RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 J3QR89 54 aa5.11□□□□□ -1.59
UBBP4-201ENST00000583708 LINC00313P59037 77 aa5.11□□□□□ -1.59
UBBP4-201ENST00000583708 SEC61BP60468 96 aaKnown RBP5.11□□□□□ -1.59
UBBP4-201ENST00000583708 BPY2O14599 106 aa5.1□□□□□ -1.59
UBBP4-201ENST00000583708 Q6ZVQ6 151 aa5.1□□□□□ -1.59
UBBP4-201ENST00000583708 LINC00846Q9NV44 126 aa5.1□□□□□ -1.59
UBBP4-201ENST00000583708 DEFB116Q30KQ4 102 aa5.08□□□□□ -1.6
UBBP4-201ENST00000583708 Q75L30 129 aa5.08□□□□□ -1.6
UBBP4-201ENST00000583708 PRR15Q8IV56 129 aa5.08□□□□□ -1.6
UBBP4-201ENST00000583708 C9orf92A6NGG3 77 aa5.07□□□□□ -1.6
UBBP4-201ENST00000583708 CXCL6P80162 114 aa5.07□□□□□ -1.6
UBBP4-201ENST00000583708 LPAP08519 4548 aa5.07□□□□□ -1.6
UBBP4-201ENST00000583708 IGHV6-1A0A0B4J1U7 121 aa5.06□□□□□ -1.6
UBBP4-201ENST00000583708 RPL37P61927 97 aaKnown RBP5.06□□□□□ -1.6
UBBP4-201ENST00000583708 C20orf166-AS1Q96NR2 134 aa5.06□□□□□ -1.6
UBBP4-201ENST00000583708 IGKV3D-7A0A0C4DH55 119 aa5.05□□□□□ -1.6
UBBP4-201ENST00000583708 A8MUU9 505 aa5.05□□□□□ -1.6
UBBP4-201ENST00000583708 DSCR10P59022 87 aa5.05□□□□□ -1.6
UBBP4-201ENST00000583708 ATP5EP2Q5VTU8 51 aa5.05□□□□□ -1.6
UBBP4-201ENST00000583708 ATP11AUNQ6ZP68 121 aa5.03□□□□□ -1.6
UBBP4-201ENST00000583708 C8orf17Q9NRJ1 99 aa5.03□□□□□ -1.6
UBBP4-201ENST00000583708 KRTAP16-1A8MUX0 517 aa5.02□□□□□ -1.61
UBBP4-201ENST00000583708 LINC00643Q86TS7 51 aa5.02□□□□□ -1.61
UBBP4-201ENST00000583708 Q8N9P0 234 aaPredicted RBP5.01□□□□□ -1.61
UBBP4-201ENST00000583708 TMEM254Q8TBM7 123 aa5.01□□□□□ -1.61
UBBP4-201ENST00000583708 MUC17Q685J3 4493 aa5.01□□□□□ -1.61
UBBP4-201ENST00000583708 K7EQZ3 153 aa5□□□□□ -1.61
UBBP4-201ENST00000583708 K7ERU9 68 aa5□□□□□ -1.61
UBBP4-201ENST00000583708 hDV103S1A0JD37 113 aa4.99□□□□□ -1.61
UBBP4-201ENST00000583708 NOTCH2NLQ7Z3S9 236 aa4.99□□□□□ -1.61
UBBP4-201ENST00000583708 MMP24-AS1A0A0U1RRL7 71 aa4.98□□□□□ -1.61
UBBP4-201ENST00000583708 MRPL34Q9BQ48 92 aaKnown RBP4.98□□□□□ -1.61
UBBP4-201ENST00000583708 UBR4Q5T4S7 5183 aa4.97□□□□□ -1.61
UBBP4-201ENST00000583708 PCOTHQ58A44 107 aa4.97□□□□□ -1.61
UBBP4-201ENST00000583708 A0A0U1RQV1 116 aa4.96□□□□□ -1.62
UBBP4-201ENST00000583708 CASC2Q6XLA1 102 aa4.96□□□□□ -1.62
UBBP4-201ENST00000583708 HCG22E2RYF7 251 aa4.95□□□□□ -1.62
UBBP4-201ENST00000583708 Q8N9L7 120 aa4.93□□□□□ -1.62
UBBP4-201ENST00000583708 ZCCHC13Q8WW36 166 aaKnown RBP4.93□□□□□ -1.62
UBBP4-201ENST00000583708 TP53AIP1Q9HCN2 124 aa4.93□□□□□ -1.62
UBBP4-201ENST00000583708 RNF213Q63HN8 5207 aa4.91□□□□□ -1.62
UBBP4-201ENST00000583708 IMUPQ9GZP8 106 aa4.91□□□□□ -1.62
UBBP4-201ENST00000583708 WFDC13Q8IUB5 93 aa4.9□□□□□ -1.63
UBBP4-201ENST00000583708 NDUFS5O43920 106 aa4.89□□□□□ -1.63
UBBP4-201ENST00000583708 HIST1H4AP62805 103 aaKnown RBP4.89□□□□□ -1.63
UBBP4-201ENST00000583708 MUC2Q02817 5179 aa4.85□□□□□ -1.63
UBBP4-201ENST00000583708 KRTAP4-1Q9BYQ7 146 aa4.84□□□□□ -1.63
UBBP4-201ENST00000583708 UQCRQO14949 82 aa4.83□□□□□ -1.64
UBBP4-201ENST00000583708 SPINK7P58062 85 aa4.83□□□□□ -1.64
UBBP4-201ENST00000583708 RBM12B-AS1Q9P1G2 102 aa4.81□□□□□ -1.64
UBBP4-201ENST00000583708 ATOX1O00244 68 aa4.8□□□□□ -1.64
UBBP4-201ENST00000583708 Q5W150 140 aa4.8□□□□□ -1.64
UBBP4-201ENST00000583708 C7orf65Q6ZTY9 151 aa4.8□□□□□ -1.64
UBBP4-201ENST00000583708 SMIM20Q8N5G0 67 aa4.8□□□□□ -1.64
UBBP4-201ENST00000583708 A0A087WVE0 104 aa4.79□□□□□ -1.64
UBBP4-201ENST00000583708 SCGB1A1P11684 91 aa4.79□□□□□ -1.64
UBBP4-201ENST00000583708 MPLKIPQ8TAP9 179 aa4.78□□□□□ -1.64
UBBP4-201ENST00000583708 TRAV22A0A0B4J277 110 aa4.77□□□□□ -1.65
UBBP4-201ENST00000583708 MT-ATP8P03928 68 aa4.77□□□□□ -1.65
UBBP4-201ENST00000583708 HRES1P13985 223 aa4.77□□□□□ -1.65
UBBP4-201ENST00000583708 C5orf47Q569G3 176 aa4.77□□□□□ -1.65
UBBP4-201ENST00000583708 LOC101927531A0A1B0GV80 90 aa4.76□□□□□ -1.65
UBBP4-201ENST00000583708 H3BPC8 53 aa4.76□□□□□ -1.65
UBBP4-201ENST00000583708 IGKV2-30P06310 120 aa4.76□□□□□ -1.65
UBBP4-201ENST00000583708 COX6B2Q6YFQ2 88 aa4.76□□□□□ -1.65
UBBP4-201ENST00000583708 OCR1Q9BZK8 76 aa4.76□□□□□ -1.65
UBBP4-201ENST00000583708 MP68P56378 58 aa4.75□□□□□ -1.65
UBBP4-201ENST00000583708 IGKV2D-30A0A075B6S6 120 aa4.74□□□□□ -1.65
UBBP4-201ENST00000583708 KRTAP19-2Q3LHN2 52 aa4.74□□□□□ -1.65
UBBP4-201ENST00000583708 FAT4Q6V0I7 4981 aa4.74□□□□□ -1.65
UBBP4-201ENST00000583708 FLGP20930 4061 aaPredicted RBP4.73□□□□□ -1.65
UBBP4-201ENST00000583708 FAM236DA0A1B0GTK5 79 aa4.72□□□□□ -1.65
UBBP4-201ENST00000583708 H0Y9P7 68 aa4.72□□□□□ -1.65
UBBP4-201ENST00000583708 FAM236CP0DP71 79 aa4.72□□□□□ -1.65
UBBP4-201ENST00000583708 LCE2CQ5TA81 110 aa4.72□□□□□ -1.65
UBBP4-201ENST00000583708 CYP4F30PQ9H0H9 118 aa4.72□□□□□ -1.65
UBBP4-201ENST00000583708 TRAV7A0A075B6U4 112 aa4.71□□□□□ -1.66
UBBP4-201ENST00000583708 FAM236AA0A1B0GUQ0 79 aa4.7□□□□□ -1.66
UBBP4-201ENST00000583708 FAM236BA0A1B0GV22 79 aa4.7□□□□□ -1.66
UBBP4-201ENST00000583708 LCE2BO14633 110 aa4.69□□□□□ -1.66
UBBP4-201ENST00000583708 LCE2AQ5TA79 106 aaPredicted RBP4.69□□□□□ -1.66
UBBP4-201ENST00000583708 C1orf64Q8NEQ6 169 aa4.69□□□□□ -1.66
UBBP4-201ENST00000583708 LINC00208Q96KT6 92 aa4.67□□□□□ -1.66
UBBP4-201ENST00000583708 H1FX-AS1Q4G0G2 97 aa4.66□□□□□ -1.66
UBBP4-201ENST00000583708 MT1HP80294 61 aa4.65□□□□□ -1.67
UBBP4-201ENST00000583708 A8MUN3 132 aa4.63□□□□□ -1.67
UBBP4-201ENST00000583708 C4orf26Q17RF5 130 aa4.63□□□□□ -1.67
UBBP4-201ENST00000583708 SERP2Q8N6R1 65 aa4.63□□□□□ -1.67
UBBP4-201ENST00000583708 M0R2T5 61 aa4.62□□□□□ -1.67
UBBP4-201ENST00000583708 KLKP1Q107X0 134 aa4.56□□□□□ -1.68
UBBP4-201ENST00000583708 KRTAP3-1Q9BYR8 98 aa4.56□□□□□ -1.68
UBBP4-201ENST00000583708 COX7CP15954 63 aa4.55□□□□□ -1.68
UBBP4-201ENST00000583708 NDUFC1O43677 76 aa4.54□□□□□ -1.68
UBBP4-201ENST00000583708 KRTAP10-6P60371 365 aaPredicted RBP4.54□□□□□ -1.68
UBBP4-201ENST00000583708 LORP23490 312 aaPredicted RBP4.53□□□□□ -1.68
UBBP4-201ENST00000583708 S4R3F8 94 aa4.53□□□□□ -1.68
UBBP4-201ENST00000583708 CSAG1Q6PB30 78 aa4.52□□□□□ -1.69
UBBP4-201ENST00000583708 C20orf197Q8N268 126 aa4.52□□□□□ -1.69
UBBP4-201ENST00000583708 SPANXA2-OT1Q8N9U9 137 aa4.52□□□□□ -1.69
UBBP4-201ENST00000583708 DMAC1Q96GE9 116 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms