQ6 169 aa9.34□□□□□ -0.91
CLPTM1-209ENST00000588855 MP68P56378 58 aa9.33□□□□□ -0.92
CLPTM1-209ENST00000588855 KRTAP10-6P60371 365 aaPredicted RBP9.33□□□□□ -0.92
CLPTM1-209ENST00000588855 LINC00208Q96KT6 92 aa9.33□□□□□ -0.92
CLPTM1-209ENST00000588855 C5orf47Q569G3 176 aa9.32□□□□□ -0.92
CLPTM1-209ENST00000588855 H1FX-AS1Q4G0G2 97 aa9.31□□□□□ -0.92
CLPTM1-209ENST00000588855 LORP23490 312 aaPredicted RBP9.31□□□□□ -0.92
CLPTM1-209ENST00000588855 KRTAP3-1Q9BYR8 98 aa9.28□□□□□ -0.92
CLPTM1-209ENST00000588855 TRAV7A0A075B6U4 112 aa9.26□□□□□ -0.93
CLPTM1-209ENST00000588855 SMIM20Q8N5G0 67 aa9.26□□□□□ -0.93
CLPTM1-209ENST00000588855 H3BPC8 53 aa9.25□□□□□ -0.93
CLPTM1-209ENST00000588855 KLKP1Q107X0 134 aa9.24□□□□□ -0.93
CLPTM1-209ENST00000588855 KRTAP9-8Q9BYQ0 159 aa9.14□□□□□ -0.95
CLPTM1-209ENST00000588855 S4R3F8 94 aa9.12□□□□□ -0.95
CLPTM1-209ENST00000588855 SERP2Q8N6R1 65 aa9.1□□□□□ -0.95
CLPTM1-209ENST00000588855 LCA10Q71F78 164 aa9.08□□□□□ -0.96
CLPTM1-209ENST00000588855 MT2AP02795 61 aa9.06□□□□□ -0.96
CLPTM1-209ENST00000588855 SNURFQ9Y675 71 aa9.05□□□□□ -0.96
CLPTM1-209ENST00000588855 A8MUN3 132 aa9.04□□□□□ -0.96
CLPTM1-209ENST00000588855 C20orf197Q8N268 126 aa9.02□□□□□ -0.97
CLPTM1-209ENST00000588855 KRTAP9-2Q9BYQ4 174 aa9.02□□□□□ -0.97
CLPTM1-209ENST00000588855 MT1FP04733 61 aa9□□□□□ -0.97
CLPTM1-209ENST00000588855 LCE2DQ5TA82 110 aaPredicted RBP9□□□□□ -0.97
CLPTM1-209ENST00000588855 KRTAP3-3Q9BYR6 98 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms