RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 MT-ATP8P03928 68 aa6.47□□□□□ -1.37
NUP85-224ENST00000583948 LORP23490 312 aaPredicted RBP6.47□□□□□ -1.37
NUP85-224ENST00000583948 NREPQ16612 68 aa6.47□□□□□ -1.37
NUP85-224ENST00000583948 ASB16-AS1Q495Z4 193 aa6.47□□□□□ -1.37
NUP85-224ENST00000583948 Q6Q795 121 aa6.47□□□□□ -1.37
NUP85-224ENST00000583948 SSPOA2VEC9 5147 aa6.46□□□□□ -1.38
NUP85-224ENST00000583948 IGKV3D-7A0A0C4DH55 119 aa6.46□□□□□ -1.38
NUP85-224ENST00000583948 TRBV7-7A0A0K0K1E9 115 aa6.46□□□□□ -1.38
NUP85-224ENST00000583948 LINC00304Q8N9R0 145 aa6.46□□□□□ -1.38
NUP85-224ENST00000583948 SIGMAR1Q99720 223 aa6.46□□□□□ -1.38
NUP85-224ENST00000583948 KRTAP10-6P60371 365 aaPredicted RBP6.45□□□□□ -1.38
NUP85-224ENST00000583948 ATP5EP2Q5VTU8 51 aa6.43□□□□□ -1.38
NUP85-224ENST00000583948 USH2AO75445 5202 aa6.43□□□□□ -1.38
NUP85-224ENST00000583948 BPY2O14599 106 aa6.41□□□□□ -1.38
NUP85-224ENST00000583948 CD164Q04900 197 aa6.41□□□□□ -1.38
NUP85-224ENST00000583948 KRTAP13-3Q3SY46 172 aa6.41□□□□□ -1.38
NUP85-224ENST00000583948 SS18L2Q9UHA2 77 aa6.41□□□□□ -1.38
NUP85-224ENST00000583948 DEFB116Q30KQ4 102 aa6.39□□□□□ -1.39
NUP85-224ENST00000583948 HIST1H4AP62805 103 aaKnown RBP6.38□□□□□ -1.39
NUP85-224ENST00000583948 CXCL6P80162 114 aa6.38□□□□□ -1.39
NUP85-224ENST00000583948 FCGBPQ9Y6R7 5405 aaPredicted RBP6.36□□□□□ -1.39
NUP85-224ENST00000583948 Q8N9L7 120 aa6.35□□□□□ -1.39
NUP85-224ENST00000583948 LIMD2Q9BT23 127 aa6.35□□□□□ -1.39
NUP85-224ENST00000583948 LINC00472Q9H8W2 130 aa6.35□□□□□ -1.39
NUP85-224ENST00000583948 IGKV4-1P06312 121 aa6.34□□□□□ -1.39
NUP85-224ENST00000583948 SEC61BP60468 96 aaKnown RBP6.34□□□□□ -1.39
NUP85-224ENST00000583948 SPAG11AQ6PDA7 123 aa6.34□□□□□ -1.39
NUP85-224ENST00000583948 IMUPQ9GZP8 106 aa6.34□□□□□ -1.39
NUP85-224ENST00000583948 FLGP20930 4061 aaPredicted RBP6.34□□□□□ -1.39
NUP85-224ENST00000583948 A0A087WVE0 104 aa6.33□□□□□ -1.4
NUP85-224ENST00000583948 J3KT08 172 aa6.33□□□□□ -1.4
NUP85-224ENST00000583948 SPINK1P00995 79 aa6.33□□□□□ -1.4
NUP85-224ENST00000583948 Q96NJ1 140 aa6.33□□□□□ -1.4
NUP85-224ENST00000583948 SYNE2Q8WXH0 6885 aaKnown RBP6.33□□□□□ -1.4
NUP85-224ENST00000583948 DSCR10P59022 87 aa6.32□□□□□ -1.4
NUP85-224ENST00000583948 K7EQZ3 153 aa6.31□□□□□ -1.4
NUP85-224ENST00000583948 Q5XG85 94 aa6.3□□□□□ -1.4
NUP85-224ENST00000583948 FAM236AA0A1B0GUQ0 79 aa6.29□□□□□ -1.4
NUP85-224ENST00000583948 FAM236BA0A1B0GV22 79 aa6.29□□□□□ -1.4
NUP85-224ENST00000583948 A8MWP4 228 aa6.29□□□□□ -1.4
NUP85-224ENST00000583948 M0R2T5 61 aa6.29□□□□□ -1.4
NUP85-224ENST00000583948 NDUFB1O75438 58 aa6.28□□□□□ -1.4
NUP85-224ENST00000583948 RPS29P62273 56 aaKnown RBP6.28□□□□□ -1.4
NUP85-224ENST00000583948 C1orf195Q5TG92 126 aa6.28□□□□□ -1.4
NUP85-224ENST00000583948 SCGB1A1P11684 91 aa6.27□□□□□ -1.41
NUP85-224ENST00000583948 PRR15Q8IV56 129 aa6.27□□□□□ -1.41
NUP85-224ENST00000583948 IGHV6-1A0A0B4J1U7 121 aa6.25□□□□□ -1.41
NUP85-224ENST00000583948 A0A1B0GVX0 72 aa6.25□□□□□ -1.41
NUP85-224ENST00000583948 XP32Q5T750 250 aa6.25□□□□□ -1.41
NUP85-224ENST00000583948 FP248Q71RG6 208 aaPredicted RBP6.25□□□□□ -1.41
NUP85-224ENST00000583948 PCOTHQ58A44 107 aa6.24□□□□□ -1.41
NUP85-224ENST00000583948 MACF1Q9UPN3 7388 aaKnown RBP6.23□□□□□ -1.41
NUP85-224ENST00000583948 HCG22E2RYF7 251 aa6.23□□□□□ -1.41
NUP85-224ENST00000583948 WFDC13Q8IUB5 93 aa6.23□□□□□ -1.41
NUP85-224ENST00000583948 C8orf17Q9NRJ1 99 aa6.21□□□□□ -1.42
NUP85-224ENST00000583948 MMP24-AS1A0A0U1RRL7 71 aa6.2□□□□□ -1.42
NUP85-224ENST00000583948 ATOX1O00244 68 aa6.2□□□□□ -1.42
NUP85-224ENST00000583948 CASC2Q6XLA1 102 aa6.2□□□□□ -1.42
NUP85-224ENST00000583948 KRTAP19-1Q8IUB9 90 aa6.18□□□□□ -1.42
NUP85-224ENST00000583948 ANAPC13Q9BS18 74 aa6.18□□□□□ -1.42
NUP85-224ENST00000583948 hDV103S1A0JD37 113 aa6.17□□□□□ -1.42
NUP85-224ENST00000583948 C8orf87E5RJ46 101 aa6.17□□□□□ -1.42
NUP85-224ENST00000583948 NOTCH2NLQ7Z3S9 236 aa6.17□□□□□ -1.42
NUP85-224ENST00000583948 LINC00313P59037 77 aa6.16□□□□□ -1.42
NUP85-224ENST00000583948 TMEM254Q8TBM7 123 aa6.14□□□□□ -1.43
NUP85-224ENST00000583948 NDUFS5O43920 106 aa6.13□□□□□ -1.43
NUP85-224ENST00000583948 PCP4P48539 62 aa6.13□□□□□ -1.43
NUP85-224ENST00000583948 MRPL34Q9BQ48 92 aaKnown RBP6.13□□□□□ -1.43
NUP85-224ENST00000583948 C9orf92A6NGG3 77 aa6.12□□□□□ -1.43
NUP85-224ENST00000583948 SMIM20Q8N5G0 67 aa6.12□□□□□ -1.43
NUP85-224ENST00000583948 TRAV7A0A075B6U4 112 aa6.11□□□□□ -1.43
NUP85-224ENST00000583948 COX6B2Q6YFQ2 88 aa6.11□□□□□ -1.43
NUP85-224ENST00000583948 SERP2Q8N6R1 65 aa6.11□□□□□ -1.43
NUP85-224ENST00000583948 OCR1Q9BZK8 76 aa6.09□□□□□ -1.43
NUP85-224ENST00000583948 KRTAP16-1A8MUX0 517 aa6.07□□□□□ -1.44
NUP85-224ENST00000583948 COX7CP15954 63 aa6.07□□□□□ -1.44
NUP85-224ENST00000583948 KRTAP9-8Q9BYQ0 159 aa6.07□□□□□ -1.44
NUP85-224ENST00000583948 UQCRQO14949 82 aa6.05□□□□□ -1.44
NUP85-224ENST00000583948 CCDC179H3BU77 68 aa6.04□□□□□ -1.44
NUP85-224ENST00000583948 TP53AIP1Q9HCN2 124 aa6.04□□□□□ -1.44
NUP85-224ENST00000583948 H0Y9P7 68 aa6.02□□□□□ -1.45
NUP85-224ENST00000583948 Q8N9P0 234 aaPredicted RBP6.02□□□□□ -1.45
NUP85-224ENST00000583948 C20orf197Q8N268 126 aa6.01□□□□□ -1.45
NUP85-224ENST00000583948 TRAV22A0A0B4J277 110 aa6□□□□□ -1.45
NUP85-224ENST00000583948 MP68P56378 58 aa6□□□□□ -1.45
NUP85-224ENST00000583948 C5orf47Q569G3 176 aa6□□□□□ -1.45
NUP85-224ENST00000583948 SNURFQ9Y675 71 aa5.99□□□□□ -1.45
NUP85-224ENST00000583948 A8MUU9 505 aa5.97□□□□□ -1.45
NUP85-224ENST00000583948 C20orf166-AS1Q96NR2 134 aa5.97□□□□□ -1.45
NUP85-224ENST00000583948 LINC00208Q96KT6 92 aa5.96□□□□□ -1.46
NUP85-224ENST00000583948 Q5W150 140 aa5.95□□□□□ -1.46
NUP85-224ENST00000583948 NEBP20929 6669 aa5.94□□□□□ -1.46
NUP85-224ENST00000583948 Q75L30 129 aa5.94□□□□□ -1.46
NUP85-224ENST00000583948 C1orf64Q8NEQ6 169 aa5.94□□□□□ -1.46
NUP85-224ENST00000583948 ZCCHC13Q8WW36 166 aaKnown RBP5.94□□□□□ -1.46
NUP85-224ENST00000583948 H3BPC8 53 aa5.93□□□□□ -1.46
NUP85-224ENST00000583948 MT2AP02795 61 aa5.93□□□□□ -1.46
NUP85-224ENST00000583948 KLKP1Q107X0 134 aa5.92□□□□□ -1.46
NUP85-224ENST00000583948 CYSTM1Q9H1C7 97 aa5.92□□□□□ -1.46
NUP85-224ENST00000583948 MT1FP04733 61 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms