RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 Q75L30 129 aa8.73□□□□□ -1.01
RNF43-206ENST00000582293 GTF2H5Q6ZYL4 71 aa8.71□□□□□ -1.02
RNF43-206ENST00000582293 C20orf166-AS1Q96NR2 134 aa8.71□□□□□ -1.02
RNF43-206ENST00000582293 A8MUU9 505 aa8.7□□□□□ -1.02
RNF43-206ENST00000582293 A0A1B0GVX0 72 aa8.69□□□□□ -1.02
RNF43-206ENST00000582293 LINC00313P59037 77 aa8.69□□□□□ -1.02
RNF43-206ENST00000582293 IGHV6-1A0A0B4J1U7 121 aa8.68□□□□□ -1.02
RNF43-206ENST00000582293 J3KT08 172 aa8.68□□□□□ -1.02
RNF43-206ENST00000582293 F8W1H4 67 aa8.65□□□□□ -1.02
RNF43-206ENST00000582293 NREPQ16612 68 aa8.65□□□□□ -1.02
RNF43-206ENST00000582293 IGKV3D-7A0A0C4DH55 119 aa8.64□□□□□ -1.03
RNF43-206ENST00000582293 A8MWP4 228 aa8.63□□□□□ -1.03
RNF43-206ENST00000582293 KRTAP19-2Q3LHN2 52 aa8.63□□□□□ -1.03
RNF43-206ENST00000582293 C8orf87E5RJ46 101 aa8.62□□□□□ -1.03
RNF43-206ENST00000582293 ETDBQ3ZM63 59 aa8.61□□□□□ -1.03
RNF43-206ENST00000582293 A0A0U1RQV1 116 aa8.6□□□□□ -1.03
RNF43-206ENST00000582293 ATP11AUNQ6ZP68 121 aa8.6□□□□□ -1.03
RNF43-206ENST00000582293 Q6ZVQ6 151 aa8.6□□□□□ -1.03
RNF43-206ENST00000582293 LCE2AQ5TA79 106 aaPredicted RBP8.59□□□□□ -1.03
RNF43-206ENST00000582293 LCE2CQ5TA81 110 aa8.58□□□□□ -1.04
RNF43-206ENST00000582293 LINC00846Q9NV44 126 aa8.58□□□□□ -1.04
RNF43-206ENST00000582293 NDUFB1O75438 58 aa8.57□□□□□ -1.04
RNF43-206ENST00000582293 PRR15Q8IV56 129 aa8.57□□□□□ -1.04
RNF43-206ENST00000582293 C8orf17Q9NRJ1 99 aa8.57□□□□□ -1.04
RNF43-206ENST00000582293 A0A1B0GV90 55 aa8.55□□□□□ -1.04
RNF43-206ENST00000582293 K7EQZ3 153 aa8.55□□□□□ -1.04
RNF43-206ENST00000582293 MMP24-AS1A0A0U1RRL7 71 aa8.53□□□□□ -1.04
RNF43-206ENST00000582293 BPY2O14599 106 aa8.53□□□□□ -1.04
RNF43-206ENST00000582293 Q8N9P0 234 aaPredicted RBP8.52□□□□□ -1.05
RNF43-206ENST00000582293 Q8N9L7 120 aa8.49□□□□□ -1.05
RNF43-206ENST00000582293 UBL5Q9BZL1 73 aa8.47□□□□□ -1.05
RNF43-206ENST00000582293 TMEM254Q8TBM7 123 aa8.44□□□□□ -1.06
RNF43-206ENST00000582293 ZCCHC13Q8WW36 166 aaKnown RBP8.44□□□□□ -1.06
RNF43-206ENST00000582293 MRPL34Q9BQ48 92 aaKnown RBP8.43□□□□□ -1.06
RNF43-206ENST00000582293 hDV103S1A0JD37 113 aa8.42□□□□□ -1.06
RNF43-206ENST00000582293 MT1HP80294 61 aa8.41□□□□□ -1.06
RNF43-206ENST00000582293 HRES1P13985 223 aa8.37□□□□□ -1.07
RNF43-206ENST00000582293 WFDC13Q8IUB5 93 aa8.37□□□□□ -1.07
RNF43-206ENST00000582293 FLGP20930 4061 aaPredicted RBP8.36□□□□□ -1.07
RNF43-206ENST00000582293 FAM240AA0A1B0GVK7 77 aa8.35□□□□□ -1.07
RNF43-206ENST00000582293 CXCL6P80162 114 aa8.35□□□□□ -1.07
RNF43-206ENST00000582293 CASC2Q6XLA1 102 aa8.35□□□□□ -1.07
RNF43-206ENST00000582293 MPLKIPQ8TAP9 179 aa8.35□□□□□ -1.07
RNF43-206ENST00000582293 ACYP1P07311 99 aa8.34□□□□□ -1.07
RNF43-206ENST00000582293 COX6B2Q6YFQ2 88 aa8.32□□□□□ -1.08
RNF43-206ENST00000582293 HCG22E2RYF7 251 aa8.31□□□□□ -1.08
RNF43-206ENST00000582293 SPINK7P58062 85 aa8.31□□□□□ -1.08
RNF43-206ENST00000582293 Q5W150 140 aa8.31□□□□□ -1.08
RNF43-206ENST00000582293 NDUFS5O43920 106 aa8.3□□□□□ -1.08
RNF43-206ENST00000582293 ATP5EP2Q5VTU8 51 aa8.21□□□□□ -1.1
RNF43-206ENST00000582293 RBM12B-AS1Q9P1G2 102 aa8.2□□□□□ -1.1
RNF43-206ENST00000582293 LORP23490 312 aaPredicted RBP8.19□□□□□ -1.1
RNF43-206ENST00000582293 KRTAP10-6P60371 365 aaPredicted RBP8.19□□□□□ -1.1
RNF43-206ENST00000582293 LINC00643Q86TS7 51 aa8.18□□□□□ -1.1
RNF43-206ENST00000582293 FAM236DA0A1B0GTK5 79 aa8.16□□□□□ -1.1
RNF43-206ENST00000582293 FAM236CP0DP71 79 aa8.16□□□□□ -1.1
RNF43-206ENST00000582293 M0R2T5 61 aa8.15□□□□□ -1.1
RNF43-206ENST00000582293 IGKV2D-30A0A075B6S6 120 aa8.14□□□□□ -1.11
RNF43-206ENST00000582293 IGKV2-30P06310 120 aa8.14□□□□□ -1.11
RNF43-206ENST00000582293 HIST1H4AP62805 103 aaKnown RBP8.13□□□□□ -1.11
RNF43-206ENST00000582293 A0A087WVE0 104 aa8.12□□□□□ -1.11
RNF43-206ENST00000582293 C7orf65Q6ZTY9 151 aa8.12□□□□□ -1.11
RNF43-206ENST00000582293 J3QR89 54 aa8.1□□□□□ -1.11
RNF43-206ENST00000582293 TP53AIP1Q9HCN2 124 aa8.1□□□□□ -1.11
RNF43-206ENST00000582293 KRTAP9-2Q9BYQ4 174 aa8.07□□□□□ -1.12
RNF43-206ENST00000582293 KRTAP9-8Q9BYQ0 159 aa8.03□□□□□ -1.12
RNF43-206ENST00000582293 LCE2DQ5TA82 110 aaPredicted RBP8.01□□□□□ -1.13
RNF43-206ENST00000582293 C4orf26Q17RF5 130 aa8□□□□□ -1.13
RNF43-206ENST00000582293 TRAV22A0A0B4J277 110 aa7.99□□□□□ -1.13
RNF43-206ENST00000582293 H1FX-AS1Q4G0G2 97 aa7.97□□□□□ -1.13
RNF43-206ENST00000582293 KRTAP3-1Q9BYR8 98 aa7.97□□□□□ -1.13
RNF43-206ENST00000582293 K7ERU9 68 aa7.96□□□□□ -1.14
RNF43-206ENST00000582293 UQCRQO14949 82 aa7.96□□□□□ -1.14
RNF43-206ENST00000582293 CYP4F30PQ9H0H9 118 aa7.95□□□□□ -1.14
RNF43-206ENST00000582293 OCR1Q9BZK8 76 aa7.94□□□□□ -1.14
RNF43-206ENST00000582293 MT2AP02795 61 aa7.93□□□□□ -1.14
RNF43-206ENST00000582293 MT-ATP8P03928 68 aa7.92□□□□□ -1.14
RNF43-206ENST00000582293 H0Y9P7 68 aa7.91□□□□□ -1.14
RNF43-206ENST00000582293 LOC101927531A0A1B0GV80 90 aa7.9□□□□□ -1.14
RNF43-206ENST00000582293 MT1FP04733 61 aa7.88□□□□□ -1.15
RNF43-206ENST00000582293 C1orf64Q8NEQ6 169 aa7.87□□□□□ -1.15
RNF43-206ENST00000582293 ATOX1O00244 68 aa7.86□□□□□ -1.15
RNF43-206ENST00000582293 IMUPQ9GZP8 106 aa7.86□□□□□ -1.15
RNF43-206ENST00000582293 KRTAP9-6A0A140TA67 174 aa7.82□□□□□ -1.16
RNF43-206ENST00000582293 FSIP2Q5CZC0 6907 aa7.81□□□□□ -1.16
RNF43-206ENST00000582293 LINC00208Q96KT6 92 aa7.81□□□□□ -1.16
RNF43-206ENST00000582293 KLKP1Q107X0 134 aa7.79□□□□□ -1.16
RNF43-206ENST00000582293 C5orf47Q569G3 176 aa7.77□□□□□ -1.17
RNF43-206ENST00000582293 SCGB1A1P11684 91 aa7.76□□□□□ -1.17
RNF43-206ENST00000582293 PCP4P48539 62 aa7.76□□□□□ -1.17
RNF43-206ENST00000582293 MP68P56378 58 aa7.76□□□□□ -1.17
RNF43-206ENST00000582293 KRTAP10-10P60014 251 aa7.76□□□□□ -1.17
RNF43-206ENST00000582293 KRTAP9-3Q9BYQ3 159 aa7.76□□□□□ -1.17
RNF43-206ENST00000582293 LCA10Q71F78 164 aa7.75□□□□□ -1.17
RNF43-206ENST00000582293 S4R3F8 94 aa7.75□□□□□ -1.17
RNF43-206ENST00000582293 FAM236AA0A1B0GUQ0 79 aa7.74□□□□□ -1.17
RNF43-206ENST00000582293 FAM236BA0A1B0GV22 79 aa7.74□□□□□ -1.17
RNF43-206ENST00000582293 KRTAP3-3Q9BYR6 98 aa7.72□□□□□ -1.17
RNF43-206ENST00000582293 USH2AO75445 5202 aa7.7□□□□□ -1.18
RNF43-206ENST00000582293 H3BPC8 53 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms