RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 KRTAP4-6Q9BYQ5 205 aa8.83□□□□□ -1
CCDC43-204ENST00000588687 ORMDL1Q9P0S3 153 aa8.83□□□□□ -1
CCDC43-204ENST00000588687 A6NJY4 79 aa8.82□□□□□ -1
CCDC43-204ENST00000588687 TRACP01848 142 aa8.82□□□□□ -1
CCDC43-204ENST00000588687 S100A6P06703 90 aa8.81□□□□□ -1
CCDC43-204ENST00000588687 PAM16Q9Y3D7 125 aa8.81□□□□□ -1
CCDC43-204ENST00000588687 A8MWP4 228 aa8.8□□□□□ -1
CCDC43-204ENST00000588687 SPATA45Q537H7 98 aa8.8□□□□□ -1
CCDC43-204ENST00000588687 KRTAP6-3Q3LI67 103 aa8.79□□□□□ -1
CCDC43-204ENST00000588687 TMEM238LA0A1B0GVL6 79 aa8.78□□□□□ -1
CCDC43-204ENST00000588687 DNAL4O96015 105 aa8.78□□□□□ -1
CCDC43-204ENST00000588687 H3BQ85 93 aa8.77□□□□□ -1.01
CCDC43-204ENST00000588687 TMEM256-PLSCR3K7ERE1 68 aa8.77□□□□□ -1.01
CCDC43-204ENST00000588687 Q8N9P0 234 aaPredicted RBP8.75□□□□□ -1.01
CCDC43-204ENST00000588687 NEBP20929 6669 aa8.74□□□□□ -1.01
CCDC43-204ENST00000588687 UBE2V1Q13404 147 aa8.73□□□□□ -1.01
CCDC43-204ENST00000588687 WFDC13Q8IUB5 93 aa8.73□□□□□ -1.01
CCDC43-204ENST00000588687 K7ERJ3 54 aa8.72□□□□□ -1.01
CCDC43-204ENST00000588687 VAMP8Q9BV40 100 aa8.72□□□□□ -1.01
CCDC43-204ENST00000588687 VPS25Q9BRG1 176 aa8.69□□□□□ -1.02
CCDC43-204ENST00000588687 J3KT08 172 aa8.67□□□□□ -1.02
CCDC43-204ENST00000588687 PSMB2P49721 201 aa8.67□□□□□ -1.02
CCDC43-204ENST00000588687 RBM3P98179 157 aaKnown RBP8.64□□□□□ -1.03
CCDC43-204ENST00000588687 MUC12Q9UKN1 5478 aa8.64□□□□□ -1.03
CCDC43-204ENST00000588687 HSD52Q0P140 79 aa8.63□□□□□ -1.03
CCDC43-204ENST00000588687 Q6ZQT0 140 aa8.63□□□□□ -1.03
CCDC43-204ENST00000588687 COX6CP09669 75 aa8.62□□□□□ -1.03
CCDC43-204ENST00000588687 S100A1P23297 94 aa8.62□□□□□ -1.03
CCDC43-204ENST00000588687 C8orf17Q9NRJ1 99 aa8.62□□□□□ -1.03
CCDC43-204ENST00000588687 DSCR8Q96T75 97 aa8.61□□□□□ -1.03
CCDC43-204ENST00000588687 C21orf62-AS1Q17RA5 79 aa8.58□□□□□ -1.04
CCDC43-204ENST00000588687 IGKV3D-7A0A0C4DH55 119 aa8.57□□□□□ -1.04
CCDC43-204ENST00000588687 NDUFB1O75438 58 aa8.56□□□□□ -1.04
CCDC43-204ENST00000588687 C9JAW5 83 aa8.55□□□□□ -1.04
CCDC43-204ENST00000588687 H1FX-AS1Q4G0G2 97 aa8.54□□□□□ -1.04
CCDC43-204ENST00000588687 Q6ZVQ6 151 aa8.54□□□□□ -1.04
CCDC43-204ENST00000588687 LYRM7Q5U5X0 104 aa8.53□□□□□ -1.04
CCDC43-204ENST00000588687 BAALC-AS2P0C853 105 aa8.49□□□□□ -1.05
CCDC43-204ENST00000588687 PYY3Q5JQD4 70 aa8.48□□□□□ -1.05
CCDC43-204ENST00000588687 MMP24-AS1A0A0U1RRL7 71 aa8.47□□□□□ -1.05
CCDC43-204ENST00000588687 PRR15Q8IV56 129 aa8.47□□□□□ -1.05
CCDC43-204ENST00000588687 LOC110117498A0A087WWA1 95 aa8.46□□□□□ -1.06
CCDC43-204ENST00000588687 A0A1B0GW54 56 aa8.46□□□□□ -1.06
CCDC43-204ENST00000588687 SCGB1C2P0DMR2 95 aa8.45□□□□□ -1.06
CCDC43-204ENST00000588687 TMEM254Q8TBM7 123 aa8.44□□□□□ -1.06
CCDC43-204ENST00000588687 MRPL34Q9BQ48 92 aaKnown RBP8.44□□□□□ -1.06
CCDC43-204ENST00000588687 MT1BP07438 61 aa8.42□□□□□ -1.06
CCDC43-204ENST00000588687 JMJD7-PLA2G4BH0Y9G9 81 aa8.39□□□□□ -1.07
CCDC43-204ENST00000588687 UQCR10Q9UDW1 63 aa8.39□□□□□ -1.07
CCDC43-204ENST00000588687 A6NN06 94 aa8.37□□□□□ -1.07
CCDC43-204ENST00000588687 MDN1Q9NU22 5596 aa8.36□□□□□ -1.07
CCDC43-204ENST00000588687 C14orf132Q9NPU4 83 aa8.36□□□□□ -1.07
CCDC43-204ENST00000588687 IGKV2D-30A0A075B6S6 120 aa8.35□□□□□ -1.07
CCDC43-204ENST00000588687 K7EQZ3 153 aa8.35□□□□□ -1.07
CCDC43-204ENST00000588687 IGKV2-30P06310 120 aa8.35□□□□□ -1.07
CCDC43-204ENST00000588687 PDE6GP18545 87 aa8.35□□□□□ -1.07
CCDC43-204ENST00000588687 Q5W150 140 aa8.35□□□□□ -1.07
CCDC43-204ENST00000588687 KMT2DO14686 5537 aa8.34□□□□□ -1.07
CCDC43-204ENST00000588687 hDV103S1A0JD37 113 aa8.34□□□□□ -1.07
CCDC43-204ENST00000588687 C7orf65Q6ZTY9 151 aa8.34□□□□□ -1.07
CCDC43-204ENST00000588687 ATXN8Q156A1 80 aa8.32□□□□□ -1.08
CCDC43-204ENST00000588687 KRTAP19-8Q3LI54 63 aa8.32□□□□□ -1.08
CCDC43-204ENST00000588687 NREPQ16612 68 aa8.31□□□□□ -1.08
CCDC43-204ENST00000588687 NDUFS5O43920 106 aa8.3□□□□□ -1.08
CCDC43-204ENST00000588687 KRTAP20-1Q3LI63 56 aa8.3□□□□□ -1.08
CCDC43-204ENST00000588687 KRTAP5-9P26371 169 aa8.29□□□□□ -1.08
CCDC43-204ENST00000588687 NAA38Q9BRA0 125 aaKnown RBP8.29□□□□□ -1.08
CCDC43-204ENST00000588687 SPRR2GQ9BYE4 73 aa8.29□□□□□ -1.08
CCDC43-204ENST00000588687 KRTAP10-5P60370 271 aa8.27□□□□□ -1.09
CCDC43-204ENST00000588687 C4orf26Q17RF5 130 aa8.27□□□□□ -1.09
CCDC43-204ENST00000588687 Q5VV11 94 aa8.27□□□□□ -1.09
CCDC43-204ENST00000588687 C5orf47Q569G3 176 aa8.25□□□□□ -1.09
CCDC43-204ENST00000588687 FAM236AA0A1B0GUQ0 79 aa8.22□□□□□ -1.09
CCDC43-204ENST00000588687 FAM236BA0A1B0GV22 79 aa8.22□□□□□ -1.09
CCDC43-204ENST00000588687 KRTAP3-1Q9BYR8 98 aa8.22□□□□□ -1.09
CCDC43-204ENST00000588687 HCG22E2RYF7 251 aa8.15□□□□□ -1.1
CCDC43-204ENST00000588687 Q8N9L7 120 aa8.15□□□□□ -1.1
CCDC43-204ENST00000588687 BPY2O14599 106 aa8.14□□□□□ -1.11
CCDC43-204ENST00000588687 M0R143 59 aa8.13□□□□□ -1.11
CCDC43-204ENST00000588687 CASC2Q6XLA1 102 aa8.13□□□□□ -1.11
CCDC43-204ENST00000588687 LCA10Q71F78 164 aa8.13□□□□□ -1.11
CCDC43-204ENST00000588687 S4R3F8 94 aa8.13□□□□□ -1.11
CCDC43-204ENST00000588687 CXCL6P80162 114 aa8.09□□□□□ -1.11
CCDC43-204ENST00000588687 CSAG1Q6PB30 78 aa8.09□□□□□ -1.11
CCDC43-204ENST00000588687 KLKP1Q107X0 134 aa8.08□□□□□ -1.12
CCDC43-204ENST00000588687 KRTAP4-8Q9BYQ9 185 aa8.08□□□□□ -1.12
CCDC43-204ENST00000588687 H3BT86 120 aa8.05□□□□□ -1.12
CCDC43-204ENST00000588687 C1orf64Q8NEQ6 169 aa8.03□□□□□ -1.12
CCDC43-204ENST00000588687 SVIPQ8NHG7 77 aa8.03□□□□□ -1.12
CCDC43-204ENST00000588687 KRTAP2-3P0C7H8 128 aa7.97□□□□□ -1.13
CCDC43-204ENST00000588687 KRTAP2-4Q9BYR9 128 aa7.97□□□□□ -1.13
CCDC43-204ENST00000588687 CRIPTQ9P021 101 aa7.91□□□□□ -1.14
CCDC43-204ENST00000588687 IMUPQ9GZP8 106 aa7.9□□□□□ -1.14
CCDC43-204ENST00000588687 A0A1W2PPM0 123 aa7.89□□□□□ -1.15
CCDC43-204ENST00000588687 C9orf118A6NHY6 69 aa7.89□□□□□ -1.15
CCDC43-204ENST00000588687 A0A087WVE0 104 aa7.88□□□□□ -1.15
CCDC43-204ENST00000588687 TSTD3H0UI37 97 aa7.88□□□□□ -1.15
CCDC43-204ENST00000588687 BATFQ16520 125 aa7.88□□□□□ -1.15
CCDC43-204ENST00000588687 SPRR2FQ96RM1 72 aa7.87□□□□□ -1.15
CCDC43-204ENST00000588687 TAX1BP3O14907 124 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 159.2 ms