RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 A0A1B0GVX0 72 aa10.11□□□□□ -0.79
RFFL-211ENST00000584541 K7ERU9 68 aa10.11□□□□□ -0.79
RFFL-211ENST00000584541 CDIP1Q9H305 208 aa10.11□□□□□ -0.79
RFFL-211ENST00000584541 IGHV6-1A0A0B4J1U7 121 aa10.1□□□□□ -0.79
RFFL-211ENST00000584541 DSCR10P59022 87 aa10.09□□□□□ -0.79
RFFL-211ENST00000584541 IGKV3D-7A0A0C4DH55 119 aa10.07□□□□□ -0.8
RFFL-211ENST00000584541 C8orf87E5RJ46 101 aa10.07□□□□□ -0.8
RFFL-211ENST00000584541 LINC00313P59037 77 aa10.07□□□□□ -0.8
RFFL-211ENST00000584541 CXCL6P80162 114 aa10.06□□□□□ -0.8
RFFL-211ENST00000584541 PRR15Q8IV56 129 aa10.06□□□□□ -0.8
RFFL-211ENST00000584541 K7EQZ3 153 aa10.04□□□□□ -0.8
RFFL-211ENST00000584541 ATP5EP2Q5VTU8 51 aa10.04□□□□□ -0.8
RFFL-211ENST00000584541 LINC00643Q86TS7 51 aa10.03□□□□□ -0.8
RFFL-211ENST00000584541 XP32Q5T750 250 aa10.01□□□□□ -0.81
RFFL-211ENST00000584541 Q8N9L7 120 aa10□□□□□ -0.81
RFFL-211ENST00000584541 C8orf17Q9NRJ1 99 aa10□□□□□ -0.81
RFFL-211ENST00000584541 NOTCH2NLQ7Z3S9 236 aa9.98□□□□□ -0.81
RFFL-211ENST00000584541 LPAP08519 4548 aa9.96□□□□□ -0.82
RFFL-211ENST00000584541 LRP2P98164 4655 aa9.95□□□□□ -0.82
RFFL-211ENST00000584541 MMP24-AS1A0A0U1RRL7 71 aa9.94□□□□□ -0.82
RFFL-211ENST00000584541 KRTAP16-1A8MUX0 517 aa9.93□□□□□ -0.82
RFFL-211ENST00000584541 hDV103S1A0JD37 113 aa9.91□□□□□ -0.82
RFFL-211ENST00000584541 HIST1H4AP62805 103 aaKnown RBP9.91□□□□□ -0.82
RFFL-211ENST00000584541 RPL37P61927 97 aaKnown RBP9.9□□□□□ -0.82
RFFL-211ENST00000584541 Q75L30 129 aa9.9□□□□□ -0.82
RFFL-211ENST00000584541 TMEM254Q8TBM7 123 aa9.9□□□□□ -0.82
RFFL-211ENST00000584541 C20orf166-AS1Q96NR2 134 aa9.9□□□□□ -0.82
RFFL-211ENST00000584541 HCG22E2RYF7 251 aa9.89□□□□□ -0.83
RFFL-211ENST00000584541 CASC2Q6XLA1 102 aa9.89□□□□□ -0.83
RFFL-211ENST00000584541 WFDC13Q8IUB5 93 aa9.89□□□□□ -0.83
RFFL-211ENST00000584541 A8MUU9 505 aa9.88□□□□□ -0.83
RFFL-211ENST00000584541 SEC61BP60468 96 aaKnown RBP9.88□□□□□ -0.83
RFFL-211ENST00000584541 RNF213Q63HN8 5207 aa9.88□□□□□ -0.83
RFFL-211ENST00000584541 MRPL34Q9BQ48 92 aaKnown RBP9.87□□□□□ -0.83
RFFL-211ENST00000584541 Q8N9P0 234 aaPredicted RBP9.84□□□□□ -0.83
RFFL-211ENST00000584541 ATP11AUNQ6ZP68 121 aa9.83□□□□□ -0.84
RFFL-211ENST00000584541 NDUFS5O43920 106 aa9.81□□□□□ -0.84
RFFL-211ENST00000584541 MT-ATP8P03928 68 aa9.78□□□□□ -0.84
RFFL-211ENST00000584541 PCOTHQ58A44 107 aa9.78□□□□□ -0.84
RFFL-211ENST00000584541 A0A087WVE0 104 aa9.77□□□□□ -0.85
RFFL-211ENST00000584541 IMUPQ9GZP8 106 aa9.77□□□□□ -0.85
RFFL-211ENST00000584541 KRTAP9-2Q9BYQ4 174 aa9.73□□□□□ -0.85
RFFL-211ENST00000584541 ZCCHC13Q8WW36 166 aaKnown RBP9.72□□□□□ -0.85
RFFL-211ENST00000584541 KRTAP9-6A0A140TA67 174 aa9.69□□□□□ -0.86
RFFL-211ENST00000584541 TP53AIP1Q9HCN2 124 aa9.69□□□□□ -0.86
RFFL-211ENST00000584541 MUC17Q685J3 4493 aa9.68□□□□□ -0.86
RFFL-211ENST00000584541 SCGB1A1P11684 91 aa9.63□□□□□ -0.87
RFFL-211ENST00000584541 FAM236AA0A1B0GUQ0 79 aa9.58□□□□□ -0.88
RFFL-211ENST00000584541 FAM236BA0A1B0GV22 79 aa9.58□□□□□ -0.88
RFFL-211ENST00000584541 Q5W150 140 aa9.58□□□□□ -0.88
RFFL-211ENST00000584541 UQCRQO14949 82 aa9.57□□□□□ -0.88
RFFL-211ENST00000584541 KRTAP4-1Q9BYQ7 146 aa9.56□□□□□ -0.88
RFFL-211ENST00000584541 TRAV22A0A0B4J277 110 aa9.53□□□□□ -0.88
RFFL-211ENST00000584541 OCR1Q9BZK8 76 aa9.52□□□□□ -0.89
RFFL-211ENST00000584541 SPINK7P58062 85 aa9.51□□□□□ -0.89
RFFL-211ENST00000584541 SMIM20Q8N5G0 67 aa9.5□□□□□ -0.89
RFFL-211ENST00000584541 IGKV2D-30A0A075B6S6 120 aa9.49□□□□□ -0.89
RFFL-211ENST00000584541 IGKV2-30P06310 120 aa9.49□□□□□ -0.89
RFFL-211ENST00000584541 ATOX1O00244 68 aa9.48□□□□□ -0.89
RFFL-211ENST00000584541 C7orf65Q6ZTY9 151 aa9.48□□□□□ -0.89
RFFL-211ENST00000584541 H0Y9P7 68 aa9.47□□□□□ -0.89
RFFL-211ENST00000584541 C5orf47Q569G3 176 aa9.45□□□□□ -0.9
RFFL-211ENST00000584541 MP68P56378 58 aa9.44□□□□□ -0.9
RFFL-211ENST00000584541 TRAV7A0A075B6U4 112 aa9.43□□□□□ -0.9
RFFL-211ENST00000584541 A0A0U1RQV1 116 aa9.42□□□□□ -0.9
RFFL-211ENST00000584541 LOC101927531A0A1B0GV80 90 aa9.42□□□□□ -0.9
RFFL-211ENST00000584541 MUC2Q02817 5179 aa9.41□□□□□ -0.9
RFFL-211ENST00000584541 HRES1P13985 223 aa9.39□□□□□ -0.91
RFFL-211ENST00000584541 RBM12B-AS1Q9P1G2 102 aa9.38□□□□□ -0.91
RFFL-211ENST00000584541 H3BPC8 53 aa9.37□□□□□ -0.91
RFFL-211ENST00000584541 C1orf64Q8NEQ6 169 aa9.37□□□□□ -0.91
RFFL-211ENST00000584541 LINC00208Q96KT6 92 aa9.37□□□□□ -0.91
RFFL-211ENST00000584541 CYP4F30PQ9H0H9 118 aa9.35□□□□□ -0.91
RFFL-211ENST00000584541 FAT4Q6V0I7 4981 aa9.33□□□□□ -0.92
RFFL-211ENST00000584541 COX6B2Q6YFQ2 88 aa9.33□□□□□ -0.92
RFFL-211ENST00000584541 SERP2Q8N6R1 65 aa9.33□□□□□ -0.92
RFFL-211ENST00000584541 FAM236DA0A1B0GTK5 79 aa9.32□□□□□ -0.92
RFFL-211ENST00000584541 FAM236CP0DP71 79 aa9.32□□□□□ -0.92
RFFL-211ENST00000584541 MPLKIPQ8TAP9 179 aa9.31□□□□□ -0.92
RFFL-211ENST00000584541 KRTAP19-2Q3LHN2 52 aa9.25□□□□□ -0.93
RFFL-211ENST00000584541 C4orf26Q17RF5 130 aa9.24□□□□□ -0.93
RFFL-211ENST00000584541 ANAPC13Q9BS18 74 aa9.22□□□□□ -0.93
RFFL-211ENST00000584541 COX7CP15954 63 aa9.21□□□□□ -0.94
RFFL-211ENST00000584541 KLKP1Q107X0 134 aa9.2□□□□□ -0.94
RFFL-211ENST00000584541 LCE2CQ5TA81 110 aa9.19□□□□□ -0.94
RFFL-211ENST00000584541 C20orf197Q8N268 126 aa9.19□□□□□ -0.94
RFFL-211ENST00000584541 SNURFQ9Y675 71 aa9.16□□□□□ -0.94
RFFL-211ENST00000584541 LCE2AQ5TA79 106 aaPredicted RBP9.15□□□□□ -0.94
RFFL-211ENST00000584541 H1FX-AS1Q4G0G2 97 aa9.12□□□□□ -0.95
RFFL-211ENST00000584541 MT1HP80294 61 aa9.07□□□□□ -0.96
RFFL-211ENST00000584541 KRTAP3-1Q9BYR8 98 aa9.06□□□□□ -0.96
RFFL-211ENST00000584541 A8MUN3 132 aa9.05□□□□□ -0.96
RFFL-211ENST00000584541 M0R2T5 61 aa9.04□□□□□ -0.96
RFFL-211ENST00000584541 CRCT1Q9UGL9 99 aa9.04□□□□□ -0.96
RFFL-211ENST00000584541 NDUFC1O43677 76 aa9.01□□□□□ -0.97
RFFL-211ENST00000584541 FLGP20930 4061 aaPredicted RBP8.98□□□□□ -0.97
RFFL-211ENST00000584541 CCDC179H3BU77 68 aa8.97□□□□□ -0.97
RFFL-211ENST00000584541 SPANXA2-OT1Q8N9U9 137 aa8.97□□□□□ -0.97
RFFL-211ENST00000584541 DMAC1Q96GE9 116 aa8.97□□□□□ -0.97
RFFL-211ENST00000584541 S4R3F8 94 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms