RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 IGLV7-46A0A075B6I9 117 aa6.53□□□□□ -1.36
CDRT1-207ENST00000583965 J3KT08 172 aa6.51□□□□□ -1.37
CDRT1-207ENST00000583965 IGKV4-1P06312 121 aa6.5□□□□□ -1.37
CDRT1-207ENST00000583965 DSCR10P59022 87 aa6.5□□□□□ -1.37
CDRT1-207ENST00000583965 HIST1H4AP62805 103 aaKnown RBP6.5□□□□□ -1.37
CDRT1-207ENST00000583965 TPRXLQ17RH7 258 aa6.49□□□□□ -1.37
CDRT1-207ENST00000583965 A8MWP4 228 aa6.47□□□□□ -1.37
CDRT1-207ENST00000583965 DEFB116Q30KQ4 102 aa6.47□□□□□ -1.37
CDRT1-207ENST00000583965 KRTAP13-3Q3SY46 172 aa6.46□□□□□ -1.38
CDRT1-207ENST00000583965 A0A087WVE0 104 aa6.45□□□□□ -1.38
CDRT1-207ENST00000583965 FAM236AA0A1B0GUQ0 79 aa6.45□□□□□ -1.38
CDRT1-207ENST00000583965 FAM236BA0A1B0GV22 79 aa6.45□□□□□ -1.38
CDRT1-207ENST00000583965 HMCN2Q8NDA2 5059 aa6.45□□□□□ -1.38
CDRT1-207ENST00000583965 K7EQZ3 153 aa6.44□□□□□ -1.38
CDRT1-207ENST00000583965 NDUFB1O75438 58 aa6.44□□□□□ -1.38
CDRT1-207ENST00000583965 PRR15Q8IV56 129 aa6.44□□□□□ -1.38
CDRT1-207ENST00000583965 Q8N9L7 120 aa6.43□□□□□ -1.38
CDRT1-207ENST00000583965 A0A1B0GVX0 72 aa6.42□□□□□ -1.38
CDRT1-207ENST00000583965 C9orf92A6NGG3 77 aa6.4□□□□□ -1.38
CDRT1-207ENST00000583965 C8orf87E5RJ46 101 aa6.4□□□□□ -1.38
CDRT1-207ENST00000583965 ATOX1O00244 68 aa6.4□□□□□ -1.38
CDRT1-207ENST00000583965 IGHV6-1A0A0B4J1U7 121 aa6.39□□□□□ -1.39
CDRT1-207ENST00000583965 LINC00313P59037 77 aa6.39□□□□□ -1.39
CDRT1-207ENST00000583965 LPAP08519 4548 aa6.39□□□□□ -1.39
CDRT1-207ENST00000583965 HCG22E2RYF7 251 aa6.38□□□□□ -1.39
CDRT1-207ENST00000583965 LRP2P98164 4655 aa6.37□□□□□ -1.39
CDRT1-207ENST00000583965 XP32Q5T750 250 aa6.36□□□□□ -1.39
CDRT1-207ENST00000583965 SMIM20Q8N5G0 67 aa6.36□□□□□ -1.39
CDRT1-207ENST00000583965 MMP24-AS1A0A0U1RRL7 71 aa6.35□□□□□ -1.39
CDRT1-207ENST00000583965 ANAPC13Q9BS18 74 aa6.35□□□□□ -1.39
CDRT1-207ENST00000583965 C8orf17Q9NRJ1 99 aa6.35□□□□□ -1.39
CDRT1-207ENST00000583965 PCP4P48539 62 aa6.34□□□□□ -1.39
CDRT1-207ENST00000583965 NOTCH2NLQ7Z3S9 236 aa6.34□□□□□ -1.39
CDRT1-207ENST00000583965 KRTAP16-1A8MUX0 517 aa6.32□□□□□ -1.4
CDRT1-207ENST00000583965 CASC2Q6XLA1 102 aa6.32□□□□□ -1.4
CDRT1-207ENST00000583965 SERP2Q8N6R1 65 aa6.32□□□□□ -1.4
CDRT1-207ENST00000583965 TRAV7A0A075B6U4 112 aa6.31□□□□□ -1.4
CDRT1-207ENST00000583965 hDV103S1A0JD37 113 aa6.31□□□□□ -1.4
CDRT1-207ENST00000583965 Q75L30 129 aa6.31□□□□□ -1.4
CDRT1-207ENST00000583965 TMEM254Q8TBM7 123 aa6.31□□□□□ -1.4
CDRT1-207ENST00000583965 C20orf166-AS1Q96NR2 134 aa6.31□□□□□ -1.4
CDRT1-207ENST00000583965 OCR1Q9BZK8 76 aa6.31□□□□□ -1.4
CDRT1-207ENST00000583965 WFDC13Q8IUB5 93 aa6.3□□□□□ -1.4
CDRT1-207ENST00000583965 A8MUU9 505 aa6.29□□□□□ -1.4
CDRT1-207ENST00000583965 RPL37P61927 97 aaKnown RBP6.29□□□□□ -1.4
CDRT1-207ENST00000583965 COX7CP15954 63 aa6.28□□□□□ -1.4
CDRT1-207ENST00000583965 SEC61BP60468 96 aaKnown RBP6.28□□□□□ -1.4
CDRT1-207ENST00000583965 UQCRQO14949 82 aa6.27□□□□□ -1.41
CDRT1-207ENST00000583965 MRPL34Q9BQ48 92 aaKnown RBP6.27□□□□□ -1.41
CDRT1-207ENST00000583965 Q8N9P0 234 aaPredicted RBP6.26□□□□□ -1.41
CDRT1-207ENST00000583965 ATP11AUNQ6ZP68 121 aa6.24□□□□□ -1.41
CDRT1-207ENST00000583965 TP53AIP1Q9HCN2 124 aa6.24□□□□□ -1.41
CDRT1-207ENST00000583965 C5orf47Q569G3 176 aa6.21□□□□□ -1.42
CDRT1-207ENST00000583965 PCOTHQ58A44 107 aa6.21□□□□□ -1.42
CDRT1-207ENST00000583965 CCDC179H3BU77 68 aa6.2□□□□□ -1.42
CDRT1-207ENST00000583965 NDUFS5O43920 106 aa6.19□□□□□ -1.42
CDRT1-207ENST00000583965 MUC17Q685J3 4493 aa6.19□□□□□ -1.42
CDRT1-207ENST00000583965 ZCCHC13Q8WW36 166 aaKnown RBP6.18□□□□□ -1.42
CDRT1-207ENST00000583965 UBR4Q5T4S7 5183 aa6.17□□□□□ -1.42
CDRT1-207ENST00000583965 H3BPC8 53 aa6.17□□□□□ -1.42
CDRT1-207ENST00000583965 KLKP1Q107X0 134 aa6.17□□□□□ -1.42
CDRT1-207ENST00000583965 TRAV22A0A0B4J277 110 aa6.15□□□□□ -1.42
CDRT1-207ENST00000583965 A0A0U1RQV1 116 aa6.15□□□□□ -1.42
CDRT1-207ENST00000583965 C20orf197Q8N268 126 aa6.15□□□□□ -1.42
CDRT1-207ENST00000583965 MP68P56378 58 aa6.14□□□□□ -1.43
CDRT1-207ENST00000583965 H0Y9P7 68 aa6.13□□□□□ -1.43
CDRT1-207ENST00000583965 RNF213Q63HN8 5207 aa6.11□□□□□ -1.43
CDRT1-207ENST00000583965 NDUFC1O43677 76 aa6.11□□□□□ -1.43
CDRT1-207ENST00000583965 KRTAP4-1Q9BYQ7 146 aa6.1□□□□□ -1.43
CDRT1-207ENST00000583965 Q5W150 140 aa6.09□□□□□ -1.43
CDRT1-207ENST00000583965 SNURFQ9Y675 71 aa6.09□□□□□ -1.43
CDRT1-207ENST00000583965 LINC00208Q96KT6 92 aa6.08□□□□□ -1.44
CDRT1-207ENST00000583965 CYSTM1Q9H1C7 97 aa6.08□□□□□ -1.44
CDRT1-207ENST00000583965 C1orf64Q8NEQ6 169 aa6.07□□□□□ -1.44
CDRT1-207ENST00000583965 LOC101927531A0A1B0GV80 90 aa6.06□□□□□ -1.44
CDRT1-207ENST00000583965 H7BZZ5 65 aa6.06□□□□□ -1.44
CDRT1-207ENST00000583965 MUC2Q02817 5179 aa6.04□□□□□ -1.44
CDRT1-207ENST00000583965 SPINK7P58062 85 aa6.04□□□□□ -1.44
CDRT1-207ENST00000583965 TMEM258P61165 79 aa6.03□□□□□ -1.44
CDRT1-207ENST00000583965 IGKV2-30P06310 120 aa6.02□□□□□ -1.45
CDRT1-207ENST00000583965 C7orf65Q6ZTY9 151 aa6.02□□□□□ -1.45
CDRT1-207ENST00000583965 CYP4F30PQ9H0H9 118 aa6.01□□□□□ -1.45
CDRT1-207ENST00000583965 IGKV2D-30A0A075B6S6 120 aa6□□□□□ -1.45
CDRT1-207ENST00000583965 HRES1P13985 223 aa5.98□□□□□ -1.45
CDRT1-207ENST00000583965 ATP5EP56381 51 aaPredicted RBP5.98□□□□□ -1.45
CDRT1-207ENST00000583965 SPANXA2-OT1Q8N9U9 137 aa5.98□□□□□ -1.45
CDRT1-207ENST00000583965 RBM12B-AS1Q9P1G2 102 aa5.96□□□□□ -1.46
CDRT1-207ENST00000583965 FAM236DA0A1B0GTK5 79 aa5.95□□□□□ -1.46
CDRT1-207ENST00000583965 FAM236CP0DP71 79 aa5.95□□□□□ -1.46
CDRT1-207ENST00000583965 MPLKIPQ8TAP9 179 aa5.95□□□□□ -1.46
CDRT1-207ENST00000583965 KRTAP19-2Q3LHN2 52 aa5.92□□□□□ -1.46
CDRT1-207ENST00000583965 COX6B2Q6YFQ2 88 aa5.91□□□□□ -1.46
CDRT1-207ENST00000583965 LCE2CQ5TA81 110 aa5.87□□□□□ -1.47
CDRT1-207ENST00000583965 FAT4Q6V0I7 4981 aa5.86□□□□□ -1.47
CDRT1-207ENST00000583965 C4orf26Q17RF5 130 aa5.85□□□□□ -1.47
CDRT1-207ENST00000583965 FLGP20930 4061 aaPredicted RBP5.84□□□□□ -1.47
CDRT1-207ENST00000583965 RPS28P62857 69 aaKnown RBP5.84□□□□□ -1.47
CDRT1-207ENST00000583965 SERP1Q9Y6X1 66 aa5.84□□□□□ -1.47
CDRT1-207ENST00000583965 DMAC1Q96GE9 116 aa5.83□□□□□ -1.48
CDRT1-207ENST00000583965 A8MUN3 132 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms