RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 TAX1BP3O14907 124 aa14.19□□□□□ -0.14
SMARCD2-210ENST00000584400 A0A1W2PPM0 123 aa14.18□□□□□ -0.14
SMARCD2-210ENST00000584400 C14orf132Q9NPU4 83 aa14.17□□□□□ -0.14
SMARCD2-210ENST00000584400 A0A1B0GVX0 72 aa14.16□□□□□ -0.14
SMARCD2-210ENST00000584400 KRTAP16-1A8MUX0 517 aa14.16□□□□□ -0.14
SMARCD2-210ENST00000584400 H3BT86 120 aa14.15□□□□□ -0.14
SMARCD2-210ENST00000584400 MT1HP80294 61 aa14.15□□□□□ -0.14
SMARCD2-210ENST00000584400 NDUFB1O75438 58 aa14.14□□□□□ -0.15
SMARCD2-210ENST00000584400 NOTCH2NLQ7Z3S9 236 aa14.13□□□□□ -0.15
SMARCD2-210ENST00000584400 KRTAP9-2Q9BYQ4 174 aa14.09□□□□□ -0.15
SMARCD2-210ENST00000584400 NREPQ16612 68 aa14.03□□□□□ -0.16
SMARCD2-210ENST00000584400 A8MWP4 228 aa14.02□□□□□ -0.17
SMARCD2-210ENST00000584400 SPCS1Q9Y6A9 102 aa14.02□□□□□ -0.17
SMARCD2-210ENST00000584400 M0R2T5 61 aa14.01□□□□□ -0.17
SMARCD2-210ENST00000584400 COL5A1-AS1Q5SY13 56 aa14□□□□□ -0.17
SMARCD2-210ENST00000584400 MTURNQ8N3F0 131 aa14□□□□□ -0.17
SMARCD2-210ENST00000584400 C8orf17Q9NRJ1 99 aa13.92□□□□□ -0.18
SMARCD2-210ENST00000584400 IGKV3D-7A0A0C4DH55 119 aa13.91□□□□□ -0.18
SMARCD2-210ENST00000584400 PRR15Q8IV56 129 aa13.89□□□□□ -0.19
SMARCD2-210ENST00000584400 Q8N9P0 234 aaPredicted RBP13.88□□□□□ -0.19
SMARCD2-210ENST00000584400 ZCCHC13Q8WW36 166 aaKnown RBP13.87□□□□□ -0.19
SMARCD2-210ENST00000584400 KRTAP10-6P60371 365 aaPredicted RBP13.85□□□□□ -0.19
SMARCD2-210ENST00000584400 LORP23490 312 aaPredicted RBP13.83□□□□□ -0.2
SMARCD2-210ENST00000584400 LCE2DQ5TA82 110 aaPredicted RBP13.83□□□□□ -0.2
SMARCD2-210ENST00000584400 Q6ZVQ6 151 aa13.83□□□□□ -0.2
SMARCD2-210ENST00000584400 RBM12B-AS1Q9P1G2 102 aa13.83□□□□□ -0.2
SMARCD2-210ENST00000584400 K7EP34 96 aa13.8□□□□□ -0.2
SMARCD2-210ENST00000584400 FAM236DA0A1B0GTK5 79 aa13.79□□□□□ -0.2
SMARCD2-210ENST00000584400 BPY2O14599 106 aa13.79□□□□□ -0.2
SMARCD2-210ENST00000584400 FAM236CP0DP71 79 aa13.79□□□□□ -0.2
SMARCD2-210ENST00000584400 SMCPP49901 116 aaPredicted RBP13.79□□□□□ -0.2
SMARCD2-210ENST00000584400 HRES1P13985 223 aa13.75□□□□□ -0.21
SMARCD2-210ENST00000584400 TMEM254Q8TBM7 123 aa13.75□□□□□ -0.21
SMARCD2-210ENST00000584400 K7EQZ3 153 aa13.73□□□□□ -0.21
SMARCD2-210ENST00000584400 GTF2H5Q6ZYL4 71 aa13.73□□□□□ -0.21
SMARCD2-210ENST00000584400 MRPL34Q9BQ48 92 aaKnown RBP13.73□□□□□ -0.21
SMARCD2-210ENST00000584400 PRO0461Q9UI25 63 aa13.73□□□□□ -0.21
SMARCD2-210ENST00000584400 MMP24-AS1A0A0U1RRL7 71 aa13.72□□□□□ -0.21
SMARCD2-210ENST00000584400 PCP4L1A6NKN8 68 aa13.72□□□□□ -0.21
SMARCD2-210ENST00000584400 MPLKIPQ8TAP9 179 aa13.71□□□□□ -0.21
SMARCD2-210ENST00000584400 hDV103S1A0JD37 113 aa13.7□□□□□ -0.22
SMARCD2-210ENST00000584400 SPINK7P58062 85 aa13.7□□□□□ -0.22
SMARCD2-210ENST00000584400 FLGP20930 4061 aaPredicted RBP13.68□□□□□ -0.22
SMARCD2-210ENST00000584400 UBL5Q9BZL1 73 aa13.65□□□□□ -0.22
SMARCD2-210ENST00000584400 NDUFS5O43920 106 aa13.62□□□□□ -0.23
SMARCD2-210ENST00000584400 F8W1H4 67 aa13.61□□□□□ -0.23
SMARCD2-210ENST00000584400 KRTAP9-6A0A140TA67 174 aa13.59□□□□□ -0.23
SMARCD2-210ENST00000584400 LINC00846Q9NV44 126 aa13.57□□□□□ -0.24
SMARCD2-210ENST00000584400 CASC2Q6XLA1 102 aa13.53□□□□□ -0.24
SMARCD2-210ENST00000584400 Q8N9L7 120 aa13.53□□□□□ -0.24
SMARCD2-210ENST00000584400 WFDC13Q8IUB5 93 aa13.51□□□□□ -0.25
SMARCD2-210ENST00000584400 ETDBQ3ZM63 59 aa13.46□□□□□ -0.25
SMARCD2-210ENST00000584400 HCG22E2RYF7 251 aa13.42□□□□□ -0.26
SMARCD2-210ENST00000584400 KRTAP9-8Q9BYQ0 159 aa13.4□□□□□ -0.26
SMARCD2-210ENST00000584400 CXCL6P80162 114 aa13.38□□□□□ -0.27
SMARCD2-210ENST00000584400 CRCT1Q9UGL9 99 aa13.37□□□□□ -0.27
SMARCD2-210ENST00000584400 C7orf65Q6ZTY9 151 aa13.36□□□□□ -0.27
SMARCD2-210ENST00000584400 Q5W150 140 aa13.35□□□□□ -0.27
SMARCD2-210ENST00000584400 IGKV2D-30A0A075B6S6 120 aa13.34□□□□□ -0.27
SMARCD2-210ENST00000584400 IGKV2-30P06310 120 aa13.34□□□□□ -0.27
SMARCD2-210ENST00000584400 ACYP1P07311 99 aa13.26□□□□□ -0.29
SMARCD2-210ENST00000584400 FSIP2Q5CZC0 6907 aa13.24□□□□□ -0.29
SMARCD2-210ENST00000584400 MT2AP02795 61 aa13.23□□□□□ -0.29
SMARCD2-210ENST00000584400 H1FX-AS1Q4G0G2 97 aa13.22□□□□□ -0.29
SMARCD2-210ENST00000584400 TP53AIP1Q9HCN2 124 aa13.21□□□□□ -0.29
SMARCD2-210ENST00000584400 FAM240AA0A1B0GVK7 77 aa13.16□□□□□ -0.3
SMARCD2-210ENST00000584400 KRTAP10-10P60014 251 aa13.15□□□□□ -0.3
SMARCD2-210ENST00000584400 MT1FP04733 61 aa13.12□□□□□ -0.31
SMARCD2-210ENST00000584400 ATP5EP2Q5VTU8 51 aa13.1□□□□□ -0.31
SMARCD2-210ENST00000584400 C4orf26Q17RF5 130 aa13.07□□□□□ -0.32
SMARCD2-210ENST00000584400 HIST1H4AP62805 103 aaKnown RBP12.97□□□□□ -0.33
SMARCD2-210ENST00000584400 KRTAP9-3Q9BYQ3 159 aa12.97□□□□□ -0.33
SMARCD2-210ENST00000584400 A0A1B0GV90 55 aa12.94□□□□□ -0.34
SMARCD2-210ENST00000584400 LINC00643Q86TS7 51 aa12.91□□□□□ -0.34
SMARCD2-210ENST00000584400 TRAV22A0A0B4J277 110 aa12.89□□□□□ -0.35
SMARCD2-210ENST00000584400 C1orf64Q8NEQ6 169 aa12.89□□□□□ -0.35
SMARCD2-210ENST00000584400 LCE2BO14633 110 aa12.84□□□□□ -0.35
SMARCD2-210ENST00000584400 CYP4F30PQ9H0H9 118 aa12.84□□□□□ -0.35
SMARCD2-210ENST00000584400 LOC101927531A0A1B0GV80 90 aa12.83□□□□□ -0.36
SMARCD2-210ENST00000584400 UQCRQO14949 82 aa12.82□□□□□ -0.36
SMARCD2-210ENST00000584400 KRTAP3-1Q9BYR8 98 aa12.81□□□□□ -0.36
SMARCD2-210ENST00000584400 S4R3F8 94 aa12.8□□□□□ -0.36
SMARCD2-210ENST00000584400 J3QR89 54 aa12.78□□□□□ -0.36
SMARCD2-210ENST00000584400 ATOX1O00244 68 aa12.77□□□□□ -0.37
SMARCD2-210ENST00000584400 USH2AO75445 5202 aa12.75□□□□□ -0.37
SMARCD2-210ENST00000584400 C5orf47Q569G3 176 aa12.74□□□□□ -0.37
SMARCD2-210ENST00000584400 A0A087WVE0 104 aa12.73□□□□□ -0.37
SMARCD2-210ENST00000584400 CSAG1Q6PB30 78 aa12.72□□□□□ -0.37
SMARCD2-210ENST00000584400 H0Y9P7 68 aa12.7□□□□□ -0.38
SMARCD2-210ENST00000584400 LCA10Q71F78 164 aa12.67□□□□□ -0.38
SMARCD2-210ENST00000584400 FAM236AA0A1B0GUQ0 79 aa12.59□□□□□ -0.39
SMARCD2-210ENST00000584400 FAM236BA0A1B0GV22 79 aa12.59□□□□□ -0.39
SMARCD2-210ENST00000584400 KRTAP19-1Q8IUB9 90 aa12.58□□□□□ -0.4
SMARCD2-210ENST00000584400 SSPOA2VEC9 5147 aa12.57□□□□□ -0.4
SMARCD2-210ENST00000584400 MP68P56378 58 aa12.55□□□□□ -0.4
SMARCD2-210ENST00000584400 LINC00208Q96KT6 92 aa12.52□□□□□ -0.41
SMARCD2-210ENST00000584400 OCR1Q9BZK8 76 aa12.52□□□□□ -0.41
SMARCD2-210ENST00000584400 A8MUN3 132 aa12.46□□□□□ -0.41
SMARCD2-210ENST00000584400 KRTAP3-3Q9BYR6 98 aa12.46□□□□□ -0.41
SMARCD2-210ENST00000584400 SCGB1A1P11684 91 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms