RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 FLGP20930 4061 aaPredicted RBP6.24□□□□□ -1.41
LIG3-207ENST00000586119 BAALC-AS2P0C853 105 aa6.23□□□□□ -1.41
LIG3-207ENST00000586119 LIMD2Q9BT23 127 aa6.21□□□□□ -1.42
LIG3-207ENST00000586119 IGFL1Q6UW32 110 aa6.2□□□□□ -1.42
LIG3-207ENST00000586119 LINC00643Q86TS7 51 aa6.2□□□□□ -1.42
LIG3-207ENST00000586119 M0R2T5 61 aa6.19□□□□□ -1.42
LIG3-207ENST00000586119 JMJD7-PLA2G4BH0Y9G9 81 aa6.18□□□□□ -1.42
LIG3-207ENST00000586119 C1orf195Q5TG92 126 aa6.18□□□□□ -1.42
LIG3-207ENST00000586119 Q5XG85 94 aa6.18□□□□□ -1.42
LIG3-207ENST00000586119 RBM3P98179 157 aaKnown RBP6.17□□□□□ -1.42
LIG3-207ENST00000586119 RPL37P61927 97 aaKnown RBP6.16□□□□□ -1.42
LIG3-207ENST00000586119 TRBV7-4A0A0J9YYF1 115 aa6.15□□□□□ -1.42
LIG3-207ENST00000586119 DSCR8Q96T75 97 aa6.15□□□□□ -1.42
LIG3-207ENST00000586119 PDE6GP18545 87 aa6.14□□□□□ -1.43
LIG3-207ENST00000586119 COX6B2Q6YFQ2 88 aa6.13□□□□□ -1.43
LIG3-207ENST00000586119 OBSCN-AS1Q96MR7 158 aa6.13□□□□□ -1.43
LIG3-207ENST00000586119 LOC110117498A0A087WWA1 95 aa6.12□□□□□ -1.43
LIG3-207ENST00000586119 SS18L2Q9UHA2 77 aa6.12□□□□□ -1.43
LIG3-207ENST00000586119 A0A1W2PNM2 257 aa6.11□□□□□ -1.43
LIG3-207ENST00000586119 A0A1B0GW54 56 aa6.1□□□□□ -1.43
LIG3-207ENST00000586119 CCKP06307 115 aa6.1□□□□□ -1.43
LIG3-207ENST00000586119 ATOX1O00244 68 aa6.09□□□□□ -1.43
LIG3-207ENST00000586119 ATP5EP2Q5VTU8 51 aa6.09□□□□□ -1.43
LIG3-207ENST00000586119 USH2AO75445 5202 aa6.08□□□□□ -1.44
LIG3-207ENST00000586119 UQCRQO14949 82 aa6.08□□□□□ -1.44
LIG3-207ENST00000586119 Q6ZQT0 140 aa6.08□□□□□ -1.44
LIG3-207ENST00000586119 SVIPQ8NHG7 77 aa6.08□□□□□ -1.44
LIG3-207ENST00000586119 A0A087WSZ3 146 aa6.07□□□□□ -1.44
LIG3-207ENST00000586119 FAM236AA0A1B0GUQ0 79 aa6.07□□□□□ -1.44
LIG3-207ENST00000586119 FAM236BA0A1B0GV22 79 aa6.07□□□□□ -1.44
LIG3-207ENST00000586119 CCDC179H3BU77 68 aa6.07□□□□□ -1.44
LIG3-207ENST00000586119 SSPOA2VEC9 5147 aa6.06□□□□□ -1.44
LIG3-207ENST00000586119 HIST1H4AP62805 103 aaKnown RBP6.06□□□□□ -1.44
LIG3-207ENST00000586119 C14orf132Q9NPU4 83 aa6.06□□□□□ -1.44
LIG3-207ENST00000586119 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.02□□□□□ -1.45
LIG3-207ENST00000586119 COX7CP15954 63 aa6.02□□□□□ -1.45
LIG3-207ENST00000586119 KRTAP9-7A8MTY7 169 aa6.01□□□□□ -1.45
LIG3-207ENST00000586119 KRTAP9-8Q9BYQ0 159 aa6□□□□□ -1.45
LIG3-207ENST00000586119 Q96NJ1 140 aa5.99□□□□□ -1.45
LIG3-207ENST00000586119 LINC00472Q9H8W2 130 aa5.99□□□□□ -1.45
LIG3-207ENST00000586119 LINC00846Q9NV44 126 aa5.99□□□□□ -1.45
LIG3-207ENST00000586119 J3KT08 172 aa5.98□□□□□ -1.45
LIG3-207ENST00000586119 ATP11AUNQ6ZP68 121 aa5.97□□□□□ -1.45
LIG3-207ENST00000586119 Q75L30 129 aa5.97□□□□□ -1.45
LIG3-207ENST00000586119 SERP2Q8N6R1 65 aa5.97□□□□□ -1.45
LIG3-207ENST00000586119 UBL5Q9BZL1 73 aa5.97□□□□□ -1.45
LIG3-207ENST00000586119 IGKV4-1P06312 121 aa5.95□□□□□ -1.46
LIG3-207ENST00000586119 TMEM258P61165 79 aa5.95□□□□□ -1.46
LIG3-207ENST00000586119 RPS28P62857 69 aaKnown RBP5.95□□□□□ -1.46
LIG3-207ENST00000586119 NREPQ16612 68 aa5.95□□□□□ -1.46
LIG3-207ENST00000586119 FCGBPQ9Y6R7 5405 aaPredicted RBP5.94□□□□□ -1.46
LIG3-207ENST00000586119 SMIM20Q8N5G0 67 aa5.94□□□□□ -1.46
LIG3-207ENST00000586119 IGKV3D-7A0A0C4DH55 119 aa5.92□□□□□ -1.46
LIG3-207ENST00000586119 CXCL6P80162 114 aa5.91□□□□□ -1.46
LIG3-207ENST00000586119 NDUFB1O75438 58 aa5.9□□□□□ -1.46
LIG3-207ENST00000586119 DEFB116Q30KQ4 102 aa5.9□□□□□ -1.46
LIG3-207ENST00000586119 Q6ZVQ6 151 aa5.9□□□□□ -1.46
LIG3-207ENST00000586119 A0A1B0GVX0 72 aa5.88□□□□□ -1.47
LIG3-207ENST00000586119 KRTAP16-1A8MUX0 517 aa5.88□□□□□ -1.47
LIG3-207ENST00000586119 A8MWP4 228 aa5.88□□□□□ -1.47
LIG3-207ENST00000586119 C8orf87E5RJ46 101 aa5.88□□□□□ -1.47
LIG3-207ENST00000586119 MT2AP02795 61 aa5.88□□□□□ -1.47
LIG3-207ENST00000586119 A8MUU9 505 aa5.87□□□□□ -1.47
LIG3-207ENST00000586119 BPY2O14599 106 aa5.87□□□□□ -1.47
LIG3-207ENST00000586119 LCE2BO14633 110 aa5.87□□□□□ -1.47
LIG3-207ENST00000586119 LINC00313P59037 77 aa5.87□□□□□ -1.47
LIG3-207ENST00000586119 C20orf166-AS1Q96NR2 134 aa5.87□□□□□ -1.47
LIG3-207ENST00000586119 TRAV7A0A075B6U4 112 aa5.86□□□□□ -1.47
LIG3-207ENST00000586119 A0A087WVE0 104 aa5.86□□□□□ -1.47
LIG3-207ENST00000586119 IGHV6-1A0A0B4J1U7 121 aa5.85□□□□□ -1.47
LIG3-207ENST00000586119 MT1FP04733 61 aa5.85□□□□□ -1.47
LIG3-207ENST00000586119 KRTAP19-1Q8IUB9 90 aa5.85□□□□□ -1.47
LIG3-207ENST00000586119 DSCR10P59022 87 aa5.84□□□□□ -1.47
LIG3-207ENST00000586119 PRR15Q8IV56 129 aa5.84□□□□□ -1.47
LIG3-207ENST00000586119 NDUFC1O43677 76 aa5.82□□□□□ -1.48
LIG3-207ENST00000586119 KRTAP9-3Q9BYQ3 159 aa5.82□□□□□ -1.48
LIG3-207ENST00000586119 KLKP1Q107X0 134 aa5.81□□□□□ -1.48
LIG3-207ENST00000586119 C8orf17Q9NRJ1 99 aa5.81□□□□□ -1.48
LIG3-207ENST00000586119 SYNE2Q8WXH0 6885 aaKnown RBP5.8□□□□□ -1.48
LIG3-207ENST00000586119 ATP5EP56381 51 aaPredicted RBP5.8□□□□□ -1.48
LIG3-207ENST00000586119 NOTCH2NLQ7Z3S9 236 aa5.8□□□□□ -1.48
LIG3-207ENST00000586119 K7EQZ3 153 aa5.79□□□□□ -1.48
LIG3-207ENST00000586119 MACF1Q9UPN3 7388 aaKnown RBP5.77□□□□□ -1.49
LIG3-207ENST00000586119 FAM236DA0A1B0GTK5 79 aa5.77□□□□□ -1.49
LIG3-207ENST00000586119 FAM236CP0DP71 79 aa5.77□□□□□ -1.49
LIG3-207ENST00000586119 HRES1P13985 223 aa5.77□□□□□ -1.49
LIG3-207ENST00000586119 KRTAP10-10P60014 251 aa5.77□□□□□ -1.49
LIG3-207ENST00000586119 MMP24-AS1A0A0U1RRL7 71 aa5.76□□□□□ -1.49
LIG3-207ENST00000586119 C20orf197Q8N268 126 aa5.76□□□□□ -1.49
LIG3-207ENST00000586119 MPLKIPQ8TAP9 179 aa5.76□□□□□ -1.49
LIG3-207ENST00000586119 Q8N9P0 234 aaPredicted RBP5.75□□□□□ -1.49
LIG3-207ENST00000586119 TMEM254Q8TBM7 123 aa5.75□□□□□ -1.49
LIG3-207ENST00000586119 CYSTM1Q9H1C7 97 aa5.75□□□□□ -1.49
LIG3-207ENST00000586119 SERP1Q9Y6X1 66 aa5.75□□□□□ -1.49
LIG3-207ENST00000586119 hDV103S1A0JD37 113 aa5.74□□□□□ -1.49
LIG3-207ENST00000586119 H7BZZ5 65 aa5.74□□□□□ -1.49
LIG3-207ENST00000586119 C5orf47Q569G3 176 aa5.74□□□□□ -1.49
LIG3-207ENST00000586119 Q8N9L7 120 aa5.74□□□□□ -1.49
LIG3-207ENST00000586119 MRPL34Q9BQ48 92 aaKnown RBP5.74□□□□□ -1.49
LIG3-207ENST00000586119 HCG22E2RYF7 251 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms