RNA–Protein interactions for RNA: ENST00000583796.1

IFT20-213, Transcript of intraflagellar transport 20, humanhuman

Gene IFT20, Length 1,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-213ENST00000583796 HCG22E2RYF7 251 aa6□□□□□ -1.45
IFT20-213ENST00000583796 Q96NJ1 140 aa6□□□□□ -1.45
IFT20-213ENST00000583796 PKHD1P08F94 4074 aa5.99□□□□□ -1.45
IFT20-213ENST00000583796 CDK2AP2O75956 126 aa5.99□□□□□ -1.45
IFT20-213ENST00000583796 PLA2G1BP04054 148 aaKnown RBP5.99□□□□□ -1.45
IFT20-213ENST00000583796 KRTAP13-2Q52LG2 175 aa5.99□□□□□ -1.45
IFT20-213ENST00000583796 HRCT1Q6UXD1 115 aa5.98□□□□□ -1.45
IFT20-213ENST00000583796 LIMD2Q9BT23 127 aa5.98□□□□□ -1.45
IFT20-213ENST00000583796 KRTAP9-8Q9BYQ0 159 aa5.98□□□□□ -1.45
IFT20-213ENST00000583796 DYNC1H1Q14204 4646 aaKnown RBP5.98□□□□□ -1.45
IFT20-213ENST00000583796 CCDC179H3BU77 68 aa5.97□□□□□ -1.45
IFT20-213ENST00000583796 KRTAP10-4P60372 401 aaPredicted RBP5.97□□□□□ -1.45
IFT20-213ENST00000583796 RPS29P62273 56 aaKnown RBP5.97□□□□□ -1.45
IFT20-213ENST00000583796 DEFB116Q30KQ4 102 aa5.96□□□□□ -1.45
IFT20-213ENST00000583796 SPINK1P00995 79 aa5.96□□□□□ -1.46
IFT20-213ENST00000583796 OCR1Q9BZK8 76 aa5.96□□□□□ -1.46
IFT20-213ENST00000583796 SMR3BP02814 79 aaPredicted RBP5.95□□□□□ -1.46
IFT20-213ENST00000583796 SPAG11AQ6PDA7 123 aa5.95□□□□□ -1.46
IFT20-213ENST00000583796 TYMSOSQ8TAI1 123 aa5.95□□□□□ -1.46
IFT20-213ENST00000583796 KRTAP29-1A8MX34 341 aaPredicted RBP5.94□□□□□ -1.46
IFT20-213ENST00000583796 A0A1B0GVX0 72 aa5.93□□□□□ -1.46
IFT20-213ENST00000583796 CASC2Q6XLA1 102 aa5.93□□□□□ -1.46
IFT20-213ENST00000583796 APOBP04114 4563 aaKnown RBP5.93□□□□□ -1.46
IFT20-213ENST00000583796 KRTAP9-7A8MTY7 169 aa5.92□□□□□ -1.46
IFT20-213ENST00000583796 KLKP1Q107X0 134 aa5.92□□□□□ -1.46
IFT20-213ENST00000583796 VPS13BQ7Z7G8 4022 aa5.92□□□□□ -1.46
IFT20-213ENST00000583796 MMP24-AS1A0A0U1RRL7 71 aa5.91□□□□□ -1.46
IFT20-213ENST00000583796 hDV103S1A0JD37 113 aa5.9□□□□□ -1.47
IFT20-213ENST00000583796 C8orf87E5RJ46 101 aa5.9□□□□□ -1.47
IFT20-213ENST00000583796 WFDC13Q8IUB5 93 aa5.9□□□□□ -1.47
IFT20-213ENST00000583796 LINC00304Q8N9R0 145 aa5.9□□□□□ -1.47
IFT20-213ENST00000583796 C8orf17Q9NRJ1 99 aa5.9□□□□□ -1.47
IFT20-213ENST00000583796 NDUFC1O43677 76 aa5.89□□□□□ -1.47
IFT20-213ENST00000583796 C5orf47Q569G3 176 aa5.89□□□□□ -1.47
IFT20-213ENST00000583796 C20orf197Q8N268 126 aa5.88□□□□□ -1.47
IFT20-213ENST00000583796 PRR26Q8N8Z3 221 aa5.88□□□□□ -1.47
IFT20-213ENST00000583796 TMEM254Q8TBM7 123 aa5.88□□□□□ -1.47
IFT20-213ENST00000583796 TP53AIP1Q9HCN2 124 aa5.88□□□□□ -1.47
IFT20-213ENST00000583796 IGHV6-1A0A0B4J1U7 121 aa5.87□□□□□ -1.47
IFT20-213ENST00000583796 C1orf195Q5TG92 126 aa5.87□□□□□ -1.47
IFT20-213ENST00000583796 KRTAP4-11Q9BYQ6 195 aa5.87□□□□□ -1.47
IFT20-213ENST00000583796 TMEM258P61165 79 aa5.86□□□□□ -1.47
IFT20-213ENST00000583796 Q5VSD8 79 aa5.86□□□□□ -1.47
IFT20-213ENST00000583796 H3BPC8 53 aa5.85□□□□□ -1.47
IFT20-213ENST00000583796 RYR3Q15413 4870 aa5.85□□□□□ -1.47
IFT20-213ENST00000583796 MRPL34Q9BQ48 92 aaKnown RBP5.84□□□□□ -1.47
IFT20-213ENST00000583796 A0A0U1RQV1 116 aa5.83□□□□□ -1.48
IFT20-213ENST00000583796 MP68P56378 58 aa5.83□□□□□ -1.48
IFT20-213ENST00000583796 LCE5AQ5TCM9 118 aa5.83□□□□□ -1.48
IFT20-213ENST00000583796 FAT1Q14517 4588 aa5.82□□□□□ -1.48
IFT20-213ENST00000583796 LINC00313P59037 77 aa5.81□□□□□ -1.48
IFT20-213ENST00000583796 TRAV22A0A0B4J277 110 aa5.8□□□□□ -1.48
IFT20-213ENST00000583796 H7BZZ5 65 aa5.8□□□□□ -1.48
IFT20-213ENST00000583796 Q8N1X5 172 aa5.8□□□□□ -1.48
IFT20-213ENST00000583796 ZCCHC13Q8WW36 166 aaKnown RBP5.79□□□□□ -1.48
IFT20-213ENST00000583796 CYSTM1Q9H1C7 97 aa5.79□□□□□ -1.48
IFT20-213ENST00000583796 SNURFQ9Y675 71 aa5.79□□□□□ -1.48
IFT20-213ENST00000583796 ATP5EP56381 51 aaPredicted RBP5.78□□□□□ -1.48
IFT20-213ENST00000583796 H0Y9P7 68 aa5.77□□□□□ -1.49
IFT20-213ENST00000583796 NOTCH2NLQ7Z3S9 236 aa5.77□□□□□ -1.49
IFT20-213ENST00000583796 Q8N9P0 234 aaPredicted RBP5.77□□□□□ -1.49
IFT20-213ENST00000583796 KRTAP4-5Q9BYR2 181 aa5.77□□□□□ -1.49
IFT20-213ENST00000583796 NDUFS5O43920 106 aa5.76□□□□□ -1.49
IFT20-213ENST00000583796 KRTAP10-8P60410 259 aa5.76□□□□□ -1.49
IFT20-213ENST00000583796 HSPG2P98160 4391 aa5.75□□□□□ -1.49
IFT20-213ENST00000583796 KRTAP9-3Q9BYQ3 159 aa5.75□□□□□ -1.49
IFT20-213ENST00000583796 RYR1P21817 5038 aa5.74□□□□□ -1.49
IFT20-213ENST00000583796 FAM236DA0A1B0GTK5 79 aa5.74□□□□□ -1.49
IFT20-213ENST00000583796 FAM236CP0DP71 79 aa5.74□□□□□ -1.49
IFT20-213ENST00000583796 KRTAP16-1A8MUX0 517 aa5.73□□□□□ -1.49
IFT20-213ENST00000583796 LINC00208Q96KT6 92 aa5.73□□□□□ -1.49
IFT20-213ENST00000583796 PKHD1L1Q86WI1 4243 aa5.73□□□□□ -1.49
IFT20-213ENST00000583796 C1orf64Q8NEQ6 169 aa5.71□□□□□ -1.49
IFT20-213ENST00000583796 LOC101927531A0A1B0GV80 90 aa5.71□□□□□ -1.5
IFT20-213ENST00000583796 RPS28P62857 69 aaKnown RBP5.71□□□□□ -1.5
IFT20-213ENST00000583796 FP248Q71RG6 208 aaPredicted RBP5.7□□□□□ -1.5
IFT20-213ENST00000583796 SPANXA2-OT1Q8N9U9 137 aa5.7□□□□□ -1.5
IFT20-213ENST00000583796 OXTP01178 125 aa5.69□□□□□ -1.5
IFT20-213ENST00000583796 KRTAP13-3Q3SY46 172 aa5.69□□□□□ -1.5
IFT20-213ENST00000583796 FLG2Q5D862 2391 aaPredicted RBP5.68□□□□□ -1.5
IFT20-213ENST00000583796 KIAA1109Q2LD37 5005 aa5.67□□□□□ -1.5
IFT20-213ENST00000583796 CYP4F30PQ9H0H9 118 aa5.65□□□□□ -1.5
IFT20-213ENST00000583796 SERP1Q9Y6X1 66 aa5.65□□□□□ -1.5
IFT20-213ENST00000583796 Q5W150 140 aa5.64□□□□□ -1.51
IFT20-213ENST00000583796 C20orf166-AS1Q96NR2 134 aa5.64□□□□□ -1.51
IFT20-213ENST00000583796 EPPK1P58107 5090 aaKnown RBP5.63□□□□□ -1.51
IFT20-213ENST00000583796 A8MUU9 505 aa5.63□□□□□ -1.51
IFT20-213ENST00000583796 MT1HL1P0DM35 61 aa5.63□□□□□ -1.51
IFT20-213ENST00000583796 RETNLBQ9BQ08 111 aa5.61□□□□□ -1.51
IFT20-213ENST00000583796 IGLV7-46A0A075B6I9 117 aa5.6□□□□□ -1.51
IFT20-213ENST00000583796 IGKV2-30P06310 120 aa5.6□□□□□ -1.51
IFT20-213ENST00000583796 TNXBP22105 4242 aa5.58□□□□□ -1.52
IFT20-213ENST00000583796 Q75L30 129 aa5.58□□□□□ -1.52
IFT20-213ENST00000583796 LRP1Q07954 4544 aaKnown RBP5.57□□□□□ -1.52
IFT20-213ENST00000583796 C9orf92A6NGG3 77 aa5.57□□□□□ -1.52
IFT20-213ENST00000583796 PCOTHQ58A44 107 aa5.57□□□□□ -1.52
IFT20-213ENST00000583796 FAT3Q8TDW7 4589 aa5.56□□□□□ -1.52
IFT20-213ENST00000583796 C7orf65Q6ZTY9 151 aa5.55□□□□□ -1.52
IFT20-213ENST00000583796 DMBT1Q9UGM3 2413 aaPredicted RBP5.54□□□□□ -1.52
IFT20-213ENST00000583796 SMIM26A0A096LP01 95 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms