RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 IGKV3D-7A0A0C4DH55 119 aa8.39□□□□□ -1.07
NFIX-208ENST00000587260 A8MWP4 228 aa8.38□□□□□ -1.07
NFIX-208ENST00000587260 MT-ATP8P03928 68 aa8.35□□□□□ -1.07
NFIX-208ENST00000587260 HMCN2Q8NDA2 5059 aa8.35□□□□□ -1.07
NFIX-208ENST00000587260 PRR15Q8IV56 129 aa8.34□□□□□ -1.07
NFIX-208ENST00000587260 NDUFB1O75438 58 aa8.34□□□□□ -1.08
NFIX-208ENST00000587260 FP248Q71RG6 208 aaPredicted RBP8.34□□□□□ -1.08
NFIX-208ENST00000587260 IMUPQ9GZP8 106 aa8.34□□□□□ -1.08
NFIX-208ENST00000587260 K7EQZ3 153 aa8.33□□□□□ -1.08
NFIX-208ENST00000587260 IGLV7-46A0A075B6I9 117 aa8.32□□□□□ -1.08
NFIX-208ENST00000587260 A0A1B0GVX0 72 aa8.32□□□□□ -1.08
NFIX-208ENST00000587260 Q8N9L7 120 aa8.31□□□□□ -1.08
NFIX-208ENST00000587260 HIST1H4AP62805 103 aaKnown RBP8.28□□□□□ -1.08
NFIX-208ENST00000587260 IGHV6-1A0A0B4J1U7 121 aa8.27□□□□□ -1.09
NFIX-208ENST00000587260 C8orf87E5RJ46 101 aa8.26□□□□□ -1.09
NFIX-208ENST00000587260 C9orf92A6NGG3 77 aa8.24□□□□□ -1.09
NFIX-208ENST00000587260 C8orf17Q9NRJ1 99 aa8.24□□□□□ -1.09
NFIX-208ENST00000587260 A0A087WVE0 104 aa8.24□□□□□ -1.09
NFIX-208ENST00000587260 MMP24-AS1A0A0U1RRL7 71 aa8.24□□□□□ -1.09
NFIX-208ENST00000587260 LPAP08519 4548 aa8.23□□□□□ -1.09
NFIX-208ENST00000587260 LINC00313P59037 77 aa8.23□□□□□ -1.09
NFIX-208ENST00000587260 KRTAP13-3Q3SY46 172 aa8.23□□□□□ -1.09
NFIX-208ENST00000587260 NOTCH2NLQ7Z3S9 236 aa8.23□□□□□ -1.09
NFIX-208ENST00000587260 HCG22E2RYF7 251 aa8.21□□□□□ -1.1
NFIX-208ENST00000587260 TPRXLQ17RH7 258 aa8.21□□□□□ -1.1
NFIX-208ENST00000587260 hDV103S1A0JD37 113 aa8.19□□□□□ -1.1
NFIX-208ENST00000587260 LCE2CQ5TA81 110 aa8.19□□□□□ -1.1
NFIX-208ENST00000587260 UBR4Q5T4S7 5183 aa8.18□□□□□ -1.1
NFIX-208ENST00000587260 KRTAP16-1A8MUX0 517 aa8.18□□□□□ -1.1
NFIX-208ENST00000587260 CASC2Q6XLA1 102 aa8.18□□□□□ -1.1
NFIX-208ENST00000587260 TMEM254Q8TBM7 123 aa8.17□□□□□ -1.1
NFIX-208ENST00000587260 WFDC13Q8IUB5 93 aa8.16□□□□□ -1.1
NFIX-208ENST00000587260 MRPL34Q9BQ48 92 aaKnown RBP8.14□□□□□ -1.11
NFIX-208ENST00000587260 LRP2P98164 4655 aa8.13□□□□□ -1.11
NFIX-208ENST00000587260 XP32Q5T750 250 aa8.13□□□□□ -1.11
NFIX-208ENST00000587260 Q8N9P0 234 aaPredicted RBP8.13□□□□□ -1.11
NFIX-208ENST00000587260 FAM236AA0A1B0GUQ0 79 aa8.12□□□□□ -1.11
NFIX-208ENST00000587260 FAM236BA0A1B0GV22 79 aa8.12□□□□□ -1.11
NFIX-208ENST00000587260 SCGB1A1P11684 91 aa8.1□□□□□ -1.11
NFIX-208ENST00000587260 C20orf166-AS1Q96NR2 134 aa8.09□□□□□ -1.11
NFIX-208ENST00000587260 A8MUU9 505 aa8.08□□□□□ -1.12
NFIX-208ENST00000587260 ATOX1O00244 68 aa8.05□□□□□ -1.12
NFIX-208ENST00000587260 Q75L30 129 aa8.05□□□□□ -1.12
NFIX-208ENST00000587260 OCR1Q9BZK8 76 aa8.04□□□□□ -1.12
NFIX-208ENST00000587260 TP53AIP1Q9HCN2 124 aa8.04□□□□□ -1.12
NFIX-208ENST00000587260 SMIM20Q8N5G0 67 aa8.03□□□□□ -1.12
NFIX-208ENST00000587260 NDUFS5O43920 106 aa8.02□□□□□ -1.13
NFIX-208ENST00000587260 LCE2AQ5TA79 106 aaPredicted RBP8.02□□□□□ -1.13
NFIX-208ENST00000587260 RPL37P61927 97 aaKnown RBP8.01□□□□□ -1.13
NFIX-208ENST00000587260 UQCRQO14949 82 aa7.99□□□□□ -1.13
NFIX-208ENST00000587260 TRAV7A0A075B6U4 112 aa7.98□□□□□ -1.13
NFIX-208ENST00000587260 RNF213Q63HN8 5207 aa7.96□□□□□ -1.14
NFIX-208ENST00000587260 PCOTHQ58A44 107 aa7.95□□□□□ -1.14
NFIX-208ENST00000587260 ZCCHC13Q8WW36 166 aaKnown RBP7.95□□□□□ -1.14
NFIX-208ENST00000587260 SEC61BP60468 96 aaKnown RBP7.94□□□□□ -1.14
NFIX-208ENST00000587260 Q5W150 140 aa7.94□□□□□ -1.14
NFIX-208ENST00000587260 SERP2Q8N6R1 65 aa7.94□□□□□ -1.14
NFIX-208ENST00000587260 C5orf47Q569G3 176 aa7.93□□□□□ -1.14
NFIX-208ENST00000587260 ATP11AUNQ6ZP68 121 aa7.93□□□□□ -1.14
NFIX-208ENST00000587260 MUC17Q685J3 4493 aa7.92□□□□□ -1.14
NFIX-208ENST00000587260 TRAV22A0A0B4J277 110 aa7.92□□□□□ -1.14
NFIX-208ENST00000587260 LORP23490 312 aaPredicted RBP7.9□□□□□ -1.14
NFIX-208ENST00000587260 ANAPC13Q9BS18 74 aa7.9□□□□□ -1.14
NFIX-208ENST00000587260 COX7CP15954 63 aa7.88□□□□□ -1.15
NFIX-208ENST00000587260 H0Y9P7 68 aa7.87□□□□□ -1.15
NFIX-208ENST00000587260 MP68P56378 58 aa7.87□□□□□ -1.15
NFIX-208ENST00000587260 H3BPC8 53 aa7.86□□□□□ -1.15
NFIX-208ENST00000587260 KRTAP4-1Q9BYQ7 146 aa7.83□□□□□ -1.16
NFIX-208ENST00000587260 LOC101927531A0A1B0GV80 90 aa7.81□□□□□ -1.16
NFIX-208ENST00000587260 C1orf64Q8NEQ6 169 aa7.81□□□□□ -1.16
NFIX-208ENST00000587260 LINC00208Q96KT6 92 aa7.81□□□□□ -1.16
NFIX-208ENST00000587260 A0A0U1RQV1 116 aa7.8□□□□□ -1.16
NFIX-208ENST00000587260 IGKV2-30P06310 120 aa7.8□□□□□ -1.16
NFIX-208ENST00000587260 C20orf197Q8N268 126 aa7.78□□□□□ -1.16
NFIX-208ENST00000587260 CYP4F30PQ9H0H9 118 aa7.78□□□□□ -1.16
NFIX-208ENST00000587260 MUC2Q02817 5179 aa7.77□□□□□ -1.16
NFIX-208ENST00000587260 SPINK7P58062 85 aa7.77□□□□□ -1.17
NFIX-208ENST00000587260 KLKP1Q107X0 134 aa7.77□□□□□ -1.17
NFIX-208ENST00000587260 C7orf65Q6ZTY9 151 aa7.77□□□□□ -1.17
NFIX-208ENST00000587260 IGKV2D-30A0A075B6S6 120 aa7.75□□□□□ -1.17
NFIX-208ENST00000587260 CCDC179H3BU77 68 aa7.73□□□□□ -1.17
NFIX-208ENST00000587260 SNURFQ9Y675 71 aa7.73□□□□□ -1.17
NFIX-208ENST00000587260 PCP4P48539 62 aa7.72□□□□□ -1.17
NFIX-208ENST00000587260 NDUFC1O43677 76 aa7.67□□□□□ -1.18
NFIX-208ENST00000587260 HRES1P13985 223 aa7.65□□□□□ -1.18
NFIX-208ENST00000587260 CYSTM1Q9H1C7 97 aa7.65□□□□□ -1.18
NFIX-208ENST00000587260 H7BZZ5 65 aa7.62□□□□□ -1.19
NFIX-208ENST00000587260 MPLKIPQ8TAP9 179 aa7.62□□□□□ -1.19
NFIX-208ENST00000587260 SPANXA2-OT1Q8N9U9 137 aa7.58□□□□□ -1.2
NFIX-208ENST00000587260 C4orf26Q17RF5 130 aa7.57□□□□□ -1.2
NFIX-208ENST00000587260 KRTAP19-2Q3LHN2 52 aa7.55□□□□□ -1.2
NFIX-208ENST00000587260 COX6B2Q6YFQ2 88 aa7.55□□□□□ -1.2
NFIX-208ENST00000587260 RBM12B-AS1Q9P1G2 102 aa7.55□□□□□ -1.2
NFIX-208ENST00000587260 FAM236DA0A1B0GTK5 79 aa7.53□□□□□ -1.2
NFIX-208ENST00000587260 FAM236CP0DP71 79 aa7.53□□□□□ -1.2
NFIX-208ENST00000587260 H3BS24 57 aa7.52□□□□□ -1.2
NFIX-208ENST00000587260 FAT4Q6V0I7 4981 aa7.52□□□□□ -1.21
NFIX-208ENST00000587260 KRTAP3-1Q9BYR8 98 aa7.51□□□□□ -1.21
NFIX-208ENST00000587260 A8MUN3 132 aa7.49□□□□□ -1.21
NFIX-208ENST00000587260 DMAC1Q96GE9 116 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms