RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 LINC00472Q9H8W2 130 aa7.31□□□□□ -1.24
VMP1-202ENST00000585847 NDUFB1O75438 58 aa7.3□□□□□ -1.24
VMP1-202ENST00000585847 A0A0G2JQZ4 141 aa7.28□□□□□ -1.24
VMP1-202ENST00000585847 A8MWP4 228 aa7.28□□□□□ -1.24
VMP1-202ENST00000585847 IGKV3D-7A0A0C4DH55 119 aa7.27□□□□□ -1.25
VMP1-202ENST00000585847 LRP2P98164 4655 aa7.27□□□□□ -1.25
VMP1-202ENST00000585847 HRCT1Q6UXD1 115 aa7.26□□□□□ -1.25
VMP1-202ENST00000585847 HIST1H4AP62805 103 aaKnown RBP7.25□□□□□ -1.25
VMP1-202ENST00000585847 IGKV4-1P06312 121 aa7.23□□□□□ -1.25
VMP1-202ENST00000585847 DSCR10P59022 87 aa7.23□□□□□ -1.25
VMP1-202ENST00000585847 PRR15Q8IV56 129 aa7.23□□□□□ -1.25
VMP1-202ENST00000585847 Q96NJ1 140 aa7.23□□□□□ -1.25
VMP1-202ENST00000585847 SMIM20Q8N5G0 67 aa7.22□□□□□ -1.25
VMP1-202ENST00000585847 C8orf87E5RJ46 101 aa7.21□□□□□ -1.26
VMP1-202ENST00000585847 ATOX1O00244 68 aa7.2□□□□□ -1.26
VMP1-202ENST00000585847 A0A1B0GVX0 72 aa7.19□□□□□ -1.26
VMP1-202ENST00000585847 FAM236AA0A1B0GUQ0 79 aa7.18□□□□□ -1.26
VMP1-202ENST00000585847 FAM236BA0A1B0GV22 79 aa7.18□□□□□ -1.26
VMP1-202ENST00000585847 K7EQZ3 153 aa7.18□□□□□ -1.26
VMP1-202ENST00000585847 C1orf195Q5TG92 126 aa7.18□□□□□ -1.26
VMP1-202ENST00000585847 HCG22E2RYF7 251 aa7.17□□□□□ -1.26
VMP1-202ENST00000585847 FP248Q71RG6 208 aaPredicted RBP7.16□□□□□ -1.26
VMP1-202ENST00000585847 A0A087WVE0 104 aa7.14□□□□□ -1.27
VMP1-202ENST00000585847 DEFB116Q30KQ4 102 aa7.13□□□□□ -1.27
VMP1-202ENST00000585847 Q8N9L7 120 aa7.13□□□□□ -1.27
VMP1-202ENST00000585847 CASC2Q6XLA1 102 aa7.12□□□□□ -1.27
VMP1-202ENST00000585847 TMEM254Q8TBM7 123 aa7.11□□□□□ -1.27
VMP1-202ENST00000585847 RETNLBQ9BQ08 111 aa7.11□□□□□ -1.27
VMP1-202ENST00000585847 C8orf17Q9NRJ1 99 aa7.11□□□□□ -1.27
VMP1-202ENST00000585847 IGHV6-1A0A0B4J1U7 121 aa7.1□□□□□ -1.27
VMP1-202ENST00000585847 MMP24-AS1A0A0U1RRL7 71 aa7.1□□□□□ -1.27
VMP1-202ENST00000585847 hDV103S1A0JD37 113 aa7.1□□□□□ -1.27
VMP1-202ENST00000585847 TP53AIP1Q9HCN2 124 aa7.09□□□□□ -1.27
VMP1-202ENST00000585847 TRAV7A0A075B6U4 112 aa7.07□□□□□ -1.28
VMP1-202ENST00000585847 LINC00313P59037 77 aa7.07□□□□□ -1.28
VMP1-202ENST00000585847 ANAPC13Q9BS18 74 aa7.07□□□□□ -1.28
VMP1-202ENST00000585847 SERP2Q8N6R1 65 aa7.06□□□□□ -1.28
VMP1-202ENST00000585847 LPAP08519 4548 aa7.05□□□□□ -1.28
VMP1-202ENST00000585847 MRPL34Q9BQ48 92 aaKnown RBP7.05□□□□□ -1.28
VMP1-202ENST00000585847 UQCRQO14949 82 aa7.03□□□□□ -1.28
VMP1-202ENST00000585847 PRR4Q16378 134 aa7.03□□□□□ -1.28
VMP1-202ENST00000585847 WFDC13Q8IUB5 93 aa7.03□□□□□ -1.28
VMP1-202ENST00000585847 OCR1Q9BZK8 76 aa7.02□□□□□ -1.29
VMP1-202ENST00000585847 COX7CP15954 63 aa7□□□□□ -1.29
VMP1-202ENST00000585847 Q8N9P0 234 aaPredicted RBP7□□□□□ -1.29
VMP1-202ENST00000585847 IGLV7-46A0A075B6I9 117 aa6.99□□□□□ -1.29
VMP1-202ENST00000585847 H3BPC8 53 aa6.99□□□□□ -1.29
VMP1-202ENST00000585847 C5orf47Q569G3 176 aa6.99□□□□□ -1.29
VMP1-202ENST00000585847 A0A0U1RQV1 116 aa6.98□□□□□ -1.29
VMP1-202ENST00000585847 PCP4P48539 62 aa6.98□□□□□ -1.29
VMP1-202ENST00000585847 MP68P56378 58 aa6.97□□□□□ -1.29
VMP1-202ENST00000585847 MUC2Q02817 5179 aa6.95□□□□□ -1.3
VMP1-202ENST00000585847 KRTAP16-1A8MUX0 517 aa6.95□□□□□ -1.3
VMP1-202ENST00000585847 KRTAP13-3Q3SY46 172 aa6.95□□□□□ -1.3
VMP1-202ENST00000585847 TRAV22A0A0B4J277 110 aa6.94□□□□□ -1.3
VMP1-202ENST00000585847 NDUFS5O43920 106 aa6.94□□□□□ -1.3
VMP1-202ENST00000585847 TPRXLQ17RH7 258 aa6.94□□□□□ -1.3
VMP1-202ENST00000585847 C20orf166-AS1Q96NR2 134 aa6.93□□□□□ -1.3
VMP1-202ENST00000585847 NDUFC1O43677 76 aa6.92□□□□□ -1.3
VMP1-202ENST00000585847 NOTCH2NLQ7Z3S9 236 aa6.92□□□□□ -1.3
VMP1-202ENST00000585847 KLKP1Q107X0 134 aa6.91□□□□□ -1.3
VMP1-202ENST00000585847 Q75L30 129 aa6.91□□□□□ -1.3
VMP1-202ENST00000585847 KRTAP9-2Q9BYQ4 174 aa6.91□□□□□ -1.3
VMP1-202ENST00000585847 A8MUU9 505 aa6.9□□□□□ -1.3
VMP1-202ENST00000585847 MUC17Q685J3 4493 aa6.89□□□□□ -1.31
VMP1-202ENST00000585847 LOC101927531A0A1B0GV80 90 aa6.87□□□□□ -1.31
VMP1-202ENST00000585847 H0Y9P7 68 aa6.87□□□□□ -1.31
VMP1-202ENST00000585847 C9orf92A6NGG3 77 aa6.85□□□□□ -1.31
VMP1-202ENST00000585847 C20orf197Q8N268 126 aa6.85□□□□□ -1.31
VMP1-202ENST00000585847 XP32Q5T750 250 aa6.84□□□□□ -1.31
VMP1-202ENST00000585847 ZCCHC13Q8WW36 166 aaKnown RBP6.84□□□□□ -1.31
VMP1-202ENST00000585847 FAT4Q6V0I7 4981 aa6.81□□□□□ -1.32
VMP1-202ENST00000585847 CCDC179H3BU77 68 aa6.81□□□□□ -1.32
VMP1-202ENST00000585847 RPL37P61927 97 aaKnown RBP6.81□□□□□ -1.32
VMP1-202ENST00000585847 C1orf64Q8NEQ6 169 aa6.81□□□□□ -1.32
VMP1-202ENST00000585847 ATP11AUNQ6ZP68 121 aa6.8□□□□□ -1.32
VMP1-202ENST00000585847 LINC00208Q96KT6 92 aa6.8□□□□□ -1.32
VMP1-202ENST00000585847 KRTAP9-6A0A140TA67 174 aa6.78□□□□□ -1.32
VMP1-202ENST00000585847 ATP5EP56381 51 aaPredicted RBP6.78□□□□□ -1.32
VMP1-202ENST00000585847 TMEM258P61165 79 aa6.77□□□□□ -1.33
VMP1-202ENST00000585847 Q5W150 140 aa6.76□□□□□ -1.33
VMP1-202ENST00000585847 C7orf65Q6ZTY9 151 aa6.76□□□□□ -1.33
VMP1-202ENST00000585847 IGKV2-30P06310 120 aa6.74□□□□□ -1.33
VMP1-202ENST00000585847 SPANXA2-OT1Q8N9U9 137 aa6.74□□□□□ -1.33
VMP1-202ENST00000585847 SNURFQ9Y675 71 aa6.74□□□□□ -1.33
VMP1-202ENST00000585847 H7BZZ5 65 aa6.72□□□□□ -1.33
VMP1-202ENST00000585847 CYP4F30PQ9H0H9 118 aa6.72□□□□□ -1.33
VMP1-202ENST00000585847 SEC61BP60468 96 aaKnown RBP6.71□□□□□ -1.34
VMP1-202ENST00000585847 KRTAP4-1Q9BYQ7 146 aa6.71□□□□□ -1.34
VMP1-202ENST00000585847 LOC100996750A0A140TA64 210 aa6.68□□□□□ -1.34
VMP1-202ENST00000585847 KRTAP4-6Q9BYQ5 205 aa6.68□□□□□ -1.34
VMP1-202ENST00000585847 PCOTHQ58A44 107 aa6.67□□□□□ -1.34
VMP1-202ENST00000585847 IGKV2D-30A0A075B6S6 120 aa6.66□□□□□ -1.34
VMP1-202ENST00000585847 FAM236DA0A1B0GTK5 79 aa6.65□□□□□ -1.34
VMP1-202ENST00000585847 FAM236CP0DP71 79 aa6.65□□□□□ -1.34
VMP1-202ENST00000585847 A8MUN3 132 aa6.63□□□□□ -1.35
VMP1-202ENST00000585847 SPINK7P58062 85 aa6.63□□□□□ -1.35
VMP1-202ENST00000585847 CYSTM1Q9H1C7 97 aa6.62□□□□□ -1.35
VMP1-202ENST00000585847 HRES1P13985 223 aa6.58□□□□□ -1.36
VMP1-202ENST00000585847 DMAC1Q96GE9 116 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms