RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-223ENST00000583877 IMUPQ9GZP8 106 aa4.6□□□□□ -1.67
NUP85-223ENST00000583877 TRACP01848 142 aa4.59□□□□□ -1.67
NUP85-223ENST00000583877 MT-ATP8P03928 68 aa4.59□□□□□ -1.67
NUP85-223ENST00000583877 C1orf195Q5TG92 126 aa4.59□□□□□ -1.67
NUP85-223ENST00000583877 SOSTDC1Q6X4U4 206 aa4.59□□□□□ -1.67
NUP85-223ENST00000583877 ANAPC13Q9BS18 74 aa4.59□□□□□ -1.67
NUP85-223ENST00000583877 FCGBPQ9Y6R7 5405 aaPredicted RBP4.59□□□□□ -1.68
NUP85-223ENST00000583877 IGKV2-30P06310 120 aa4.58□□□□□ -1.68
NUP85-223ENST00000583877 COX7BP24311 80 aa4.58□□□□□ -1.68
NUP85-223ENST00000583877 ADAMTSL4-AS1Q5T5F5 129 aa4.57□□□□□ -1.68
NUP85-223ENST00000583877 TRAV13-2A0A0B4J235 113 aa4.56□□□□□ -1.68
NUP85-223ENST00000583877 A0A0G2JQZ4 141 aa4.56□□□□□ -1.68
NUP85-223ENST00000583877 TRBV7-7A0A0K0K1E9 115 aa4.56□□□□□ -1.68
NUP85-223ENST00000583877 TEX49A0A1B0GTD5 131 aa4.56□□□□□ -1.68
NUP85-223ENST00000583877 LINC00308Q8TCZ7 52 aa4.56□□□□□ -1.68
NUP85-223ENST00000583877 NDUFV3P56181 108 aaKnown RBP4.55□□□□□ -1.68
NUP85-223ENST00000583877 SMIM29Q86T20 159 aa4.55□□□□□ -1.68
NUP85-223ENST00000583877 MACF1Q9UPN3 7388 aaKnown RBP4.55□□□□□ -1.68
NUP85-223ENST00000583877 H0YGX0 51 aa4.54□□□□□ -1.68
NUP85-223ENST00000583877 ELOF1P60002 83 aaKnown RBP4.54□□□□□ -1.68
NUP85-223ENST00000583877 C6orf99Q4VX62 202 aa4.54□□□□□ -1.68
NUP85-223ENST00000583877 KRTAP9-8Q9BYQ0 159 aa4.54□□□□□ -1.68
NUP85-223ENST00000583877 SYNE2Q8WXH0 6885 aaKnown RBP4.53□□□□□ -1.68
NUP85-223ENST00000583877 ATP11AUNQ6ZP68 121 aa4.53□□□□□ -1.68
NUP85-223ENST00000583877 LINC00643Q86TS7 51 aa4.53□□□□□ -1.68
NUP85-223ENST00000583877 A0A1B0GX51 115 aa4.52□□□□□ -1.69
NUP85-223ENST00000583877 KRTAP4-9Q9BYQ8 210 aa4.52□□□□□ -1.69
NUP85-223ENST00000583877 KRTAP4-7Q9BYR0 210 aa4.52□□□□□ -1.69
NUP85-223ENST00000583877 CLEC2BQ92478 149 aa4.51□□□□□ -1.69
NUP85-223ENST00000583877 IGLV5-48A0A075B6I7 105 aa4.49□□□□□ -1.69
NUP85-223ENST00000583877 TRBV7-6A0A0J9YX20 115 aa4.49□□□□□ -1.69
NUP85-223ENST00000583877 F8WEM9 126 aa4.49□□□□□ -1.69
NUP85-223ENST00000583877 DNAL4O96015 105 aa4.49□□□□□ -1.69
NUP85-223ENST00000583877 BAALC-AS2P0C853 105 aa4.49□□□□□ -1.69
NUP85-223ENST00000583877 H3BQ85 93 aa4.48□□□□□ -1.69
NUP85-223ENST00000583877 OBSCN-AS1Q96MR7 158 aa4.48□□□□□ -1.69
NUP85-223ENST00000583877 JMJD7-PLA2G4BH0Y9G9 81 aa4.46□□□□□ -1.7
NUP85-223ENST00000583877 UQCRQO14949 82 aa4.46□□□□□ -1.7
NUP85-223ENST00000583877 ATP5EP2Q5VTU8 51 aa4.46□□□□□ -1.7
NUP85-223ENST00000583877 ATOX1O00244 68 aa4.45□□□□□ -1.7
NUP85-223ENST00000583877 Q6JHZ5 121 aa4.45□□□□□ -1.7
NUP85-223ENST00000583877 Q8N9P0 234 aaPredicted RBP4.45□□□□□ -1.7
NUP85-223ENST00000583877 Q96NJ1 140 aa4.45□□□□□ -1.7
NUP85-223ENST00000583877 MT2AP02795 61 aa4.44□□□□□ -1.7
NUP85-223ENST00000583877 ORMDL1Q9P0S3 153 aa4.44□□□□□ -1.7
NUP85-223ENST00000583877 FAM236AA0A1B0GUQ0 79 aa4.43□□□□□ -1.7
NUP85-223ENST00000583877 FAM236BA0A1B0GV22 79 aa4.43□□□□□ -1.7
NUP85-223ENST00000583877 SMIM11BQ8TCY0 68 aa4.43□□□□□ -1.7
NUP85-223ENST00000583877 FAM236DA0A1B0GTK5 79 aa4.42□□□□□ -1.7
NUP85-223ENST00000583877 CCDC179H3BU77 68 aa4.42□□□□□ -1.7
NUP85-223ENST00000583877 TMEM256-PLSCR3K7ERE1 68 aa4.42□□□□□ -1.7
NUP85-223ENST00000583877 FAM236CP0DP71 79 aa4.42□□□□□ -1.7
NUP85-223ENST00000583877 COX7CP15954 63 aa4.42□□□□□ -1.7
NUP85-223ENST00000583877 HIST1H4AP62805 103 aaKnown RBP4.42□□□□□ -1.7
NUP85-223ENST00000583877 FAM218AQ96MZ4 157 aa4.42□□□□□ -1.7
NUP85-223ENST00000583877 KRTAP4-11Q9BYQ6 195 aa4.42□□□□□ -1.7
NUP85-223ENST00000583877 SS18L2Q9UHA2 77 aa4.42□□□□□ -1.7
NUP85-223ENST00000583877 MT1FP04733 61 aa4.41□□□□□ -1.7
NUP85-223ENST00000583877 CCKP06307 115 aa4.4□□□□□ -1.71
NUP85-223ENST00000583877 PDE6GP18545 87 aa4.4□□□□□ -1.71
NUP85-223ENST00000583877 IGFL1Q6UW32 110 aa4.4□□□□□ -1.71
NUP85-223ENST00000583877 IGKV2D-30A0A075B6S6 120 aa4.39□□□□□ -1.71
NUP85-223ENST00000583877 RPS28P62857 69 aaKnown RBP4.39□□□□□ -1.71
NUP85-223ENST00000583877 C20orf166-AS1Q96NR2 134 aa4.39□□□□□ -1.71
NUP85-223ENST00000583877 hADV29S1A0JD25 119 aa4.38□□□□□ -1.71
NUP85-223ENST00000583877 A8MUU9 505 aa4.38□□□□□ -1.71
NUP85-223ENST00000583877 KRTAP10-10P60014 251 aa4.38□□□□□ -1.71
NUP85-223ENST00000583877 Q6ZQY7 126 aa4.38□□□□□ -1.71
NUP85-223ENST00000583877 SERP2Q8N6R1 65 aa4.38□□□□□ -1.71
NUP85-223ENST00000583877 LINC00846Q9NV44 126 aa4.38□□□□□ -1.71
NUP85-223ENST00000583877 TMEM258P61165 79 aa4.37□□□□□ -1.71
NUP85-223ENST00000583877 LINC00575Q6W349 94 aa4.37□□□□□ -1.71
NUP85-223ENST00000583877 SMIM20Q8N5G0 67 aa4.37□□□□□ -1.71
NUP85-223ENST00000583877 UBL5Q9BZL1 73 aa4.37□□□□□ -1.71
NUP85-223ENST00000583877 LOC110117498A0A087WWA1 95 aa4.36□□□□□ -1.71
NUP85-223ENST00000583877 C14orf132Q9NPU4 83 aa4.36□□□□□ -1.71
NUP85-223ENST00000583877 J3KT08 172 aa4.35□□□□□ -1.71
NUP85-223ENST00000583877 KRTAP19-6Q3LI70 58 aa4.34□□□□□ -1.71
NUP85-223ENST00000583877 RBM12B-AS1Q9P1G2 102 aa4.34□□□□□ -1.71
NUP85-223ENST00000583877 DSCR10P59022 87 aa4.33□□□□□ -1.72
NUP85-223ENST00000583877 RBM3P98179 157 aaKnown RBP4.33□□□□□ -1.72
NUP85-223ENST00000583877 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.33□□□□□ -1.72
NUP85-223ENST00000583877 KRTAP4-2Q9BYR5 136 aa4.33□□□□□ -1.72
NUP85-223ENST00000583877 A0A1B0GW54 56 aa4.31□□□□□ -1.72
NUP85-223ENST00000583877 CXCL6P80162 114 aa4.31□□□□□ -1.72
NUP85-223ENST00000583877 Q6ZQT0 140 aa4.31□□□□□ -1.72
NUP85-223ENST00000583877 DSCR8Q96T75 97 aa4.31□□□□□ -1.72
NUP85-223ENST00000583877 IGKV3D-7A0A0C4DH55 119 aa4.3□□□□□ -1.72
NUP85-223ENST00000583877 KRTAP16-1A8MUX0 517 aa4.3□□□□□ -1.72
NUP85-223ENST00000583877 KRTAP6-3Q3LI67 103 aa4.3□□□□□ -1.72
NUP85-223ENST00000583877 TRAV7A0A075B6U4 112 aa4.29□□□□□ -1.72
NUP85-223ENST00000583877 A0A087WSZ3 146 aa4.29□□□□□ -1.72
NUP85-223ENST00000583877 HRES1P13985 223 aa4.29□□□□□ -1.72
NUP85-223ENST00000583877 NDUFC1O43677 76 aa4.28□□□□□ -1.72
NUP85-223ENST00000583877 LINC00313P59037 77 aa4.28□□□□□ -1.72
NUP85-223ENST00000583877 TRBV7-4A0A0J9YYF1 115 aa4.27□□□□□ -1.73
NUP85-223ENST00000583877 ATP5EP56381 51 aaPredicted RBP4.27□□□□□ -1.73
NUP85-223ENST00000583877 PRAC1Q96KF2 57 aa4.27□□□□□ -1.73
NUP85-223ENST00000583877 NOTCH2NLQ7Z3S9 236 aa4.26□□□□□ -1.73
NUP85-223ENST00000583877 NEBP20929 6669 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms