RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 IGHV6-1A0A0B4J1U7 121 aa8.48□□□□□ -1.05
CDK5RAP3-237ENST00000585163 DNAH8Q96JB1 4490 aa8.48□□□□□ -1.05
CDK5RAP3-237ENST00000585163 FRAS1Q86XX4 4008 aa8.47□□□□□ -1.05
CDK5RAP3-237ENST00000585163 PRKDCP78527 4128 aaKnown RBP8.47□□□□□ -1.05
CDK5RAP3-237ENST00000585163 Q8N9P0 234 aaPredicted RBP8.47□□□□□ -1.05
CDK5RAP3-237ENST00000585163 ANAPC11Q9NYG5 84 aa8.47□□□□□ -1.05
CDK5RAP3-237ENST00000585163 Q5VV11 94 aa8.46□□□□□ -1.06
CDK5RAP3-237ENST00000585163 CDK2AP2O75956 126 aa8.45□□□□□ -1.06
CDK5RAP3-237ENST00000585163 PCOTHQ58A44 107 aa8.44□□□□□ -1.06
CDK5RAP3-237ENST00000585163 LIMD2Q9BT23 127 aa8.44□□□□□ -1.06
CDK5RAP3-237ENST00000585163 COA5Q86WW8 74 aa8.44□□□□□ -1.06
CDK5RAP3-237ENST00000585163 MRPL34Q9BQ48 92 aaKnown RBP8.44□□□□□ -1.06
CDK5RAP3-237ENST00000585163 DNAH17Q9UFH2 4485 aa8.44□□□□□ -1.06
CDK5RAP3-237ENST00000585163 DNAH2Q9P225 4427 aa8.43□□□□□ -1.06
CDK5RAP3-237ENST00000585163 KMT2AQ03164 3969 aa8.43□□□□□ -1.06
CDK5RAP3-237ENST00000585163 A0A087X002 238 aa8.41□□□□□ -1.06
CDK5RAP3-237ENST00000585163 NOTCH2NLQ7Z3S9 236 aa8.41□□□□□ -1.06
CDK5RAP3-237ENST00000585163 CHKB-CPT1BH3BT56 60 aa8.4□□□□□ -1.07
CDK5RAP3-237ENST00000585163 LINC00313P59037 77 aa8.39□□□□□ -1.07
CDK5RAP3-237ENST00000585163 FBN3Q75N90 2809 aa8.38□□□□□ -1.07
CDK5RAP3-237ENST00000585163 LINC01554Q52M75 96 aa8.38□□□□□ -1.07
CDK5RAP3-237ENST00000585163 IGLV7-43P04211 117 aa8.37□□□□□ -1.07
CDK5RAP3-237ENST00000585163 PRR15LQ9BU68 103 aa8.37□□□□□ -1.07
CDK5RAP3-237ENST00000585163 LOC101927531A0A1B0GV80 90 aa8.35□□□□□ -1.07
CDK5RAP3-237ENST00000585163 C1orf134Q5TEV5 83 aa8.34□□□□□ -1.07
CDK5RAP3-237ENST00000585163 SPINK6Q6UWN8 80 aa8.34□□□□□ -1.07
CDK5RAP3-237ENST00000585163 CIRBP-AS1Q8TBR5 109 aa8.32□□□□□ -1.08
CDK5RAP3-237ENST00000585163 MEGF8Q7Z7M0 2845 aa8.32□□□□□ -1.08
CDK5RAP3-237ENST00000585163 Q75L30 129 aa8.32□□□□□ -1.08
CDK5RAP3-237ENST00000585163 TGP01266 2768 aa8.31□□□□□ -1.08
CDK5RAP3-237ENST00000585163 KRTAP13-3Q3SY46 172 aa8.31□□□□□ -1.08
CDK5RAP3-237ENST00000585163 HRES1P13985 223 aa8.3□□□□□ -1.08
CDK5RAP3-237ENST00000585163 Q5W150 140 aa8.3□□□□□ -1.08
CDK5RAP3-237ENST00000585163 CDC42SE1Q9NRR8 79 aa8.3□□□□□ -1.08
CDK5RAP3-237ENST00000585163 SSBP3-AS1Q7Z2R9 100 aa8.3□□□□□ -1.08
CDK5RAP3-237ENST00000585163 ALMS1Q8TCU4 4167 aa8.29□□□□□ -1.08
CDK5RAP3-237ENST00000585163 DNHD1Q96M86 4753 aa8.28□□□□□ -1.08
CDK5RAP3-237ENST00000585163 LINC01558Q9Y6Z2 57 aa8.28□□□□□ -1.08
CDK5RAP3-237ENST00000585163 SPAG11AQ6PDA7 123 aa8.27□□□□□ -1.09
CDK5RAP3-237ENST00000585163 A6NED7 52 aa8.27□□□□□ -1.09
CDK5RAP3-237ENST00000585163 DNAH6Q9C0G6 4158 aa8.25□□□□□ -1.09
CDK5RAP3-237ENST00000585163 DNAH11Q96DT5 4516 aa8.25□□□□□ -1.09
CDK5RAP3-237ENST00000585163 LY6G6CO95867 125 aa8.22□□□□□ -1.09
CDK5RAP3-237ENST00000585163 DNAH5Q8TE73 4624 aa8.22□□□□□ -1.09
CDK5RAP3-237ENST00000585163 KRTAP10-2P60368 255 aa8.21□□□□□ -1.1
CDK5RAP3-237ENST00000585163 A0A0A0MQY5 61 aa8.18□□□□□ -1.1
CDK5RAP3-237ENST00000585163 PRAC1Q96KF2 57 aa8.18□□□□□ -1.1
CDK5RAP3-237ENST00000585163 KRTAP13-2Q52LG2 175 aa8.18□□□□□ -1.1
CDK5RAP3-237ENST00000585163 ACYP2P14621 99 aa8.16□□□□□ -1.1
CDK5RAP3-237ENST00000585163 FAM229AH3BQW9 127 aa8.15□□□□□ -1.1
CDK5RAP3-237ENST00000585163 Q6ZSA8 131 aa8.14□□□□□ -1.11
CDK5RAP3-237ENST00000585163 DMAC1Q96GE9 116 aa8.13□□□□□ -1.11
CDK5RAP3-237ENST00000585163 LRP1BQ9NZR2 4599 aa8.12□□□□□ -1.11
CDK5RAP3-237ENST00000585163 SPINK7P58062 85 aa8.11□□□□□ -1.11
CDK5RAP3-237ENST00000585163 PLA2G1BP04054 148 aaKnown RBP8.1□□□□□ -1.11
CDK5RAP3-237ENST00000585163 KRTAP10-1P60331 282 aa8.1□□□□□ -1.11
CDK5RAP3-237ENST00000585163 KRTAP16-1A8MUX0 517 aa8.1□□□□□ -1.11
CDK5RAP3-237ENST00000585163 IGKV2-30P06310 120 aa8.1□□□□□ -1.11
CDK5RAP3-237ENST00000585163 PKD1P98161 4303 aa8.09□□□□□ -1.11
CDK5RAP3-237ENST00000585163 KRTAP1-4P0C5Y4 121 aa8.08□□□□□ -1.12
CDK5RAP3-237ENST00000585163 RETNLBQ9BQ08 111 aa8.08□□□□□ -1.12
CDK5RAP3-237ENST00000585163 FAT2Q9NYQ8 4349 aa8.04□□□□□ -1.12
CDK5RAP3-237ENST00000585163 ADM2Q7Z4H4 148 aa8.03□□□□□ -1.12
CDK5RAP3-237ENST00000585163 VPS13BQ7Z7G8 4022 aa8.02□□□□□ -1.12
CDK5RAP3-237ENST00000585163 HYDINQ4G0P3 5121 aa8.01□□□□□ -1.13
CDK5RAP3-237ENST00000585163 KRTAP21-3Q3LHN1 58 aa7.97□□□□□ -1.13
CDK5RAP3-237ENST00000585163 IGKV2D-30A0A075B6S6 120 aa7.97□□□□□ -1.13
CDK5RAP3-237ENST00000585163 SPINK1P00995 79 aa7.96□□□□□ -1.13
CDK5RAP3-237ENST00000585163 TYMSOSQ8TAI1 123 aa7.96□□□□□ -1.14
CDK5RAP3-237ENST00000585163 A0A1B0GU69 56 aa7.95□□□□□ -1.14
CDK5RAP3-237ENST00000585163 RPS29P62273 56 aaKnown RBP7.87□□□□□ -1.15
CDK5RAP3-237ENST00000585163 SPATA8Q6RVD6 105 aa7.86□□□□□ -1.15
CDK5RAP3-237ENST00000585163 LINC00304Q8N9R0 145 aa7.85□□□□□ -1.15
CDK5RAP3-237ENST00000585163 CSAG1Q6PB30 78 aa7.83□□□□□ -1.16
CDK5RAP3-237ENST00000585163 PKHD1P08F94 4074 aa7.83□□□□□ -1.16
CDK5RAP3-237ENST00000585163 UQCR11O14957 56 aa7.82□□□□□ -1.16
CDK5RAP3-237ENST00000585163 MIR22HGQ0VDD5 57 aa7.8□□□□□ -1.16
CDK5RAP3-237ENST00000585163 ROMO1P60602 79 aa7.8□□□□□ -1.16
CDK5RAP3-237ENST00000585163 SACSQ9NZJ4 4579 aa7.8□□□□□ -1.16
CDK5RAP3-237ENST00000585163 Q8N1X5 172 aa7.78□□□□□ -1.16
CDK5RAP3-237ENST00000585163 SMR3BP02814 79 aaPredicted RBP7.72□□□□□ -1.17
CDK5RAP3-237ENST00000585163 C20orf166-AS1Q96NR2 134 aa7.72□□□□□ -1.17
CDK5RAP3-237ENST00000585163 A8MUU9 505 aa7.72□□□□□ -1.17
CDK5RAP3-237ENST00000585163 DYNC1H1Q14204 4646 aaKnown RBP7.71□□□□□ -1.18
CDK5RAP3-237ENST00000585163 C9orf92A6NGG3 77 aa7.7□□□□□ -1.18
CDK5RAP3-237ENST00000585163 PKHD1L1Q86WI1 4243 aa7.7□□□□□ -1.18
CDK5RAP3-237ENST00000585163 KRTAP10-4P60372 401 aaPredicted RBP7.67□□□□□ -1.18
CDK5RAP3-237ENST00000585163 APOBP04114 4563 aaKnown RBP7.66□□□□□ -1.18
CDK5RAP3-237ENST00000585163 FAT1Q14517 4588 aa7.65□□□□□ -1.18
CDK5RAP3-237ENST00000585163 KRTAP3-1Q9BYR8 98 aa7.63□□□□□ -1.19
CDK5RAP3-237ENST00000585163 A0A1B0GVY2 172 aa7.63□□□□□ -1.19
CDK5RAP3-237ENST00000585163 P0C880 135 aa7.58□□□□□ -1.2
CDK5RAP3-237ENST00000585163 H0YAA0 97 aa7.55□□□□□ -1.2
CDK5RAP3-237ENST00000585163 KRTAP25-1Q3LHN0 102 aa7.52□□□□□ -1.21
CDK5RAP3-237ENST00000585163 A0A1B0GU33 70 aa7.51□□□□□ -1.21
CDK5RAP3-237ENST00000585163 COX6B2Q6YFQ2 88 aa7.49□□□□□ -1.21
CDK5RAP3-237ENST00000585163 FLG2Q5D862 2391 aaPredicted RBP7.49□□□□□ -1.21
CDK5RAP3-237ENST00000585163 H1FX-AS1Q4G0G2 97 aa7.48□□□□□ -1.21
CDK5RAP3-237ENST00000585163 RYR2Q92736 4967 aa7.44□□□□□ -1.22
CDK5RAP3-237ENST00000585163 FAT3Q8TDW7 4589 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms