RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 Q5XG85 94 aa11.38□□□□□ -0.59
ATG4D-208ENST00000588667 UBR4Q5T4S7 5183 aa11.36□□□□□ -0.59
ATG4D-208ENST00000588667 ASB16-AS1Q495Z4 193 aa11.36□□□□□ -0.59
ATG4D-208ENST00000588667 SCGB1A1P11684 91 aa11.35□□□□□ -0.59
ATG4D-208ENST00000588667 DSCR10P59022 87 aa11.35□□□□□ -0.59
ATG4D-208ENST00000588667 Q96NJ1 140 aa11.35□□□□□ -0.59
ATG4D-208ENST00000588667 A0A087WVE0 104 aa11.32□□□□□ -0.6
ATG4D-208ENST00000588667 TPRXLQ17RH7 258 aa11.32□□□□□ -0.6
ATG4D-208ENST00000588667 Q8N9L7 120 aa11.32□□□□□ -0.6
ATG4D-208ENST00000588667 IGKV4-1P06312 121 aa11.31□□□□□ -0.6
ATG4D-208ENST00000588667 A8MWP4 228 aa11.3□□□□□ -0.6
ATG4D-208ENST00000588667 K7EQZ3 153 aa11.29□□□□□ -0.6
ATG4D-208ENST00000588667 NDUFB1O75438 58 aa11.27□□□□□ -0.6
ATG4D-208ENST00000588667 FAM236AA0A1B0GUQ0 79 aa11.27□□□□□ -0.61
ATG4D-208ENST00000588667 FAM236BA0A1B0GV22 79 aa11.27□□□□□ -0.61
ATG4D-208ENST00000588667 PRR15Q8IV56 129 aa11.25□□□□□ -0.61
ATG4D-208ENST00000588667 C1orf195Q5TG92 126 aa11.24□□□□□ -0.61
ATG4D-208ENST00000588667 KRTAP13-3Q3SY46 172 aa11.23□□□□□ -0.61
ATG4D-208ENST00000588667 A0A1B0GVX0 72 aa11.18□□□□□ -0.62
ATG4D-208ENST00000588667 HCG22E2RYF7 251 aa11.17□□□□□ -0.62
ATG4D-208ENST00000588667 IGHV6-1A0A0B4J1U7 121 aa11.15□□□□□ -0.62
ATG4D-208ENST00000588667 ATOX1O00244 68 aa11.15□□□□□ -0.62
ATG4D-208ENST00000588667 CASC2Q6XLA1 102 aa11.1□□□□□ -0.63
ATG4D-208ENST00000588667 WFDC13Q8IUB5 93 aa11.1□□□□□ -0.63
ATG4D-208ENST00000588667 ANAPC13Q9BS18 74 aa11.1□□□□□ -0.63
ATG4D-208ENST00000588667 C8orf17Q9NRJ1 99 aa11.1□□□□□ -0.63
ATG4D-208ENST00000588667 MMP24-AS1A0A0U1RRL7 71 aa11.09□□□□□ -0.63
ATG4D-208ENST00000588667 C8orf87E5RJ46 101 aa11.08□□□□□ -0.64
ATG4D-208ENST00000588667 RNF213Q63HN8 5207 aa11.07□□□□□ -0.64
ATG4D-208ENST00000588667 hDV103S1A0JD37 113 aa11.06□□□□□ -0.64
ATG4D-208ENST00000588667 SMIM20Q8N5G0 67 aa11.06□□□□□ -0.64
ATG4D-208ENST00000588667 PCP4P48539 62 aa11.05□□□□□ -0.64
ATG4D-208ENST00000588667 C9orf92A6NGG3 77 aa11.03□□□□□ -0.64
ATG4D-208ENST00000588667 XP32Q5T750 250 aa11.03□□□□□ -0.64
ATG4D-208ENST00000588667 MUC17Q685J3 4493 aa11.03□□□□□ -0.64
ATG4D-208ENST00000588667 LINC00313P59037 77 aa11.02□□□□□ -0.64
ATG4D-208ENST00000588667 NOTCH2NLQ7Z3S9 236 aa11.02□□□□□ -0.65
ATG4D-208ENST00000588667 TMEM254Q8TBM7 123 aa11□□□□□ -0.65
ATG4D-208ENST00000588667 SERP2Q8N6R1 65 aa10.99□□□□□ -0.65
ATG4D-208ENST00000588667 TRAV7A0A075B6U4 112 aa10.98□□□□□ -0.65
ATG4D-208ENST00000588667 MRPL34Q9BQ48 92 aaKnown RBP10.98□□□□□ -0.65
ATG4D-208ENST00000588667 OCR1Q9BZK8 76 aa10.97□□□□□ -0.65
ATG4D-208ENST00000588667 SEC61BP60468 96 aaKnown RBP10.95□□□□□ -0.66
ATG4D-208ENST00000588667 COX7CP15954 63 aa10.93□□□□□ -0.66
ATG4D-208ENST00000588667 MUC2Q02817 5179 aa10.93□□□□□ -0.66
ATG4D-208ENST00000588667 NDUFS5O43920 106 aa10.9□□□□□ -0.66
ATG4D-208ENST00000588667 UQCRQO14949 82 aa10.89□□□□□ -0.67
ATG4D-208ENST00000588667 TP53AIP1Q9HCN2 124 aa10.89□□□□□ -0.67
ATG4D-208ENST00000588667 KRTAP16-1A8MUX0 517 aa10.88□□□□□ -0.67
ATG4D-208ENST00000588667 Q8N9P0 234 aaPredicted RBP10.85□□□□□ -0.67
ATG4D-208ENST00000588667 RPL37P61927 97 aaKnown RBP10.84□□□□□ -0.67
ATG4D-208ENST00000588667 C5orf47Q569G3 176 aa10.83□□□□□ -0.68
ATG4D-208ENST00000588667 CCDC179H3BU77 68 aa10.82□□□□□ -0.68
ATG4D-208ENST00000588667 PCOTHQ58A44 107 aa10.8□□□□□ -0.68
ATG4D-208ENST00000588667 MP68P56378 58 aa10.77□□□□□ -0.68
ATG4D-208ENST00000588667 C20orf197Q8N268 126 aa10.77□□□□□ -0.68
ATG4D-208ENST00000588667 TRAV22A0A0B4J277 110 aa10.76□□□□□ -0.69
ATG4D-208ENST00000588667 Q75L30 129 aa10.76□□□□□ -0.69
ATG4D-208ENST00000588667 KRTAP4-1Q9BYQ7 146 aa10.76□□□□□ -0.69
ATG4D-208ENST00000588667 A0A0U1RQV1 116 aa10.75□□□□□ -0.69
ATG4D-208ENST00000588667 H0Y9P7 68 aa10.75□□□□□ -0.69
ATG4D-208ENST00000588667 C20orf166-AS1Q96NR2 134 aa10.73□□□□□ -0.69
ATG4D-208ENST00000588667 A8MUU9 505 aa10.71□□□□□ -0.69
ATG4D-208ENST00000588667 H3BPC8 53 aa10.71□□□□□ -0.69
ATG4D-208ENST00000588667 KLKP1Q107X0 134 aa10.71□□□□□ -0.69
ATG4D-208ENST00000588667 SNURFQ9Y675 71 aa10.69□□□□□ -0.7
ATG4D-208ENST00000588667 Q5W150 140 aa10.67□□□□□ -0.7
ATG4D-208ENST00000588667 ATP11AUNQ6ZP68 121 aa10.67□□□□□ -0.7
ATG4D-208ENST00000588667 LINC00208Q96KT6 92 aa10.67□□□□□ -0.7
ATG4D-208ENST00000588667 C1orf64Q8NEQ6 169 aa10.64□□□□□ -0.71
ATG4D-208ENST00000588667 ZCCHC13Q8WW36 166 aaKnown RBP10.63□□□□□ -0.71
ATG4D-208ENST00000588667 FAT4Q6V0I7 4981 aa10.62□□□□□ -0.71
ATG4D-208ENST00000588667 NDUFC1O43677 76 aa10.61□□□□□ -0.71
ATG4D-208ENST00000588667 CYSTM1Q9H1C7 97 aa10.6□□□□□ -0.71
ATG4D-208ENST00000588667 LOC101927531A0A1B0GV80 90 aa10.59□□□□□ -0.71
ATG4D-208ENST00000588667 H7BZZ5 65 aa10.54□□□□□ -0.72
ATG4D-208ENST00000588667 IGKV2-30P06310 120 aa10.51□□□□□ -0.73
ATG4D-208ENST00000588667 CYP4F30PQ9H0H9 118 aa10.5□□□□□ -0.73
ATG4D-208ENST00000588667 IGKV2D-30A0A075B6S6 120 aa10.47□□□□□ -0.73
ATG4D-208ENST00000588667 TMEM258P61165 79 aa10.47□□□□□ -0.73
ATG4D-208ENST00000588667 KRTAP19-2Q3LHN2 52 aa10.45□□□□□ -0.74
ATG4D-208ENST00000588667 LCE2AQ5TA79 106 aaPredicted RBP10.45□□□□□ -0.74
ATG4D-208ENST00000588667 C7orf65Q6ZTY9 151 aa10.44□□□□□ -0.74
ATG4D-208ENST00000588667 LCE2CQ5TA81 110 aa10.41□□□□□ -0.74
ATG4D-208ENST00000588667 FAM236DA0A1B0GTK5 79 aa10.37□□□□□ -0.75
ATG4D-208ENST00000588667 FAM236CP0DP71 79 aa10.37□□□□□ -0.75
ATG4D-208ENST00000588667 SPANXA2-OT1Q8N9U9 137 aa10.37□□□□□ -0.75
ATG4D-208ENST00000588667 ATP5EP56381 51 aaPredicted RBP10.36□□□□□ -0.75
ATG4D-208ENST00000588667 SPINK7P58062 85 aa10.36□□□□□ -0.75
ATG4D-208ENST00000588667 COX6B2Q6YFQ2 88 aa10.34□□□□□ -0.75
ATG4D-208ENST00000588667 HRES1P13985 223 aa10.32□□□□□ -0.76
ATG4D-208ENST00000588667 MT1HP80294 61 aa10.26□□□□□ -0.77
ATG4D-208ENST00000588667 FLGP20930 4061 aaPredicted RBP10.24□□□□□ -0.77
ATG4D-208ENST00000588667 MPLKIPQ8TAP9 179 aa10.21□□□□□ -0.78
ATG4D-208ENST00000588667 RBM12B-AS1Q9P1G2 102 aa10.19□□□□□ -0.78
ATG4D-208ENST00000588667 C4orf26Q17RF5 130 aa10.18□□□□□ -0.78
ATG4D-208ENST00000588667 DMAC1Q96GE9 116 aa10.16□□□□□ -0.78
ATG4D-208ENST00000588667 SERP1Q9Y6X1 66 aa10.14□□□□□ -0.79
ATG4D-208ENST00000588667 A8MUN3 132 aa10.11□□□□□ -0.79
ATG4D-208ENST00000588667 ACYP2P14621 99 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms