RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 LRP2P98164 4655 aa6.08□□□□□ -1.44
LIG3-203ENST00000585370 A0A087X002 238 aa6.08□□□□□ -1.44
LIG3-203ENST00000585370 KRTAP13-2Q52LG2 175 aa6.08□□□□□ -1.44
LIG3-203ENST00000585370 SERP2Q8N6R1 65 aa6.08□□□□□ -1.44
LIG3-203ENST00000585370 UQCRQO14949 82 aa6.07□□□□□ -1.44
LIG3-203ENST00000585370 MT1HL1P0DM35 61 aa6.07□□□□□ -1.44
LIG3-203ENST00000585370 COX7CP15954 63 aa6.07□□□□□ -1.44
LIG3-203ENST00000585370 C4orf48Q5BLP8 95 aa6.07□□□□□ -1.44
LIG3-203ENST00000585370 PRR15Q8IV56 129 aa6.07□□□□□ -1.44
LIG3-203ENST00000585370 Q8N9L7 120 aa6.07□□□□□ -1.44
LIG3-203ENST00000585370 TYMSOSQ8TAI1 123 aa6.07□□□□□ -1.44
LIG3-203ENST00000585370 TRAV7A0A075B6U4 112 aa6.06□□□□□ -1.44
LIG3-203ENST00000585370 K7EQZ3 153 aa6.06□□□□□ -1.44
LIG3-203ENST00000585370 DEFB116Q30KQ4 102 aa6.06□□□□□ -1.44
LIG3-203ENST00000585370 SPAG11AQ6PDA7 123 aa6.06□□□□□ -1.44
LIG3-203ENST00000585370 LIMD2Q9BT23 127 aa6.06□□□□□ -1.44
LIG3-203ENST00000585370 HCG22E2RYF7 251 aa6.05□□□□□ -1.44
LIG3-203ENST00000585370 Q96NJ1 140 aa6.05□□□□□ -1.44
LIG3-203ENST00000585370 SPINK1P00995 79 aa6.04□□□□□ -1.44
LIG3-203ENST00000585370 RPS29P62273 56 aaKnown RBP6.03□□□□□ -1.44
LIG3-203ENST00000585370 RNF213Q63HN8 5207 aa6□□□□□ -1.45
LIG3-203ENST00000585370 A0A1B0GVX0 72 aa6□□□□□ -1.45
LIG3-203ENST00000585370 CCDC179H3BU77 68 aa5.99□□□□□ -1.45
LIG3-203ENST00000585370 CASC2Q6XLA1 102 aa5.99□□□□□ -1.45
LIG3-203ENST00000585370 PRR26Q8N8Z3 221 aa5.99□□□□□ -1.45
LIG3-203ENST00000585370 LINC00304Q8N9R0 145 aa5.99□□□□□ -1.45
LIG3-203ENST00000585370 OCR1Q9BZK8 76 aa5.99□□□□□ -1.45
LIG3-203ENST00000585370 C8orf87E5RJ46 101 aa5.97□□□□□ -1.45
LIG3-203ENST00000585370 C8orf17Q9NRJ1 99 aa5.97□□□□□ -1.45
LIG3-203ENST00000585370 MMP24-AS1A0A0U1RRL7 71 aa5.96□□□□□ -1.46
LIG3-203ENST00000585370 hDV103S1A0JD37 113 aa5.96□□□□□ -1.46
LIG3-203ENST00000585370 C1orf195Q5TG92 126 aa5.96□□□□□ -1.46
LIG3-203ENST00000585370 WFDC13Q8IUB5 93 aa5.96□□□□□ -1.46
LIG3-203ENST00000585370 IGHV6-1A0A0B4J1U7 121 aa5.95□□□□□ -1.46
LIG3-203ENST00000585370 C5orf47Q569G3 176 aa5.95□□□□□ -1.46
LIG3-203ENST00000585370 TMEM254Q8TBM7 123 aa5.94□□□□□ -1.46
LIG3-203ENST00000585370 TP53AIP1Q9HCN2 124 aa5.94□□□□□ -1.46
LIG3-203ENST00000585370 KRTAP10-8P60410 259 aa5.92□□□□□ -1.46
LIG3-203ENST00000585370 KLKP1Q107X0 134 aa5.92□□□□□ -1.46
LIG3-203ENST00000585370 LPAP08519 4548 aa5.91□□□□□ -1.46
LIG3-203ENST00000585370 NDUFC1O43677 76 aa5.91□□□□□ -1.46
LIG3-203ENST00000585370 C20orf197Q8N268 126 aa5.91□□□□□ -1.46
LIG3-203ENST00000585370 MRPL34Q9BQ48 92 aaKnown RBP5.91□□□□□ -1.46
LIG3-203ENST00000585370 H3BPC8 53 aa5.9□□□□□ -1.46
LIG3-203ENST00000585370 LINC00313P59037 77 aa5.9□□□□□ -1.46
LIG3-203ENST00000585370 MP68P56378 58 aa5.89□□□□□ -1.47
LIG3-203ENST00000585370 A0A0U1RQV1 116 aa5.87□□□□□ -1.47
LIG3-203ENST00000585370 TMEM258P61165 79 aa5.85□□□□□ -1.47
LIG3-203ENST00000585370 NOTCH2NLQ7Z3S9 236 aa5.85□□□□□ -1.47
LIG3-203ENST00000585370 NDUFS5O43920 106 aa5.84□□□□□ -1.47
LIG3-203ENST00000585370 TRAV22A0A0B4J277 110 aa5.83□□□□□ -1.48
LIG3-203ENST00000585370 H0Y9P7 68 aa5.83□□□□□ -1.48
LIG3-203ENST00000585370 Q8N9P0 234 aaPredicted RBP5.83□□□□□ -1.48
LIG3-203ENST00000585370 SNURFQ9Y675 71 aa5.83□□□□□ -1.48
LIG3-203ENST00000585370 ZCCHC13Q8WW36 166 aaKnown RBP5.82□□□□□ -1.48
LIG3-203ENST00000585370 H7BZZ5 65 aa5.81□□□□□ -1.48
LIG3-203ENST00000585370 LCE2AQ5TA79 106 aaPredicted RBP5.81□□□□□ -1.48
LIG3-203ENST00000585370 CYSTM1Q9H1C7 97 aa5.8□□□□□ -1.48
LIG3-203ENST00000585370 KRTAP16-1A8MUX0 517 aa5.79□□□□□ -1.48
LIG3-203ENST00000585370 ATP5EP56381 51 aaPredicted RBP5.79□□□□□ -1.48
LIG3-203ENST00000585370 C1orf64Q8NEQ6 169 aa5.79□□□□□ -1.48
LIG3-203ENST00000585370 LINC00208Q96KT6 92 aa5.79□□□□□ -1.48
LIG3-203ENST00000585370 MUC2Q02817 5179 aa5.79□□□□□ -1.48
LIG3-203ENST00000585370 FP248Q71RG6 208 aaPredicted RBP5.78□□□□□ -1.48
LIG3-203ENST00000585370 LOC101927531A0A1B0GV80 90 aa5.75□□□□□ -1.49
LIG3-203ENST00000585370 FAM236DA0A1B0GTK5 79 aa5.74□□□□□ -1.49
LIG3-203ENST00000585370 FAM236CP0DP71 79 aa5.74□□□□□ -1.49
LIG3-203ENST00000585370 RPS28P62857 69 aaKnown RBP5.73□□□□□ -1.49
LIG3-203ENST00000585370 KRTAP13-3Q3SY46 172 aa5.72□□□□□ -1.49
LIG3-203ENST00000585370 SPANXA2-OT1Q8N9U9 137 aa5.72□□□□□ -1.49
LIG3-203ENST00000585370 Q5W150 140 aa5.71□□□□□ -1.5
LIG3-203ENST00000585370 C20orf166-AS1Q96NR2 134 aa5.71□□□□□ -1.5
LIG3-203ENST00000585370 A8MUU9 505 aa5.7□□□□□ -1.5
LIG3-203ENST00000585370 LCE2CQ5TA81 110 aa5.7□□□□□ -1.5
LIG3-203ENST00000585370 RETNLBQ9BQ08 111 aa5.7□□□□□ -1.5
LIG3-203ENST00000585370 CYP4F30PQ9H0H9 118 aa5.68□□□□□ -1.5
LIG3-203ENST00000585370 SERP1Q9Y6X1 66 aa5.68□□□□□ -1.5
LIG3-203ENST00000585370 IGLV7-46A0A075B6I9 117 aa5.67□□□□□ -1.5
LIG3-203ENST00000585370 C9orf92A6NGG3 77 aa5.67□□□□□ -1.5
LIG3-203ENST00000585370 IGKV2-30P06310 120 aa5.66□□□□□ -1.5
LIG3-203ENST00000585370 Q75L30 129 aa5.66□□□□□ -1.5
LIG3-203ENST00000585370 PRR4Q16378 134 aa5.65□□□□□ -1.5
LIG3-203ENST00000585370 PCOTHQ58A44 107 aa5.63□□□□□ -1.51
LIG3-203ENST00000585370 FAT4Q6V0I7 4981 aa5.62□□□□□ -1.51
LIG3-203ENST00000585370 C7orf65Q6ZTY9 151 aa5.6□□□□□ -1.51
LIG3-203ENST00000585370 ATP11AUNQ6ZP68 121 aa5.59□□□□□ -1.51
LIG3-203ENST00000585370 IGKV2D-30A0A075B6S6 120 aa5.58□□□□□ -1.52
LIG3-203ENST00000585370 TPRXLQ17RH7 258 aa5.58□□□□□ -1.52
LIG3-203ENST00000585370 MUC17Q685J3 4493 aa5.58□□□□□ -1.52
LIG3-203ENST00000585370 RPL37P61927 97 aaKnown RBP5.57□□□□□ -1.52
LIG3-203ENST00000585370 HRES1P13985 223 aa5.56□□□□□ -1.52
LIG3-203ENST00000585370 LORP23490 312 aaPredicted RBP5.56□□□□□ -1.52
LIG3-203ENST00000585370 SMIM26A0A096LP01 95 aa5.55□□□□□ -1.52
LIG3-203ENST00000585370 XP32Q5T750 250 aa5.55□□□□□ -1.52
LIG3-203ENST00000585370 ACYP2P14621 99 aa5.54□□□□□ -1.52
LIG3-203ENST00000585370 KRTAP9-2Q9BYQ4 174 aa5.54□□□□□ -1.52
LIG3-203ENST00000585370 SPINK7P58062 85 aa5.51□□□□□ -1.53
LIG3-203ENST00000585370 DMAC1Q96GE9 116 aa5.51□□□□□ -1.53
LIG3-203ENST00000585370 A8MUN3 132 aa5.5□□□□□ -1.53
LIG3-203ENST00000585370 COA5Q86WW8 74 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms