RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 LCE6AA0A183 80 aa6.34□□□□□ -1.39
CDK5RAP3-225ENST00000582482 LINC00483Q53H64 154 aa6.34□□□□□ -1.4
CDK5RAP3-225ENST00000582482 H0Y9P7 68 aa6.32□□□□□ -1.4
CDK5RAP3-225ENST00000582482 IGLV7-43P04211 117 aa6.32□□□□□ -1.4
CDK5RAP3-225ENST00000582482 SMIM26A0A096LP01 95 aa6.32□□□□□ -1.4
CDK5RAP3-225ENST00000582482 FAT1Q14517 4588 aa6.31□□□□□ -1.4
CDK5RAP3-225ENST00000582482 NDUFC1O43677 76 aa6.31□□□□□ -1.4
CDK5RAP3-225ENST00000582482 NDUFS5O43920 106 aa6.3□□□□□ -1.4
CDK5RAP3-225ENST00000582482 C1orf64Q8NEQ6 169 aa6.3□□□□□ -1.4
CDK5RAP3-225ENST00000582482 hDV103S1A0JD37 113 aa6.3□□□□□ -1.4
CDK5RAP3-225ENST00000582482 PCOTHQ58A44 107 aa6.3□□□□□ -1.4
CDK5RAP3-225ENST00000582482 KMT2CQ8NEZ4 4911 aaKnown RBP6.28□□□□□ -1.4
CDK5RAP3-225ENST00000582482 DYNC1H1Q14204 4646 aaKnown RBP6.27□□□□□ -1.41
CDK5RAP3-225ENST00000582482 RETNLBQ9BQ08 111 aa6.27□□□□□ -1.41
CDK5RAP3-225ENST00000582482 C8orf17Q9NRJ1 99 aa6.27□□□□□ -1.41
CDK5RAP3-225ENST00000582482 TRAV22A0A0B4J277 110 aa6.26□□□□□ -1.41
CDK5RAP3-225ENST00000582482 MP68P56378 58 aa6.25□□□□□ -1.41
CDK5RAP3-225ENST00000582482 KRTAP13-2Q52LG2 175 aa6.25□□□□□ -1.41
CDK5RAP3-225ENST00000582482 ZNF706Q9Y5V0 76 aaPredicted RBP6.25□□□□□ -1.41
CDK5RAP3-225ENST00000582482 NDUFB1O75438 58 aa6.24□□□□□ -1.41
CDK5RAP3-225ENST00000582482 A0A1B0GVX0 72 aa6.24□□□□□ -1.41
CDK5RAP3-225ENST00000582482 SMR3BP02814 79 aaPredicted RBP6.22□□□□□ -1.41
CDK5RAP3-225ENST00000582482 ATP5EP56381 51 aaPredicted RBP6.22□□□□□ -1.41
CDK5RAP3-225ENST00000582482 KRTAP21-3Q3LHN1 58 aa6.22□□□□□ -1.41
CDK5RAP3-225ENST00000582482 Q5W150 140 aa6.21□□□□□ -1.41
CDK5RAP3-225ENST00000582482 BRK1Q8WUW1 75 aa6.21□□□□□ -1.41
CDK5RAP3-225ENST00000582482 CDK2AP2O75956 126 aa6.2□□□□□ -1.42
CDK5RAP3-225ENST00000582482 CD164Q04900 197 aa6.2□□□□□ -1.42
CDK5RAP3-225ENST00000582482 PSPHP1O15172 72 aa6.2□□□□□ -1.42
CDK5RAP3-225ENST00000582482 PLA2G1BP04054 148 aaKnown RBP6.18□□□□□ -1.42
CDK5RAP3-225ENST00000582482 ASB16-AS1Q495Z4 193 aa6.18□□□□□ -1.42
CDK5RAP3-225ENST00000582482 RYR2Q92736 4967 aa6.18□□□□□ -1.42
CDK5RAP3-225ENST00000582482 Q6ZSA8 131 aa6.18□□□□□ -1.42
CDK5RAP3-225ENST00000582482 C1orf195Q5TG92 126 aa6.17□□□□□ -1.42
CDK5RAP3-225ENST00000582482 APOBP04114 4563 aaKnown RBP6.17□□□□□ -1.42
CDK5RAP3-225ENST00000582482 MRPL34Q9BQ48 92 aaKnown RBP6.17□□□□□ -1.42
CDK5RAP3-225ENST00000582482 KRTAP1-4P0C5Y4 121 aa6.16□□□□□ -1.42
CDK5RAP3-225ENST00000582482 A8MU10 97 aa6.14□□□□□ -1.43
CDK5RAP3-225ENST00000582482 SEC61GP60059 68 aa6.14□□□□□ -1.43
CDK5RAP3-225ENST00000582482 V9GYY9 64 aa6.14□□□□□ -1.43
CDK5RAP3-225ENST00000582482 CYP4F30PQ9H0H9 118 aa6.13□□□□□ -1.43
CDK5RAP3-225ENST00000582482 Q8N9P0 234 aaPredicted RBP6.12□□□□□ -1.43
CDK5RAP3-225ENST00000582482 A8MUN3 132 aa6.11□□□□□ -1.43
CDK5RAP3-225ENST00000582482 PRR26Q8N8Z3 221 aa6.1□□□□□ -1.43
CDK5RAP3-225ENST00000582482 LRP1Q07954 4544 aaKnown RBP6.1□□□□□ -1.43
CDK5RAP3-225ENST00000582482 RYR3Q15413 4870 aa6.09□□□□□ -1.43
CDK5RAP3-225ENST00000582482 COA5Q86WW8 74 aa6.09□□□□□ -1.43
CDK5RAP3-225ENST00000582482 SSBP3-AS1Q7Z2R9 100 aa6.08□□□□□ -1.44
CDK5RAP3-225ENST00000582482 PKHD1L1Q86WI1 4243 aa6.07□□□□□ -1.44
CDK5RAP3-225ENST00000582482 KRTAP13-3Q3SY46 172 aa6.07□□□□□ -1.44
CDK5RAP3-225ENST00000582482 TP53AIP1Q9HCN2 124 aa6.06□□□□□ -1.44
CDK5RAP3-225ENST00000582482 LINC00313P59037 77 aa6.06□□□□□ -1.44
CDK5RAP3-225ENST00000582482 Q1T7F1 81 aa6.06□□□□□ -1.44
CDK5RAP3-225ENST00000582482 IGLV7-46A0A075B6I9 117 aa6.05□□□□□ -1.44
CDK5RAP3-225ENST00000582482 TYMSOSQ8TAI1 123 aa6.05□□□□□ -1.44
CDK5RAP3-225ENST00000582482 H3BPC8 53 aa6.05□□□□□ -1.44
CDK5RAP3-225ENST00000582482 SPANXA2-OT1Q8N9U9 137 aa6.04□□□□□ -1.44
CDK5RAP3-225ENST00000582482 HRES1P13985 223 aa6.04□□□□□ -1.44
CDK5RAP3-225ENST00000582482 SPAG11AQ6PDA7 123 aa6.04□□□□□ -1.44
CDK5RAP3-225ENST00000582482 KRTAP16-1A8MUX0 517 aa6.02□□□□□ -1.45
CDK5RAP3-225ENST00000582482 PRR15LQ9BU68 103 aa6.02□□□□□ -1.45
CDK5RAP3-225ENST00000582482 PMAIP1Q13794 54 aa6.01□□□□□ -1.45
CDK5RAP3-225ENST00000582482 Q5VV11 94 aa6.01□□□□□ -1.45
CDK5RAP3-225ENST00000582482 MYCBP2O75592 4640 aa6□□□□□ -1.45
CDK5RAP3-225ENST00000582482 IGKV2D-30A0A075B6S6 120 aa6□□□□□ -1.45
CDK5RAP3-225ENST00000582482 C9orf92A6NGG3 77 aa6□□□□□ -1.45
CDK5RAP3-225ENST00000582482 IGKV2-30P06310 120 aa6□□□□□ -1.45
CDK5RAP3-225ENST00000582482 FLG2Q5D862 2391 aaPredicted RBP5.98□□□□□ -1.45
CDK5RAP3-225ENST00000582482 A0A1B0GVY2 172 aa5.97□□□□□ -1.45
CDK5RAP3-225ENST00000582482 HSPG2P98160 4391 aa5.96□□□□□ -1.46
CDK5RAP3-225ENST00000582482 CHKB-CPT1BH3BT56 60 aa5.96□□□□□ -1.46
CDK5RAP3-225ENST00000582482 LOC101927531A0A1B0GV80 90 aa5.95□□□□□ -1.46
CDK5RAP3-225ENST00000582482 C8orf87E5RJ46 101 aa5.95□□□□□ -1.46
CDK5RAP3-225ENST00000582482 KIAA1109Q2LD37 5005 aa5.95□□□□□ -1.46
CDK5RAP3-225ENST00000582482 KRTAP10-4P60372 401 aaPredicted RBP5.94□□□□□ -1.46
CDK5RAP3-225ENST00000582482 LINC00304Q8N9R0 145 aa5.94□□□□□ -1.46
CDK5RAP3-225ENST00000582482 KRTAP17-1Q9BYP8 105 aa5.92□□□□□ -1.46
CDK5RAP3-225ENST00000582482 LIMD2Q9BT23 127 aa5.92□□□□□ -1.46
CDK5RAP3-225ENST00000582482 TNXBP22105 4242 aa5.91□□□□□ -1.46
CDK5RAP3-225ENST00000582482 Q8N1X5 172 aa5.9□□□□□ -1.46
CDK5RAP3-225ENST00000582482 EPPK1P58107 5090 aaKnown RBP5.9□□□□□ -1.46
CDK5RAP3-225ENST00000582482 SPINK1P00995 79 aa5.89□□□□□ -1.47
CDK5RAP3-225ENST00000582482 SPINK7P58062 85 aa5.89□□□□□ -1.47
CDK5RAP3-225ENST00000582482 DMBT1Q9UGM3 2413 aaPredicted RBP5.89□□□□□ -1.47
CDK5RAP3-225ENST00000582482 FAT3Q8TDW7 4589 aa5.89□□□□□ -1.47
CDK5RAP3-225ENST00000582482 LCA10Q71F78 164 aa5.88□□□□□ -1.47
CDK5RAP3-225ENST00000582482 A6NED7 52 aa5.87□□□□□ -1.47
CDK5RAP3-225ENST00000582482 RYR1P21817 5038 aa5.86□□□□□ -1.47
CDK5RAP3-225ENST00000582482 SPTSSBQ8NFR3 76 aa5.85□□□□□ -1.47
CDK5RAP3-225ENST00000582482 DMAC1Q96GE9 116 aa5.84□□□□□ -1.47
CDK5RAP3-225ENST00000582482 C7orf65Q6ZTY9 151 aa5.83□□□□□ -1.48
CDK5RAP3-225ENST00000582482 ACYP2P14621 99 aa5.83□□□□□ -1.48
CDK5RAP3-225ENST00000582482 LINC01558Q9Y6Z2 57 aa5.83□□□□□ -1.48
CDK5RAP3-225ENST00000582482 KTN1-AS1Q86SY8 53 aa5.82□□□□□ -1.48
CDK5RAP3-225ENST00000582482 Q75L30 129 aa5.81□□□□□ -1.48
CDK5RAP3-225ENST00000582482 LPAP08519 4548 aa5.81□□□□□ -1.48
CDK5RAP3-225ENST00000582482 RBM12B-AS1Q9P1G2 102 aa5.8□□□□□ -1.48
CDK5RAP3-225ENST00000582482 A6NN06 94 aa5.79□□□□□ -1.48
CDK5RAP3-225ENST00000582482 ABCA13Q86UQ4 5058 aa5.78□□□□□ -1.48
CDK5RAP3-225ENST00000582482 ATP11AUNQ6ZP68 121 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms