RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 C8orf87E5RJ46 101 aa10.03□□□□□ -0.8
TPM4-208ENST00000588410 J3KT08 172 aa10.03□□□□□ -0.8
TPM4-208ENST00000588410 LYRM7Q5U5X0 104 aa10.03□□□□□ -0.8
TPM4-208ENST00000588410 TSTD3H0UI37 97 aa10.02□□□□□ -0.81
TPM4-208ENST00000588410 Q6ZQT0 140 aa10.01□□□□□ -0.81
TPM4-208ENST00000588410 BATFQ16520 125 aa10□□□□□ -0.81
TPM4-208ENST00000588410 FSIP2Q5CZC0 6907 aa10□□□□□ -0.81
TPM4-208ENST00000588410 FLGP20930 4061 aaPredicted RBP9.98□□□□□ -0.81
TPM4-208ENST00000588410 PDE6GP18545 87 aa9.98□□□□□ -0.81
TPM4-208ENST00000588410 LOC110117498A0A087WWA1 95 aa9.97□□□□□ -0.81
TPM4-208ENST00000588410 NDUFB1O75438 58 aa9.97□□□□□ -0.81
TPM4-208ENST00000588410 A0A1B0GW54 56 aa9.96□□□□□ -0.82
TPM4-208ENST00000588410 FAM236DA0A1B0GTK5 79 aa9.94□□□□□ -0.82
TPM4-208ENST00000588410 FAM236CP0DP71 79 aa9.94□□□□□ -0.82
TPM4-208ENST00000588410 C14orf132Q9NPU4 83 aa9.94□□□□□ -0.82
TPM4-208ENST00000588410 RBM12B-AS1Q9P1G2 102 aa9.91□□□□□ -0.82
TPM4-208ENST00000588410 A8MWP4 228 aa9.88□□□□□ -0.83
TPM4-208ENST00000588410 ZCCHC13Q8WW36 166 aaKnown RBP9.87□□□□□ -0.83
TPM4-208ENST00000588410 C9orf118A6NHY6 69 aa9.86□□□□□ -0.83
TPM4-208ENST00000588410 HRES1P13985 223 aa9.86□□□□□ -0.83
TPM4-208ENST00000588410 NREPQ16612 68 aa9.85□□□□□ -0.83
TPM4-208ENST00000588410 C8orf17Q9NRJ1 99 aa9.85□□□□□ -0.83
TPM4-208ENST00000588410 LOC105371267A0A1B0GV96 52 aa9.84□□□□□ -0.83
TPM4-208ENST00000588410 IGKV3D-7A0A0C4DH55 119 aa9.82□□□□□ -0.84
TPM4-208ENST00000588410 A0A1W2PPM0 123 aa9.82□□□□□ -0.84
TPM4-208ENST00000588410 H3BT86 120 aa9.82□□□□□ -0.84
TPM4-208ENST00000588410 Q8N9P0 234 aaPredicted RBP9.82□□□□□ -0.84
TPM4-208ENST00000588410 TAX1BP3O14907 124 aa9.81□□□□□ -0.84
TPM4-208ENST00000588410 MPLKIPQ8TAP9 179 aa9.81□□□□□ -0.84
TPM4-208ENST00000588410 MTURNQ8N3F0 131 aa9.79□□□□□ -0.84
TPM4-208ENST00000588410 SPINK7P58062 85 aa9.78□□□□□ -0.84
TPM4-208ENST00000588410 PRR15Q8IV56 129 aa9.78□□□□□ -0.84
TPM4-208ENST00000588410 Q6ZVQ6 151 aa9.77□□□□□ -0.85
TPM4-208ENST00000588410 KRTAP9-8Q9BYQ0 159 aa9.73□□□□□ -0.85
TPM4-208ENST00000588410 TMEM254Q8TBM7 123 aa9.7□□□□□ -0.86
TPM4-208ENST00000588410 SPCS1Q9Y6A9 102 aa9.7□□□□□ -0.86
TPM4-208ENST00000588410 MRPL34Q9BQ48 92 aaKnown RBP9.69□□□□□ -0.86
TPM4-208ENST00000588410 MMP24-AS1A0A0U1RRL7 71 aa9.68□□□□□ -0.86
TPM4-208ENST00000588410 K7EQZ3 153 aa9.67□□□□□ -0.86
TPM4-208ENST00000588410 BPY2O14599 106 aa9.67□□□□□ -0.86
TPM4-208ENST00000588410 hDV103S1A0JD37 113 aa9.66□□□□□ -0.86
TPM4-208ENST00000588410 NDUFS5O43920 106 aa9.65□□□□□ -0.86
TPM4-208ENST00000588410 WFDC13Q8IUB5 93 aa9.65□□□□□ -0.86
TPM4-208ENST00000588410 MT2AP02795 61 aa9.61□□□□□ -0.87
TPM4-208ENST00000588410 COL5A1-AS1Q5SY13 56 aa9.61□□□□□ -0.87
TPM4-208ENST00000588410 SMCPP49901 116 aaPredicted RBP9.57□□□□□ -0.88
TPM4-208ENST00000588410 KRTAP10-10P60014 251 aa9.55□□□□□ -0.88
TPM4-208ENST00000588410 Q8N9L7 120 aa9.54□□□□□ -0.88
TPM4-208ENST00000588410 MT1FP04733 61 aa9.53□□□□□ -0.88
TPM4-208ENST00000588410 K7EP34 96 aa9.52□□□□□ -0.89
TPM4-208ENST00000588410 CASC2Q6XLA1 102 aa9.52□□□□□ -0.89
TPM4-208ENST00000588410 UBL5Q9BZL1 73 aa9.51□□□□□ -0.89
TPM4-208ENST00000588410 IGKV2D-30A0A075B6S6 120 aa9.49□□□□□ -0.89
TPM4-208ENST00000588410 IGKV2-30P06310 120 aa9.49□□□□□ -0.89
TPM4-208ENST00000588410 PRO0461Q9UI25 63 aa9.49□□□□□ -0.89
TPM4-208ENST00000588410 HCG22E2RYF7 251 aa9.47□□□□□ -0.89
TPM4-208ENST00000588410 LINC00846Q9NV44 126 aa9.47□□□□□ -0.89
TPM4-208ENST00000588410 USH2AO75445 5202 aa9.47□□□□□ -0.89
TPM4-208ENST00000588410 Q5W150 140 aa9.46□□□□□ -0.9
TPM4-208ENST00000588410 C7orf65Q6ZTY9 151 aa9.46□□□□□ -0.9
TPM4-208ENST00000588410 H1FX-AS1Q4G0G2 97 aa9.44□□□□□ -0.9
TPM4-208ENST00000588410 GTF2H5Q6ZYL4 71 aa9.43□□□□□ -0.9
TPM4-208ENST00000588410 KRTAP9-3Q9BYQ3 159 aa9.43□□□□□ -0.9
TPM4-208ENST00000588410 KRTAP9-7A8MTY7 169 aa9.42□□□□□ -0.9
TPM4-208ENST00000588410 CXCL6P80162 114 aa9.42□□□□□ -0.9
TPM4-208ENST00000588410 SSPOA2VEC9 5147 aa9.38□□□□□ -0.91
TPM4-208ENST00000588410 PCP4L1A6NKN8 68 aa9.37□□□□□ -0.91
TPM4-208ENST00000588410 LCE2BO14633 110 aa9.37□□□□□ -0.91
TPM4-208ENST00000588410 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.36□□□□□ -0.91
TPM4-208ENST00000588410 F8W1H4 67 aa9.35□□□□□ -0.91
TPM4-208ENST00000588410 C4orf26Q17RF5 130 aa9.3□□□□□ -0.92
TPM4-208ENST00000588410 ETDBQ3ZM63 59 aa9.3□□□□□ -0.92
TPM4-208ENST00000588410 KRTAP19-1Q8IUB9 90 aa9.24□□□□□ -0.93
TPM4-208ENST00000588410 TP53AIP1Q9HCN2 124 aa9.24□□□□□ -0.93
TPM4-208ENST00000588410 FCGBPQ9Y6R7 5405 aaPredicted RBP9.17□□□□□ -0.94
TPM4-208ENST00000588410 C1orf64Q8NEQ6 169 aa9.15□□□□□ -0.94
TPM4-208ENST00000588410 ACYP1P07311 99 aa9.13□□□□□ -0.95
TPM4-208ENST00000588410 C5orf47Q569G3 176 aa9.13□□□□□ -0.95
TPM4-208ENST00000588410 S4R3F8 94 aa9.12□□□□□ -0.95
TPM4-208ENST00000588410 KRTAP3-1Q9BYR8 98 aa9.11□□□□□ -0.95
TPM4-208ENST00000588410 KRTAP19-6Q3LI70 58 aa9.06□□□□□ -0.96
TPM4-208ENST00000588410 CSAG1Q6PB30 78 aa9.06□□□□□ -0.96
TPM4-208ENST00000588410 FAM236AA0A1B0GUQ0 79 aa9.05□□□□□ -0.96
TPM4-208ENST00000588410 FAM236BA0A1B0GV22 79 aa9.05□□□□□ -0.96
TPM4-208ENST00000588410 FAM240AA0A1B0GVK7 77 aa9.05□□□□□ -0.96
TPM4-208ENST00000588410 ATP5EP2Q5VTU8 51 aa9.05□□□□□ -0.96
TPM4-208ENST00000588410 HIST1H4AP62805 103 aaKnown RBP9.03□□□□□ -0.96
TPM4-208ENST00000588410 CYP4F30PQ9H0H9 118 aa9.03□□□□□ -0.96
TPM4-208ENST00000588410 TRAV22A0A0B4J277 110 aa9.02□□□□□ -0.97
TPM4-208ENST00000588410 LCA10Q71F78 164 aa9.02□□□□□ -0.97
TPM4-208ENST00000588410 LOC101927531A0A1B0GV80 90 aa9□□□□□ -0.97
TPM4-208ENST00000588410 UQCRQO14949 82 aa8.94□□□□□ -0.98
TPM4-208ENST00000588410 MACF1Q9UPN3 7388 aaKnown RBP8.92□□□□□ -0.98
TPM4-208ENST00000588410 ATOX1O00244 68 aa8.91□□□□□ -0.98
TPM4-208ENST00000588410 H0Y9P7 68 aa8.9□□□□□ -0.98
TPM4-208ENST00000588410 LINC00643Q86TS7 51 aa8.9□□□□□ -0.98
TPM4-208ENST00000588410 A0A087WVE0 104 aa8.86□□□□□ -0.99
TPM4-208ENST00000588410 KRTAP3-3Q9BYR6 98 aa8.85□□□□□ -0.99
TPM4-208ENST00000588410 SYNE2Q8WXH0 6885 aaKnown RBP8.82□□□□□ -1
TPM4-208ENST00000588410 KLKP1Q107X0 134 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms