RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 CCKP06307 115 aa4.73□□□□□ -1.65
SDF2-204ENST00000587338 PDE6GP18545 87 aa4.73□□□□□ -1.65
SDF2-204ENST00000587338 LOC110117498A0A087WWA1 95 aa4.72□□□□□ -1.65
SDF2-204ENST00000587338 TRBV7-4A0A0J9YYF1 115 aa4.72□□□□□ -1.65
SDF2-204ENST00000587338 K7ERU9 68 aa4.72□□□□□ -1.65
SDF2-204ENST00000587338 M0R2T5 61 aa4.72□□□□□ -1.65
SDF2-204ENST00000587338 Q6JHZ5 121 aa4.72□□□□□ -1.65
SDF2-204ENST00000587338 IGFL1Q6UW32 110 aa4.72□□□□□ -1.65
SDF2-204ENST00000587338 Q6ZQT0 140 aa4.72□□□□□ -1.65
SDF2-204ENST00000587338 HRCT1Q6UXD1 115 aa4.71□□□□□ -1.66
SDF2-204ENST00000587338 KRTAP4-9Q9BYQ8 210 aa4.71□□□□□ -1.66
SDF2-204ENST00000587338 USH2AO75445 5202 aa4.71□□□□□ -1.66
SDF2-204ENST00000587338 SSPOA2VEC9 5147 aa4.71□□□□□ -1.66
SDF2-204ENST00000587338 IGLV8-61A0A075B6I0 122 aa4.7□□□□□ -1.66
SDF2-204ENST00000587338 PCOTHQ58A44 107 aa4.7□□□□□ -1.66
SDF2-204ENST00000587338 A0A1W2PNM2 257 aa4.69□□□□□ -1.66
SDF2-204ENST00000587338 C21orf62-AS1Q17RA5 79 aa4.69□□□□□ -1.66
SDF2-204ENST00000587338 SSBP3-AS1Q7Z2R9 100 aa4.69□□□□□ -1.66
SDF2-204ENST00000587338 KRTAP4-2Q9BYR5 136 aa4.69□□□□□ -1.66
SDF2-204ENST00000587338 ACYP1P07311 99 aa4.67□□□□□ -1.66
SDF2-204ENST00000587338 RPS29P62273 56 aaKnown RBP4.67□□□□□ -1.66
SDF2-204ENST00000587338 A0A087WSZ3 146 aa4.66□□□□□ -1.66
SDF2-204ENST00000587338 LINC00846Q9NV44 126 aa4.66□□□□□ -1.66
SDF2-204ENST00000587338 FLGP20930 4061 aaPredicted RBP4.65□□□□□ -1.66
SDF2-204ENST00000587338 FAM240AA0A1B0GVK7 77 aa4.65□□□□□ -1.67
SDF2-204ENST00000587338 COX6B2Q6YFQ2 88 aa4.65□□□□□ -1.67
SDF2-204ENST00000587338 UBL5Q9BZL1 73 aa4.65□□□□□ -1.67
SDF2-204ENST00000587338 FCGBPQ9Y6R7 5405 aaPredicted RBP4.65□□□□□ -1.67
SDF2-204ENST00000587338 TRBV7-7A0A0K0K1E9 115 aa4.64□□□□□ -1.67
SDF2-204ENST00000587338 NREPQ16612 68 aa4.64□□□□□ -1.67
SDF2-204ENST00000587338 A0A1B0GW54 56 aa4.63□□□□□ -1.67
SDF2-204ENST00000587338 Q6Q795 121 aa4.63□□□□□ -1.67
SDF2-204ENST00000587338 Q6ZVQ6 151 aa4.63□□□□□ -1.67
SDF2-204ENST00000587338 C9orf92A6NGG3 77 aa4.62□□□□□ -1.67
SDF2-204ENST00000587338 CD164Q04900 197 aa4.62□□□□□ -1.67
SDF2-204ENST00000587338 SYNE2Q8WXH0 6885 aaKnown RBP4.61□□□□□ -1.67
SDF2-204ENST00000587338 DEFB116Q30KQ4 102 aa4.61□□□□□ -1.67
SDF2-204ENST00000587338 SS18L2Q9UHA2 77 aa4.61□□□□□ -1.67
SDF2-204ENST00000587338 IGKV3D-7A0A0C4DH55 119 aa4.6□□□□□ -1.67
SDF2-204ENST00000587338 LIMD2Q9BT23 127 aa4.6□□□□□ -1.67
SDF2-204ENST00000587338 BPY2O14599 106 aa4.59□□□□□ -1.67
SDF2-204ENST00000587338 LINC00643Q86TS7 51 aa4.59□□□□□ -1.67
SDF2-204ENST00000587338 MACF1Q9UPN3 7388 aaKnown RBP4.59□□□□□ -1.67
SDF2-204ENST00000587338 SIGMAR1Q99720 223 aa4.57□□□□□ -1.68
SDF2-204ENST00000587338 IGKV4-1P06312 121 aa4.56□□□□□ -1.68
SDF2-204ENST00000587338 MT-ATP8P03928 68 aa4.55□□□□□ -1.68
SDF2-204ENST00000587338 HIST1H4AP62805 103 aaKnown RBP4.55□□□□□ -1.68
SDF2-204ENST00000587338 J3KT08 172 aa4.54□□□□□ -1.68
SDF2-204ENST00000587338 ATP5EP2Q5VTU8 51 aa4.54□□□□□ -1.68
SDF2-204ENST00000587338 LINC00472Q9H8W2 130 aa4.54□□□□□ -1.68
SDF2-204ENST00000587338 NDUFB1O75438 58 aa4.53□□□□□ -1.68
SDF2-204ENST00000587338 CXCL6P80162 114 aa4.53□□□□□ -1.68
SDF2-204ENST00000587338 Q8N9L7 120 aa4.53□□□□□ -1.68
SDF2-204ENST00000587338 Q96NJ1 140 aa4.53□□□□□ -1.68
SDF2-204ENST00000587338 DSCR10P59022 87 aa4.52□□□□□ -1.69
SDF2-204ENST00000587338 C1orf195Q5TG92 126 aa4.52□□□□□ -1.69
SDF2-204ENST00000587338 Q5XG85 94 aa4.52□□□□□ -1.69
SDF2-204ENST00000587338 A8MWP4 228 aa4.51□□□□□ -1.69
SDF2-204ENST00000587338 K7EQZ3 153 aa4.51□□□□□ -1.69
SDF2-204ENST00000587338 RPL37P61927 97 aaKnown RBP4.51□□□□□ -1.69
SDF2-204ENST00000587338 KRTAP4-11Q9BYQ6 195 aa4.51□□□□□ -1.69
SDF2-204ENST00000587338 IGHV6-1A0A0B4J1U7 121 aa4.5□□□□□ -1.69
SDF2-204ENST00000587338 A0A087WVE0 104 aa4.49□□□□□ -1.69
SDF2-204ENST00000587338 A0A1B0GVX0 72 aa4.48□□□□□ -1.69
SDF2-204ENST00000587338 PRR15Q8IV56 129 aa4.48□□□□□ -1.69
SDF2-204ENST00000587338 IMUPQ9GZP8 106 aa4.48□□□□□ -1.69
SDF2-204ENST00000587338 WFDC13Q8IUB5 93 aa4.47□□□□□ -1.69
SDF2-204ENST00000587338 KRTAP9-8Q9BYQ0 159 aa4.47□□□□□ -1.69
SDF2-204ENST00000587338 HCG22E2RYF7 251 aa4.45□□□□□ -1.7
SDF2-204ENST00000587338 SCGB1A1P11684 91 aa4.45□□□□□ -1.7
SDF2-204ENST00000587338 C8orf17Q9NRJ1 99 aa4.45□□□□□ -1.7
SDF2-204ENST00000587338 FAM236AA0A1B0GUQ0 79 aa4.44□□□□□ -1.7
SDF2-204ENST00000587338 FAM236BA0A1B0GV22 79 aa4.44□□□□□ -1.7
SDF2-204ENST00000587338 C8orf87E5RJ46 101 aa4.44□□□□□ -1.7
SDF2-204ENST00000587338 LINC00313P59037 77 aa4.44□□□□□ -1.7
SDF2-204ENST00000587338 LCE4AQ5TA78 99 aa4.44□□□□□ -1.7
SDF2-204ENST00000587338 CASC2Q6XLA1 102 aa4.44□□□□□ -1.7
SDF2-204ENST00000587338 NOTCH2NLQ7Z3S9 236 aa4.43□□□□□ -1.7
SDF2-204ENST00000587338 MMP24-AS1A0A0U1RRL7 71 aa4.42□□□□□ -1.7
SDF2-204ENST00000587338 hDV103S1A0JD37 113 aa4.42□□□□□ -1.7
SDF2-204ENST00000587338 NDUFS5O43920 106 aa4.42□□□□□ -1.7
SDF2-204ENST00000587338 MT2AP02795 61 aa4.4□□□□□ -1.71
SDF2-204ENST00000587338 MRPL34Q9BQ48 92 aaKnown RBP4.4□□□□□ -1.71
SDF2-204ENST00000587338 ATP11AUNQ6ZP68 121 aa4.39□□□□□ -1.71
SDF2-204ENST00000587338 TMEM254Q8TBM7 123 aa4.39□□□□□ -1.71
SDF2-204ENST00000587338 ATOX1O00244 68 aa4.38□□□□□ -1.71
SDF2-204ENST00000587338 NEBP20929 6669 aa4.37□□□□□ -1.71
SDF2-204ENST00000587338 MT1FP04733 61 aa4.36□□□□□ -1.71
SDF2-204ENST00000587338 KRTAP16-1A8MUX0 517 aa4.35□□□□□ -1.71
SDF2-204ENST00000587338 KRTAP5-3Q6L8H2 238 aa4.35□□□□□ -1.71
SDF2-204ENST00000587338 ANAPC13Q9BS18 74 aa4.35□□□□□ -1.71
SDF2-204ENST00000587338 KRTAP10-10P60014 251 aa4.34□□□□□ -1.71
SDF2-204ENST00000587338 Q75L30 129 aa4.34□□□□□ -1.71
SDF2-204ENST00000587338 SMIM20Q8N5G0 67 aa4.34□□□□□ -1.71
SDF2-204ENST00000587338 KRTAP9-3Q9BYQ3 159 aa4.34□□□□□ -1.71
SDF2-204ENST00000587338 TRAV7A0A075B6U4 112 aa4.33□□□□□ -1.72
SDF2-204ENST00000587338 TP53AIP1Q9HCN2 124 aa4.33□□□□□ -1.72
SDF2-204ENST00000587338 UQCRQO14949 82 aa4.32□□□□□ -1.72
SDF2-204ENST00000587338 Q8N9P0 234 aaPredicted RBP4.32□□□□□ -1.72
SDF2-204ENST00000587338 OCR1Q9BZK8 76 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms