RNA–Protein interactions for RNA: ENST00000584095.1

TTC39C-208, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 553 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-208ENST00000584095 SPINK1P00995 79 aa2.05□□□□□ -2.08
TTC39C-208ENST00000584095 PLAC4Q8WY50 150 aa2.05□□□□□ -2.08
TTC39C-208ENST00000584095 CHD6Q8TD26 2715 aa2.05□□□□□ -2.08
TTC39C-208ENST00000584095 TACC2O95359 2948 aa2.05□□□□□ -2.08
TTC39C-208ENST00000584095 ABCA2Q9BZC7 2435 aa2.05□□□□□ -2.08
TTC39C-208ENST00000584095 WDFY4Q6ZS81 3184 aa2.04□□□□□ -2.08
TTC39C-208ENST00000584095 DEFB4AO15263 64 aa2.04□□□□□ -2.08
TTC39C-208ENST00000584095 TENM2Q9NT68 2774 aa2.03□□□□□ -2.09
TTC39C-208ENST00000584095 TLN1Q9Y490 2541 aaKnown RBP2.02□□□□□ -2.09
TTC39C-208ENST00000584095 SPINK6Q6UWN8 80 aa2.02□□□□□ -2.09
TTC39C-208ENST00000584095 FLG2Q5D862 2391 aaPredicted RBP2.02□□□□□ -2.09
TTC39C-208ENST00000584095 LAMA1P25391 3075 aa2.01□□□□□ -2.09
TTC39C-208ENST00000584095 TLN2Q9Y4G6 2542 aa2.01□□□□□ -2.09
TTC39C-208ENST00000584095 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
TTC39C-208ENST00000584095 DMDP11532 3685 aa2□□□□□ -2.09
TTC39C-208ENST00000584095 FREM2Q5SZK8 3169 aa2□□□□□ -2.09
TTC39C-208ENST00000584095 WDFY3Q8IZQ1 3526 aa1.99□□□□□ -2.09
TTC39C-208ENST00000584095 BRCA2P51587 3418 aa1.99□□□□□ -2.09
TTC39C-208ENST00000584095 DMXL2Q8TDJ6 3036 aa1.99□□□□□ -2.09
TTC39C-208ENST00000584095 VCANP13611 3396 aa1.98□□□□□ -2.09
TTC39C-208ENST00000584095 CDH23Q9H251 3354 aa1.98□□□□□ -2.09
TTC39C-208ENST00000584095 F8P00451 2351 aa1.98□□□□□ -2.09
TTC39C-208ENST00000584095 LAMA3Q16787 3333 aa1.97□□□□□ -2.09
TTC39C-208ENST00000584095 ZFHX4Q86UP3 3567 aa1.97□□□□□ -2.09
TTC39C-208ENST00000584095 DEFB123Q8N688 67 aa1.97□□□□□ -2.09
TTC39C-208ENST00000584095 APCP25054 2843 aa1.97□□□□□ -2.09
TTC39C-208ENST00000584095 SONP18583 2426 aaKnown RBP1.97□□□□□ -2.09
TTC39C-208ENST00000584095 ASH1LQ9NR48 2969 aaKnown RBP1.96□□□□□ -2.1
TTC39C-208ENST00000584095 INE1O15225 51 aa1.96□□□□□ -2.1
TTC39C-208ENST00000584095 C10orf95Q9H7T3 257 aa1.96□□□□□ -2.1
TTC39C-208ENST00000584095 S4R3F8 94 aa1.96□□□□□ -2.1
TTC39C-208ENST00000584095 PTPN13Q12923 2485 aa1.96□□□□□ -2.1
TTC39C-208ENST00000584095 NAV2Q8IVL1 2488 aa1.96□□□□□ -2.1
TTC39C-208ENST00000584095 OTOGQ6ZRI0 2925 aa1.96□□□□□ -2.1
TTC39C-208ENST00000584095 LRBAP50851 2863 aa1.96□□□□□ -2.1
TTC39C-208ENST00000584095 DCHS1Q96JQ0 3298 aa1.95□□□□□ -2.1
TTC39C-208ENST00000584095 ZFYVE26Q68DK2 2539 aa1.95□□□□□ -2.1
TTC39C-208ENST00000584095 REV3LO60673 3130 aa1.95□□□□□ -2.1
TTC39C-208ENST00000584095 KRTAP21-3Q3LHN1 58 aa1.95□□□□□ -2.1
TTC39C-208ENST00000584095 UBE2DNLQ8IWF7 75 aa1.95□□□□□ -2.1
TTC39C-208ENST00000584095 APLNQ9ULZ1 77 aa1.95□□□□□ -2.1
TTC39C-208ENST00000584095 MYO9AB2RTY4 2548 aa1.95□□□□□ -2.1
TTC39C-208ENST00000584095 JMJD1CQ15652 2540 aa1.95□□□□□ -2.1
TTC39C-208ENST00000584095 HIVEP3Q5T1R4 2406 aa1.95□□□□□ -2.1
TTC39C-208ENST00000584095 OTOGLQ3ZCN5 2332 aa1.94□□□□□ -2.1
TTC39C-208ENST00000584095 CELSR2Q9HCU4 2923 aa1.94□□□□□ -2.1
TTC39C-208ENST00000584095 UBR5O95071 2799 aaPredicted RBP1.94□□□□□ -2.1
TTC39C-208ENST00000584095 CSMD1Q96PZ7 3565 aa1.94□□□□□ -2.1
TTC39C-208ENST00000584095 HMCN1Q96RW7 5635 aa1.93□□□□□ -2.1
TTC39C-208ENST00000584095 SPENQ96T58 3664 aaKnown RBP1.93□□□□□ -2.1
TTC39C-208ENST00000584095 RPS29P62273 56 aaKnown RBP1.93□□□□□ -2.1
TTC39C-208ENST00000584095 HRNRQ86YZ3 2850 aaPredicted RBP1.93□□□□□ -2.1
TTC39C-208ENST00000584095 SMG1Q96Q15 3661 aaKnown RBP1.93□□□□□ -2.1
TTC39C-208ENST00000584095 SETXQ7Z333 2677 aaKnown RBP1.93□□□□□ -2.1
TTC39C-208ENST00000584095 BOD1L1Q8NFC6 3051 aa1.92□□□□□ -2.1
TTC39C-208ENST00000584095 ZNF462Q96JM2 2506 aa1.92□□□□□ -2.1
TTC39C-208ENST00000584095 NF1P21359 2839 aa1.92□□□□□ -2.1
TTC39C-208ENST00000584095 M0QZ58 72 aa1.92□□□□□ -2.1
TTC39C-208ENST00000584095 CEP295Q9C0D2 2601 aa1.92□□□□□ -2.1
TTC39C-208ENST00000584095 ANKRD11Q6UB99 2663 aaPredicted RBP1.92□□□□□ -2.1
TTC39C-208ENST00000584095 ADGRG4Q8IZF6 3080 aa1.92□□□□□ -2.1
TTC39C-208ENST00000584095 SPEGQ15772 3267 aa1.92□□□□□ -2.1
TTC39C-208ENST00000584095 DMXL1Q9Y485 3027 aa1.91□□□□□ -2.1
TTC39C-208ENST00000584095 UTP20O75691 2785 aaKnown RBP1.91□□□□□ -2.1
TTC39C-208ENST00000584095 TEX15Q9BXT5 2789 aa1.91□□□□□ -2.1
TTC39C-208ENST00000584095 DCHS2Q6V1P9 2916 aa1.91□□□□□ -2.1
TTC39C-208ENST00000584095 COL12A1Q99715 3063 aa1.91□□□□□ -2.1
TTC39C-208ENST00000584095 USP9XQ93008 2570 aaPredicted RBP1.91□□□□□ -2.1
TTC39C-208ENST00000584095 CELSR3Q9NYQ7 3312 aa1.91□□□□□ -2.1
TTC39C-208ENST00000584095 A0A0D9SG42 100 aa1.9□□□□□ -2.11
TTC39C-208ENST00000584095 MTORP42345 2549 aa1.9□□□□□ -2.11
TTC39C-208ENST00000584095 MUC6Q6W4X9 2439 aa1.9□□□□□ -2.11
TTC39C-208ENST00000584095 DOPEY1Q5JWR5 2465 aa1.9□□□□□ -2.11
TTC39C-208ENST00000584095 GCN1Q92616 2671 aaKnown RBP1.88□□□□□ -2.11
TTC39C-208ENST00000584095 CELSR1Q9NYQ6 3014 aa1.88□□□□□ -2.11
TTC39C-208ENST00000584095 NBEAL2Q6ZNJ1 2754 aa1.87□□□□□ -2.11
TTC39C-208ENST00000584095 UNC79Q9P2D8 2635 aa1.87□□□□□ -2.11
TTC39C-208ENST00000584095 USP9YO00507 2555 aaPredicted RBP1.86□□□□□ -2.11
TTC39C-208ENST00000584095 ATMQ13315 3056 aa1.86□□□□□ -2.11
TTC39C-208ENST00000584095 NBPF19A0A087WUL8 3843 aa1.86□□□□□ -2.11
TTC39C-208ENST00000584095 AKAP9Q99996 3911 aa1.86□□□□□ -2.11
TTC39C-208ENST00000584095 CENPEQ02224 2701 aa1.86□□□□□ -2.11
TTC39C-208ENST00000584095 MYO15AQ9UKN7 3530 aa1.86□□□□□ -2.11
TTC39C-208ENST00000584095 CCDC168Q8NDH2 2452 aa1.85□□□□□ -2.11
TTC39C-208ENST00000584095 ACANP16112 2415 aa1.85□□□□□ -2.11
TTC39C-208ENST00000584095 HELZ2Q9BYK8 2649 aaKnown RBP1.85□□□□□ -2.11
TTC39C-208ENST00000584095 PKD1L2Q7Z442 2459 aa1.85□□□□□ -2.11
TTC39C-208ENST00000584095 CHD8Q9HCK8 2581 aa1.85□□□□□ -2.11
TTC39C-208ENST00000584095 MXRA5Q9NR99 2828 aa1.84□□□□□ -2.12
TTC39C-208ENST00000584095 PIEZO1Q92508 2521 aa1.83□□□□□ -2.12
TTC39C-208ENST00000584095 LOC400499M0QZD8 3231 aa1.83□□□□□ -2.12
TTC39C-208ENST00000584095 SRRM2Q9UQ35 2752 aaKnown RBP1.83□□□□□ -2.12
TTC39C-208ENST00000584095 LAMA5O15230 3695 aa1.82□□□□□ -2.12
TTC39C-208ENST00000584095 FAM208BQ5VWN6 2430 aa1.82□□□□□ -2.12
TTC39C-208ENST00000584095 EPG5Q9HCE0 2579 aa1.82□□□□□ -2.12
TTC39C-208ENST00000584095 ACACBO00763 2458 aa1.81□□□□□ -2.12
TTC39C-208ENST00000584095 CRYBG3Q68DQ2 2970 aa1.81□□□□□ -2.12
TTC39C-208ENST00000584095 LRRK2Q5S007 2527 aa1.81□□□□□ -2.12
TTC39C-208ENST00000584095 TTC28Q96AY4 2481 aa1.81□□□□□ -2.12
TTC39C-208ENST00000584095 COL6A5A8TX70 2615 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms