RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 IGLV7-46A0A075B6I9 117 aa9.31□□□□□ -0.92
CDK5RAP3-230ENST00000584042 K7EQZ3 153 aa9.31□□□□□ -0.92
CDK5RAP3-230ENST00000584042 PRR15Q8IV56 129 aa9.31□□□□□ -0.92
CDK5RAP3-230ENST00000584042 PRR4Q16378 134 aa9.3□□□□□ -0.92
CDK5RAP3-230ENST00000584042 C8orf87E5RJ46 101 aa9.28□□□□□ -0.92
CDK5RAP3-230ENST00000584042 HERC1Q15751 4861 aa9.28□□□□□ -0.92
CDK5RAP3-230ENST00000584042 IGHV6-1A0A0B4J1U7 121 aa9.27□□□□□ -0.93
CDK5RAP3-230ENST00000584042 Q8N9L7 120 aa9.27□□□□□ -0.93
CDK5RAP3-230ENST00000584042 TPRXLQ17RH7 258 aa9.24□□□□□ -0.93
CDK5RAP3-230ENST00000584042 MT-ATP8P03928 68 aa9.23□□□□□ -0.93
CDK5RAP3-230ENST00000584042 KRTAP13-3Q3SY46 172 aa9.23□□□□□ -0.93
CDK5RAP3-230ENST00000584042 C8orf17Q9NRJ1 99 aa9.23□□□□□ -0.93
CDK5RAP3-230ENST00000584042 MMP24-AS1A0A0U1RRL7 71 aa9.22□□□□□ -0.93
CDK5RAP3-230ENST00000584042 LINC00313P59037 77 aa9.21□□□□□ -0.94
CDK5RAP3-230ENST00000584042 IMUPQ9GZP8 106 aa9.21□□□□□ -0.94
CDK5RAP3-230ENST00000584042 HIST1H4AP62805 103 aaKnown RBP9.2□□□□□ -0.94
CDK5RAP3-230ENST00000584042 HMCN2Q8NDA2 5059 aa9.19□□□□□ -0.94
CDK5RAP3-230ENST00000584042 NOTCH2NLQ7Z3S9 236 aa9.19□□□□□ -0.94
CDK5RAP3-230ENST00000584042 C9orf92A6NGG3 77 aa9.18□□□□□ -0.94
CDK5RAP3-230ENST00000584042 HCG22E2RYF7 251 aa9.18□□□□□ -0.94
CDK5RAP3-230ENST00000584042 KRTAP16-1A8MUX0 517 aa9.17□□□□□ -0.94
CDK5RAP3-230ENST00000584042 A0A087WVE0 104 aa9.15□□□□□ -0.94
CDK5RAP3-230ENST00000584042 hDV103S1A0JD37 113 aa9.15□□□□□ -0.94
CDK5RAP3-230ENST00000584042 TMEM254Q8TBM7 123 aa9.15□□□□□ -0.94
CDK5RAP3-230ENST00000584042 CASC2Q6XLA1 102 aa9.14□□□□□ -0.95
CDK5RAP3-230ENST00000584042 WFDC13Q8IUB5 93 aa9.13□□□□□ -0.95
CDK5RAP3-230ENST00000584042 MRPL34Q9BQ48 92 aaKnown RBP9.12□□□□□ -0.95
CDK5RAP3-230ENST00000584042 XP32Q5T750 250 aa9.11□□□□□ -0.95
CDK5RAP3-230ENST00000584042 C20orf166-AS1Q96NR2 134 aa9.1□□□□□ -0.95
CDK5RAP3-230ENST00000584042 LPAP08519 4548 aa9.09□□□□□ -0.95
CDK5RAP3-230ENST00000584042 Q8N9P0 234 aaPredicted RBP9.08□□□□□ -0.96
CDK5RAP3-230ENST00000584042 A8MUU9 505 aa9.07□□□□□ -0.96
CDK5RAP3-230ENST00000584042 Q75L30 129 aa9.07□□□□□ -0.96
CDK5RAP3-230ENST00000584042 RPL37P61927 97 aaKnown RBP9.04□□□□□ -0.96
CDK5RAP3-230ENST00000584042 FAM236AA0A1B0GUQ0 79 aa9.02□□□□□ -0.97
CDK5RAP3-230ENST00000584042 FAM236BA0A1B0GV22 79 aa9.02□□□□□ -0.97
CDK5RAP3-230ENST00000584042 LRP2P98164 4655 aa9.01□□□□□ -0.97
CDK5RAP3-230ENST00000584042 NDUFS5O43920 106 aa8.99□□□□□ -0.97
CDK5RAP3-230ENST00000584042 TP53AIP1Q9HCN2 124 aa8.97□□□□□ -0.97
CDK5RAP3-230ENST00000584042 SCGB1A1P11684 91 aa8.95□□□□□ -0.98
CDK5RAP3-230ENST00000584042 MUC17Q685J3 4493 aa8.95□□□□□ -0.98
CDK5RAP3-230ENST00000584042 ZCCHC13Q8WW36 166 aaKnown RBP8.93□□□□□ -0.98
CDK5RAP3-230ENST00000584042 OCR1Q9BZK8 76 aa8.93□□□□□ -0.98
CDK5RAP3-230ENST00000584042 ATOX1O00244 68 aa8.92□□□□□ -0.98
CDK5RAP3-230ENST00000584042 SEC61BP60468 96 aaKnown RBP8.91□□□□□ -0.98
CDK5RAP3-230ENST00000584042 ATP11AUNQ6ZP68 121 aa8.91□□□□□ -0.98
CDK5RAP3-230ENST00000584042 SMIM20Q8N5G0 67 aa8.91□□□□□ -0.98
CDK5RAP3-230ENST00000584042 UQCRQO14949 82 aa8.9□□□□□ -0.98
CDK5RAP3-230ENST00000584042 PCOTHQ58A44 107 aa8.86□□□□□ -0.99
CDK5RAP3-230ENST00000584042 TRAV22A0A0B4J277 110 aa8.85□□□□□ -0.99
CDK5RAP3-230ENST00000584042 Q5W150 140 aa8.85□□□□□ -0.99
CDK5RAP3-230ENST00000584042 TRAV7A0A075B6U4 112 aa8.84□□□□□ -0.99
CDK5RAP3-230ENST00000584042 H0Y9P7 68 aa8.79□□□□□ -1
CDK5RAP3-230ENST00000584042 C5orf47Q569G3 176 aa8.79□□□□□ -1
CDK5RAP3-230ENST00000584042 SERP2Q8N6R1 65 aa8.79□□□□□ -1
CDK5RAP3-230ENST00000584042 MP68P56378 58 aa8.77□□□□□ -1.01
CDK5RAP3-230ENST00000584042 H3BPC8 53 aa8.75□□□□□ -1.01
CDK5RAP3-230ENST00000584042 C7orf65Q6ZTY9 151 aa8.74□□□□□ -1.01
CDK5RAP3-230ENST00000584042 LOC101927531A0A1B0GV80 90 aa8.73□□□□□ -1.01
CDK5RAP3-230ENST00000584042 IGKV2-30P06310 120 aa8.73□□□□□ -1.01
CDK5RAP3-230ENST00000584042 ANAPC13Q9BS18 74 aa8.73□□□□□ -1.01
CDK5RAP3-230ENST00000584042 IGKV2D-30A0A075B6S6 120 aa8.7□□□□□ -1.02
CDK5RAP3-230ENST00000584042 COX7CP15954 63 aa8.7□□□□□ -1.02
CDK5RAP3-230ENST00000584042 SPINK7P58062 85 aa8.7□□□□□ -1.02
CDK5RAP3-230ENST00000584042 LINC00208Q96KT6 92 aa8.69□□□□□ -1.02
CDK5RAP3-230ENST00000584042 UBR4Q5T4S7 5183 aa8.68□□□□□ -1.02
CDK5RAP3-230ENST00000584042 C1orf64Q8NEQ6 169 aa8.68□□□□□ -1.02
CDK5RAP3-230ENST00000584042 KRTAP4-1Q9BYQ7 146 aa8.67□□□□□ -1.02
CDK5RAP3-230ENST00000584042 A0A0U1RQV1 116 aa8.65□□□□□ -1.02
CDK5RAP3-230ENST00000584042 CYP4F30PQ9H0H9 118 aa8.65□□□□□ -1.02
CDK5RAP3-230ENST00000584042 C20orf197Q8N268 126 aa8.62□□□□□ -1.03
CDK5RAP3-230ENST00000584042 HRES1P13985 223 aa8.61□□□□□ -1.03
CDK5RAP3-230ENST00000584042 RNF213Q63HN8 5207 aa8.61□□□□□ -1.03
CDK5RAP3-230ENST00000584042 KLKP1Q107X0 134 aa8.6□□□□□ -1.03
CDK5RAP3-230ENST00000584042 SNURFQ9Y675 71 aa8.58□□□□□ -1.04
CDK5RAP3-230ENST00000584042 MPLKIPQ8TAP9 179 aa8.55□□□□□ -1.04
CDK5RAP3-230ENST00000584042 CCDC179H3BU77 68 aa8.51□□□□□ -1.05
CDK5RAP3-230ENST00000584042 RBM12B-AS1Q9P1G2 102 aa8.51□□□□□ -1.05
CDK5RAP3-230ENST00000584042 NDUFC1O43677 76 aa8.49□□□□□ -1.05
CDK5RAP3-230ENST00000584042 MUC2Q02817 5179 aa8.48□□□□□ -1.05
CDK5RAP3-230ENST00000584042 C4orf26Q17RF5 130 aa8.47□□□□□ -1.05
CDK5RAP3-230ENST00000584042 COX6B2Q6YFQ2 88 aa8.46□□□□□ -1.06
CDK5RAP3-230ENST00000584042 CYSTM1Q9H1C7 97 aa8.45□□□□□ -1.06
CDK5RAP3-230ENST00000584042 H7BZZ5 65 aa8.43□□□□□ -1.06
CDK5RAP3-230ENST00000584042 KRTAP19-2Q3LHN2 52 aa8.43□□□□□ -1.06
CDK5RAP3-230ENST00000584042 FAM236DA0A1B0GTK5 79 aa8.42□□□□□ -1.06
CDK5RAP3-230ENST00000584042 FAM236CP0DP71 79 aa8.42□□□□□ -1.06
CDK5RAP3-230ENST00000584042 PCP4P48539 62 aa8.41□□□□□ -1.06
CDK5RAP3-230ENST00000584042 SPANXA2-OT1Q8N9U9 137 aa8.41□□□□□ -1.06
CDK5RAP3-230ENST00000584042 A8MUN3 132 aa8.39□□□□□ -1.07
CDK5RAP3-230ENST00000584042 DMAC1Q96GE9 116 aa8.36□□□□□ -1.07
CDK5RAP3-230ENST00000584042 KRTAP3-1Q9BYR8 98 aa8.36□□□□□ -1.07
CDK5RAP3-230ENST00000584042 FAT4Q6V0I7 4981 aa8.34□□□□□ -1.07
CDK5RAP3-230ENST00000584042 H1FX-AS1Q4G0G2 97 aa8.33□□□□□ -1.08
CDK5RAP3-230ENST00000584042 LCE2CQ5TA81 110 aa8.33□□□□□ -1.08
CDK5RAP3-230ENST00000584042 FLGP20930 4061 aaPredicted RBP8.31□□□□□ -1.08
CDK5RAP3-230ENST00000584042 ATP5EP56381 51 aaPredicted RBP8.28□□□□□ -1.08
CDK5RAP3-230ENST00000584042 TMEM258P61165 79 aa8.28□□□□□ -1.08
CDK5RAP3-230ENST00000584042 ACYP2P14621 99 aa8.24□□□□□ -1.09
CDK5RAP3-230ENST00000584042 S4R3F8 94 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms