RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 LINC00472Q9H8W2 130 aa6.12□□□□□ -1.43
CHMP1B-202ENST00000588284 SCGB1A1P11684 91 aa6.11□□□□□ -1.43
CHMP1B-202ENST00000588284 HIST1H4AP62805 103 aaKnown RBP6.11□□□□□ -1.43
CHMP1B-202ENST00000588284 RPS29P62273 56 aaKnown RBP6.1□□□□□ -1.43
CHMP1B-202ENST00000588284 LINC00304Q8N9R0 145 aa6.1□□□□□ -1.43
CHMP1B-202ENST00000588284 HSPG2P98160 4391 aa6.1□□□□□ -1.43
CHMP1B-202ENST00000588284 NDUFB1O75438 58 aa6.09□□□□□ -1.43
CHMP1B-202ENST00000588284 KRTAP4-9Q9BYQ8 210 aa6.09□□□□□ -1.43
CHMP1B-202ENST00000588284 VPS13BQ7Z7G8 4022 aa6.09□□□□□ -1.44
CHMP1B-202ENST00000588284 IGKV4-1P06312 121 aa6.07□□□□□ -1.44
CHMP1B-202ENST00000588284 DSCR10P59022 87 aa6.07□□□□□ -1.44
CHMP1B-202ENST00000588284 FAT1Q14517 4588 aa6.06□□□□□ -1.44
CHMP1B-202ENST00000588284 KRTAP10-8P60410 259 aa6.06□□□□□ -1.44
CHMP1B-202ENST00000588284 DEFB116Q30KQ4 102 aa6.06□□□□□ -1.44
CHMP1B-202ENST00000588284 DMBT1Q9UGM3 2413 aaPredicted RBP6.06□□□□□ -1.44
CHMP1B-202ENST00000588284 A8MWP4 228 aa6.05□□□□□ -1.44
CHMP1B-202ENST00000588284 Q96NJ1 140 aa6.05□□□□□ -1.44
CHMP1B-202ENST00000588284 OXTP01178 125 aa6.03□□□□□ -1.44
CHMP1B-202ENST00000588284 LCE4AQ5TA78 99 aa6.03□□□□□ -1.44
CHMP1B-202ENST00000588284 PRR15Q8IV56 129 aa6.03□□□□□ -1.44
CHMP1B-202ENST00000588284 A0A087WVE0 104 aa6.02□□□□□ -1.45
CHMP1B-202ENST00000588284 K7EQZ3 153 aa6.02□□□□□ -1.45
CHMP1B-202ENST00000588284 C1orf195Q5TG92 126 aa6.02□□□□□ -1.45
CHMP1B-202ENST00000588284 Q8N9L7 120 aa6.02□□□□□ -1.45
CHMP1B-202ENST00000588284 FAM236AA0A1B0GUQ0 79 aa6.01□□□□□ -1.45
CHMP1B-202ENST00000588284 FAM236BA0A1B0GV22 79 aa6.01□□□□□ -1.45
CHMP1B-202ENST00000588284 KRTAP4-2Q9BYR5 136 aa6.01□□□□□ -1.45
CHMP1B-202ENST00000588284 A0A1B0GVX0 72 aa5.99□□□□□ -1.45
CHMP1B-202ENST00000588284 ATOX1O00244 68 aa5.99□□□□□ -1.45
CHMP1B-202ENST00000588284 HCG22E2RYF7 251 aa5.98□□□□□ -1.45
CHMP1B-202ENST00000588284 SMIM20Q8N5G0 67 aa5.98□□□□□ -1.45
CHMP1B-202ENST00000588284 KRTAP9-7A8MTY7 169 aa5.97□□□□□ -1.45
CHMP1B-202ENST00000588284 C8orf87E5RJ46 101 aa5.97□□□□□ -1.45
CHMP1B-202ENST00000588284 IGHV6-1A0A0B4J1U7 121 aa5.96□□□□□ -1.46
CHMP1B-202ENST00000588284 C8orf17Q9NRJ1 99 aa5.96□□□□□ -1.46
CHMP1B-202ENST00000588284 PKHD1L1Q86WI1 4243 aa5.96□□□□□ -1.46
CHMP1B-202ENST00000588284 CASC2Q6XLA1 102 aa5.95□□□□□ -1.46
CHMP1B-202ENST00000588284 KRTAP29-1A8MX34 341 aaPredicted RBP5.94□□□□□ -1.46
CHMP1B-202ENST00000588284 ANAPC13Q9BS18 74 aa5.94□□□□□ -1.46
CHMP1B-202ENST00000588284 KRTAP3-1Q9BYR8 98 aa5.94□□□□□ -1.46
CHMP1B-202ENST00000588284 hDV103S1A0JD37 113 aa5.93□□□□□ -1.46
CHMP1B-202ENST00000588284 LINC00313P59037 77 aa5.93□□□□□ -1.46
CHMP1B-202ENST00000588284 WFDC13Q8IUB5 93 aa5.93□□□□□ -1.46
CHMP1B-202ENST00000588284 MMP24-AS1A0A0U1RRL7 71 aa5.92□□□□□ -1.46
CHMP1B-202ENST00000588284 MT1HL1P0DM35 61 aa5.92□□□□□ -1.46
CHMP1B-202ENST00000588284 SVIPQ8NHG7 77 aa5.92□□□□□ -1.46
CHMP1B-202ENST00000588284 TRAV7A0A075B6U4 112 aa5.91□□□□□ -1.46
CHMP1B-202ENST00000588284 PCP4P48539 62 aa5.91□□□□□ -1.46
CHMP1B-202ENST00000588284 TMEM254Q8TBM7 123 aa5.91□□□□□ -1.46
CHMP1B-202ENST00000588284 FP248Q71RG6 208 aaPredicted RBP5.9□□□□□ -1.46
CHMP1B-202ENST00000588284 SERP2Q8N6R1 65 aa5.9□□□□□ -1.46
CHMP1B-202ENST00000588284 MRPL34Q9BQ48 92 aaKnown RBP5.9□□□□□ -1.46
CHMP1B-202ENST00000588284 UBR4Q5T4S7 5183 aa5.88□□□□□ -1.47
CHMP1B-202ENST00000588284 TP53AIP1Q9HCN2 124 aa5.88□□□□□ -1.47
CHMP1B-202ENST00000588284 FLG2Q5D862 2391 aaPredicted RBP5.88□□□□□ -1.47
CHMP1B-202ENST00000588284 KRTAP23-1A1A580 65 aa5.87□□□□□ -1.47
CHMP1B-202ENST00000588284 COX7CP15954 63 aa5.87□□□□□ -1.47
CHMP1B-202ENST00000588284 NOTCH2NLQ7Z3S9 236 aa5.87□□□□□ -1.47
CHMP1B-202ENST00000588284 OCR1Q9BZK8 76 aa5.87□□□□□ -1.47
CHMP1B-202ENST00000588284 UQCRQO14949 82 aa5.86□□□□□ -1.47
CHMP1B-202ENST00000588284 MYCBP2O75592 4640 aa5.85□□□□□ -1.47
CHMP1B-202ENST00000588284 RETNLBQ9BQ08 111 aa5.85□□□□□ -1.47
CHMP1B-202ENST00000588284 KRTAP4-11Q9BYQ6 195 aa5.85□□□□□ -1.47
CHMP1B-202ENST00000588284 NDUFS5O43920 106 aa5.84□□□□□ -1.47
CHMP1B-202ENST00000588284 C5orf47Q569G3 176 aa5.84□□□□□ -1.47
CHMP1B-202ENST00000588284 IGLV7-46A0A075B6I9 117 aa5.82□□□□□ -1.48
CHMP1B-202ENST00000588284 Q8N9P0 234 aaPredicted RBP5.82□□□□□ -1.48
CHMP1B-202ENST00000588284 FAT3Q8TDW7 4589 aa5.81□□□□□ -1.48
CHMP1B-202ENST00000588284 KRTAP16-1A8MUX0 517 aa5.8□□□□□ -1.48
CHMP1B-202ENST00000588284 MP68P56378 58 aa5.8□□□□□ -1.48
CHMP1B-202ENST00000588284 LRP1Q07954 4544 aaKnown RBP5.8□□□□□ -1.48
CHMP1B-202ENST00000588284 H3BPC8 53 aa5.79□□□□□ -1.48
CHMP1B-202ENST00000588284 C9orf92A6NGG3 77 aa5.78□□□□□ -1.48
CHMP1B-202ENST00000588284 PRR4Q16378 134 aa5.78□□□□□ -1.48
CHMP1B-202ENST00000588284 CCDC179H3BU77 68 aa5.77□□□□□ -1.49
CHMP1B-202ENST00000588284 C20orf197Q8N268 126 aa5.77□□□□□ -1.49
CHMP1B-202ENST00000588284 TNXBP22105 4242 aa5.77□□□□□ -1.49
CHMP1B-202ENST00000588284 TRAV22A0A0B4J277 110 aa5.76□□□□□ -1.49
CHMP1B-202ENST00000588284 H0Y9P7 68 aa5.76□□□□□ -1.49
CHMP1B-202ENST00000588284 KRTAP9-3Q9BYQ3 159 aa5.76□□□□□ -1.49
CHMP1B-202ENST00000588284 A8MUU9 505 aa5.75□□□□□ -1.49
CHMP1B-202ENST00000588284 C20orf166-AS1Q96NR2 134 aa5.75□□□□□ -1.49
CHMP1B-202ENST00000588284 KLKP1Q107X0 134 aa5.74□□□□□ -1.49
CHMP1B-202ENST00000588284 A0A0U1RQV1 116 aa5.73□□□□□ -1.49
CHMP1B-202ENST00000588284 NDUFC1O43677 76 aa5.73□□□□□ -1.49
CHMP1B-202ENST00000588284 KRTAP13-3Q3SY46 172 aa5.73□□□□□ -1.49
CHMP1B-202ENST00000588284 LINC00208Q96KT6 92 aa5.73□□□□□ -1.49
CHMP1B-202ENST00000588284 Q75L30 129 aa5.72□□□□□ -1.49
CHMP1B-202ENST00000588284 TPRXLQ17RH7 258 aa5.71□□□□□ -1.5
CHMP1B-202ENST00000588284 C1orf64Q8NEQ6 169 aa5.71□□□□□ -1.5
CHMP1B-202ENST00000588284 Q5W150 140 aa5.7□□□□□ -1.5
CHMP1B-202ENST00000588284 ZCCHC13Q8WW36 166 aaKnown RBP5.7□□□□□ -1.5
CHMP1B-202ENST00000588284 SNURFQ9Y675 71 aa5.7□□□□□ -1.5
CHMP1B-202ENST00000588284 LOC101927531A0A1B0GV80 90 aa5.69□□□□□ -1.5
CHMP1B-202ENST00000588284 LCE5AQ5TCM9 118 aa5.68□□□□□ -1.5
CHMP1B-202ENST00000588284 ATP11AUNQ6ZP68 121 aa5.68□□□□□ -1.5
CHMP1B-202ENST00000588284 HMCN2Q8NDA2 5059 aa5.68□□□□□ -1.5
CHMP1B-202ENST00000588284 RPL37P61927 97 aaKnown RBP5.66□□□□□ -1.5
CHMP1B-202ENST00000588284 IGKV2-30P06310 120 aa5.64□□□□□ -1.51
CHMP1B-202ENST00000588284 H7BZZ5 65 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms