RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 A0A1B0GVX0 72 aa8.21□□□□□ -1.1
LINC01842-201ENST00000588275 C8orf87E5RJ46 101 aa8.21□□□□□ -1.1
LINC01842-201ENST00000588275 K7ERJ3 54 aa8.2□□□□□ -1.1
LINC01842-201ENST00000588275 ZCCHC13Q8WW36 166 aaKnown RBP8.19□□□□□ -1.1
LINC01842-201ENST00000588275 COX6CP09669 75 aa8.18□□□□□ -1.1
LINC01842-201ENST00000588275 SYNE2Q8WXH0 6885 aaKnown RBP8.18□□□□□ -1.1
LINC01842-201ENST00000588275 SPINK7P58062 85 aa8.17□□□□□ -1.1
LINC01842-201ENST00000588275 LINC00846Q9NV44 126 aa8.17□□□□□ -1.1
LINC01842-201ENST00000588275 MACF1Q9UPN3 7388 aaKnown RBP8.16□□□□□ -1.1
LINC01842-201ENST00000588275 UBE2V1Q13404 147 aa8.15□□□□□ -1.1
LINC01842-201ENST00000588275 HSD52Q0P140 79 aa8.13□□□□□ -1.11
LINC01842-201ENST00000588275 RBM3P98179 157 aaKnown RBP8.12□□□□□ -1.11
LINC01842-201ENST00000588275 DSCR8Q96T75 97 aa8.12□□□□□ -1.11
LINC01842-201ENST00000588275 WFDC13Q8IUB5 93 aa8.11□□□□□ -1.11
LINC01842-201ENST00000588275 A8MWP4 228 aa8.1□□□□□ -1.11
LINC01842-201ENST00000588275 J3KT08 172 aa8.1□□□□□ -1.11
LINC01842-201ENST00000588275 LYRM7Q5U5X0 104 aa8.1□□□□□ -1.11
LINC01842-201ENST00000588275 KRTAP19-6Q3LI70 58 aa8.09□□□□□ -1.11
LINC01842-201ENST00000588275 NDUFB1O75438 58 aa8.07□□□□□ -1.12
LINC01842-201ENST00000588275 SCGB1C2P0DMR2 95 aa8.07□□□□□ -1.12
LINC01842-201ENST00000588275 Q8N9P0 234 aaPredicted RBP8.06□□□□□ -1.12
LINC01842-201ENST00000588275 C9JAW5 83 aa8.05□□□□□ -1.12
LINC01842-201ENST00000588275 C21orf62-AS1Q17RA5 79 aa8.03□□□□□ -1.12
LINC01842-201ENST00000588275 Q6ZQT0 140 aa8.03□□□□□ -1.12
LINC01842-201ENST00000588275 C8orf17Q9NRJ1 99 aa8.03□□□□□ -1.12
LINC01842-201ENST00000588275 BAALC-AS2P0C853 105 aa8.01□□□□□ -1.13
LINC01842-201ENST00000588275 PYY3Q5JQD4 70 aa7.98□□□□□ -1.13
LINC01842-201ENST00000588275 IGKV3D-7A0A0C4DH55 119 aa7.96□□□□□ -1.14
LINC01842-201ENST00000588275 Q6ZVQ6 151 aa7.96□□□□□ -1.14
LINC01842-201ENST00000588275 UQCR10Q9UDW1 63 aa7.95□□□□□ -1.14
LINC01842-201ENST00000588275 JMJD7-PLA2G4BH0Y9G9 81 aa7.9□□□□□ -1.14
LINC01842-201ENST00000588275 H1FX-AS1Q4G0G2 97 aa7.9□□□□□ -1.14
LINC01842-201ENST00000588275 KRTAP6-3Q3LI67 103 aa7.89□□□□□ -1.15
LINC01842-201ENST00000588275 LOC110117498A0A087WWA1 95 aa7.88□□□□□ -1.15
LINC01842-201ENST00000588275 NDUFS5O43920 106 aa7.88□□□□□ -1.15
LINC01842-201ENST00000588275 ATXN8Q156A1 80 aa7.88□□□□□ -1.15
LINC01842-201ENST00000588275 PRR15Q8IV56 129 aa7.88□□□□□ -1.15
LINC01842-201ENST00000588275 MRPL34Q9BQ48 92 aaKnown RBP7.88□□□□□ -1.15
LINC01842-201ENST00000588275 A0A1B0GW54 56 aa7.87□□□□□ -1.15
LINC01842-201ENST00000588275 TMEM254Q8TBM7 123 aa7.87□□□□□ -1.15
LINC01842-201ENST00000588275 C14orf132Q9NPU4 83 aa7.87□□□□□ -1.15
LINC01842-201ENST00000588275 MMP24-AS1A0A0U1RRL7 71 aa7.86□□□□□ -1.15
LINC01842-201ENST00000588275 NAA38Q9BRA0 125 aaKnown RBP7.86□□□□□ -1.15
LINC01842-201ENST00000588275 NREPQ16612 68 aa7.85□□□□□ -1.15
LINC01842-201ENST00000588275 PDE6GP18545 87 aa7.84□□□□□ -1.15
LINC01842-201ENST00000588275 IGKV2D-30A0A075B6S6 120 aa7.83□□□□□ -1.16
LINC01842-201ENST00000588275 IGKV2-30P06310 120 aa7.83□□□□□ -1.16
LINC01842-201ENST00000588275 hDV103S1A0JD37 113 aa7.81□□□□□ -1.16
LINC01842-201ENST00000588275 K7EQZ3 153 aa7.79□□□□□ -1.16
LINC01842-201ENST00000588275 TMA7Q9Y2S6 64 aaKnown RBP7.79□□□□□ -1.16
LINC01842-201ENST00000588275 C7orf65Q6ZTY9 151 aa7.77□□□□□ -1.17
LINC01842-201ENST00000588275 M0R143 59 aa7.74□□□□□ -1.17
LINC01842-201ENST00000588275 Q5W150 140 aa7.73□□□□□ -1.17
LINC01842-201ENST00000588275 FAM236AA0A1B0GUQ0 79 aa7.72□□□□□ -1.17
LINC01842-201ENST00000588275 FAM236BA0A1B0GV22 79 aa7.72□□□□□ -1.17
LINC01842-201ENST00000588275 C4orf26Q17RF5 130 aa7.7□□□□□ -1.18
LINC01842-201ENST00000588275 NEBP20929 6669 aa7.69□□□□□ -1.18
LINC01842-201ENST00000588275 A6NN06 94 aa7.68□□□□□ -1.18
LINC01842-201ENST00000588275 BPY2O14599 106 aa7.68□□□□□ -1.18
LINC01842-201ENST00000588275 C5orf47Q569G3 176 aa7.68□□□□□ -1.18
LINC01842-201ENST00000588275 HCG22E2RYF7 251 aa7.66□□□□□ -1.18
LINC01842-201ENST00000588275 CASC2Q6XLA1 102 aa7.64□□□□□ -1.19
LINC01842-201ENST00000588275 Q8N9L7 120 aa7.64□□□□□ -1.19
LINC01842-201ENST00000588275 MUC12Q9UKN1 5478 aa7.64□□□□□ -1.19
LINC01842-201ENST00000588275 LOC105371267A0A1B0GV96 52 aa7.63□□□□□ -1.19
LINC01842-201ENST00000588275 Q5VV11 94 aa7.61□□□□□ -1.19
LINC01842-201ENST00000588275 MT1BP07438 61 aa7.6□□□□□ -1.19
LINC01842-201ENST00000588275 BATFQ16520 125 aa7.59□□□□□ -1.19
LINC01842-201ENST00000588275 S4R3F8 94 aa7.59□□□□□ -1.19
LINC01842-201ENST00000588275 TSTD3H0UI37 97 aa7.58□□□□□ -1.2
LINC01842-201ENST00000588275 H3BT86 120 aa7.58□□□□□ -1.2
LINC01842-201ENST00000588275 CXCL6P80162 114 aa7.57□□□□□ -1.2
LINC01842-201ENST00000588275 CSAG1Q6PB30 78 aa7.54□□□□□ -1.2
LINC01842-201ENST00000588275 KRTAP3-1Q9BYR8 98 aa7.53□□□□□ -1.2
LINC01842-201ENST00000588275 KRTAP19-8Q3LI54 63 aa7.52□□□□□ -1.21
LINC01842-201ENST00000588275 LCA10Q71F78 164 aa7.52□□□□□ -1.21
LINC01842-201ENST00000588275 SPRR2GQ9BYE4 73 aa7.52□□□□□ -1.21
LINC01842-201ENST00000588275 C1orf64Q8NEQ6 169 aa7.51□□□□□ -1.21
LINC01842-201ENST00000588275 KRTAP10-5P60370 271 aa7.49□□□□□ -1.21
LINC01842-201ENST00000588275 KRTAP20-1Q3LI63 56 aa7.49□□□□□ -1.21
LINC01842-201ENST00000588275 A0A1W2PPM0 123 aa7.47□□□□□ -1.21
LINC01842-201ENST00000588275 C9orf118A6NHY6 69 aa7.47□□□□□ -1.21
LINC01842-201ENST00000588275 KLKP1Q107X0 134 aa7.44□□□□□ -1.22
LINC01842-201ENST00000588275 SMIM6P0DI80 62 aa7.43□□□□□ -1.22
LINC01842-201ENST00000588275 TAX1BP3O14907 124 aa7.42□□□□□ -1.22
LINC01842-201ENST00000588275 IMUPQ9GZP8 106 aa7.42□□□□□ -1.22
LINC01842-201ENST00000588275 UBL5Q9BZL1 73 aa7.41□□□□□ -1.22
LINC01842-201ENST00000588275 KRTAP5-9P26371 169 aa7.39□□□□□ -1.23
LINC01842-201ENST00000588275 MDN1Q9NU22 5596 aa7.38□□□□□ -1.23
LINC01842-201ENST00000588275 KMT2DO14686 5537 aa7.38□□□□□ -1.23
LINC01842-201ENST00000588275 SPCS1Q9Y6A9 102 aa7.36□□□□□ -1.23
LINC01842-201ENST00000588275 SMCPP49901 116 aaPredicted RBP7.34□□□□□ -1.23
LINC01842-201ENST00000588275 KRTAP3-3Q9BYR6 98 aa7.33□□□□□ -1.24
LINC01842-201ENST00000588275 TP53AIP1Q9HCN2 124 aa7.33□□□□□ -1.24
LINC01842-201ENST00000588275 CRIPTQ9P021 101 aa7.29□□□□□ -1.24
LINC01842-201ENST00000588275 A0A087WVE0 104 aa7.28□□□□□ -1.24
LINC01842-201ENST00000588275 CYP4F30PQ9H0H9 118 aa7.25□□□□□ -1.25
LINC01842-201ENST00000588275 PCP4L1A6NKN8 68 aa7.23□□□□□ -1.25
LINC01842-201ENST00000588275 PRO0461Q9UI25 63 aa7.21□□□□□ -1.26
LINC01842-201ENST00000588275 K7EP34 96 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 791.8 ms