RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 HECTD4Q9Y4D8 3996 aa8.14□□□□□ -1.11
RNF43-205ENST00000581868 DNAH8Q96JB1 4490 aa8.13□□□□□ -1.11
RNF43-205ENST00000581868 PLAC8Q9NZF1 115 aa8.12□□□□□ -1.11
RNF43-205ENST00000581868 VPS13DQ5THJ4 4388 aa8.12□□□□□ -1.11
RNF43-205ENST00000581868 SPAG11AQ6PDA7 123 aa8.12□□□□□ -1.11
RNF43-205ENST00000581868 CIRBP-AS1Q8TBR5 109 aa8.1□□□□□ -1.11
RNF43-205ENST00000581868 A6NED7 52 aa8.09□□□□□ -1.11
RNF43-205ENST00000581868 KMT2AQ03164 3969 aa8.08□□□□□ -1.12
RNF43-205ENST00000581868 TGP01266 2768 aa8.08□□□□□ -1.12
RNF43-205ENST00000581868 HRES1P13985 223 aa8.08□□□□□ -1.12
RNF43-205ENST00000581868 Q75L30 129 aa8.07□□□□□ -1.12
RNF43-205ENST00000581868 Q5W150 140 aa8.07□□□□□ -1.12
RNF43-205ENST00000581868 LOC101927531A0A1B0GV80 90 aa8.06□□□□□ -1.12
RNF43-205ENST00000581868 SPTSSBQ8NFR3 76 aa8.06□□□□□ -1.12
RNF43-205ENST00000581868 DNAH2Q9P225 4427 aa8.06□□□□□ -1.12
RNF43-205ENST00000581868 FBN3Q75N90 2809 aa8.05□□□□□ -1.12
RNF43-205ENST00000581868 IGLV7-43P04211 117 aa8.05□□□□□ -1.12
RNF43-205ENST00000581868 LCA10Q71F78 164 aa8.05□□□□□ -1.12
RNF43-205ENST00000581868 DNAH17Q9UFH2 4485 aa8.04□□□□□ -1.12
RNF43-205ENST00000581868 MEGF8Q7Z7M0 2845 aa8.04□□□□□ -1.12
RNF43-205ENST00000581868 LINC01558Q9Y6Z2 57 aa8.02□□□□□ -1.13
RNF43-205ENST00000581868 C1orf134Q5TEV5 83 aa8.01□□□□□ -1.13
RNF43-205ENST00000581868 PRKDCP78527 4128 aaKnown RBP8.01□□□□□ -1.13
RNF43-205ENST00000581868 C4orf48Q5BLP8 95 aa7.99□□□□□ -1.13
RNF43-205ENST00000581868 PRR26Q8N8Z3 221 aa7.99□□□□□ -1.13
RNF43-205ENST00000581868 RETNLBQ9BQ08 111 aa7.98□□□□□ -1.13
RNF43-205ENST00000581868 KRTAP13-3Q3SY46 172 aa7.98□□□□□ -1.13
RNF43-205ENST00000581868 KTN1-AS1Q86SY8 53 aa7.97□□□□□ -1.13
RNF43-205ENST00000581868 LY6G6CO95867 125 aa7.96□□□□□ -1.14
RNF43-205ENST00000581868 ATP11AUNQ6ZP68 121 aa7.95□□□□□ -1.14
RNF43-205ENST00000581868 SSBP3-AS1Q7Z2R9 100 aa7.95□□□□□ -1.14
RNF43-205ENST00000581868 SPINK7P58062 85 aa7.95□□□□□ -1.14
RNF43-205ENST00000581868 CDC42SE1Q9NRR8 79 aa7.95□□□□□ -1.14
RNF43-205ENST00000581868 RBM12B-AS1Q9P1G2 102 aa7.95□□□□□ -1.14
RNF43-205ENST00000581868 LINC00313P59037 77 aa7.93□□□□□ -1.14
RNF43-205ENST00000581868 C8orf87E5RJ46 101 aa7.93□□□□□ -1.14
RNF43-205ENST00000581868 DNAH6Q9C0G6 4158 aa7.92□□□□□ -1.14
RNF43-205ENST00000581868 ALMS1Q8TCU4 4167 aa7.92□□□□□ -1.14
RNF43-205ENST00000581868 KRTAP10-2P60368 255 aa7.92□□□□□ -1.14
RNF43-205ENST00000581868 ACYP2P14621 99 aa7.91□□□□□ -1.14
RNF43-205ENST00000581868 DNAH11Q96DT5 4516 aa7.88□□□□□ -1.15
RNF43-205ENST00000581868 KRTAP13-2Q52LG2 175 aa7.88□□□□□ -1.15
RNF43-205ENST00000581868 FAM229AH3BQW9 127 aa7.86□□□□□ -1.15
RNF43-205ENST00000581868 A6NN06 94 aa7.86□□□□□ -1.15
RNF43-205ENST00000581868 DMAC1Q96GE9 116 aa7.84□□□□□ -1.15
RNF43-205ENST00000581868 DNAH5Q8TE73 4624 aa7.84□□□□□ -1.15
RNF43-205ENST00000581868 IGKV2-30P06310 120 aa7.82□□□□□ -1.16
RNF43-205ENST00000581868 KRTAP10-1P60331 282 aa7.81□□□□□ -1.16
RNF43-205ENST00000581868 LRP1BQ9NZR2 4599 aa7.8□□□□□ -1.16
RNF43-205ENST00000581868 IGKV2D-30A0A075B6S6 120 aa7.79□□□□□ -1.16
RNF43-205ENST00000581868 KRTAP16-1A8MUX0 517 aa7.78□□□□□ -1.16
RNF43-205ENST00000581868 A0A1B0GU69 56 aa7.76□□□□□ -1.17
RNF43-205ENST00000581868 KRTAP1-4P0C5Y4 121 aa7.75□□□□□ -1.17
RNF43-205ENST00000581868 Q6ZSA8 131 aa7.74□□□□□ -1.17
RNF43-205ENST00000581868 DNHD1Q96M86 4753 aa7.73□□□□□ -1.17
RNF43-205ENST00000581868 C7orf65Q6ZTY9 151 aa7.72□□□□□ -1.17
RNF43-205ENST00000581868 PLA2G1BP04054 148 aaKnown RBP7.72□□□□□ -1.17
RNF43-205ENST00000581868 PKD1P98161 4303 aa7.7□□□□□ -1.18
RNF43-205ENST00000581868 TYMSOSQ8TAI1 123 aa7.69□□□□□ -1.18
RNF43-205ENST00000581868 VPS13BQ7Z7G8 4022 aa7.68□□□□□ -1.18
RNF43-205ENST00000581868 H3BS24 57 aa7.66□□□□□ -1.18
RNF43-205ENST00000581868 HYDINQ4G0P3 5121 aa7.66□□□□□ -1.18
RNF43-205ENST00000581868 FAT2Q9NYQ8 4349 aa7.64□□□□□ -1.19
RNF43-205ENST00000581868 SPINK1P00995 79 aa7.63□□□□□ -1.19
RNF43-205ENST00000581868 SPATA8Q6RVD6 105 aa7.62□□□□□ -1.19
RNF43-205ENST00000581868 MIR22HGQ0VDD5 57 aa7.62□□□□□ -1.19
RNF43-205ENST00000581868 Q8N1X5 172 aa7.62□□□□□ -1.19
RNF43-205ENST00000581868 UQCR11O14957 56 aa7.61□□□□□ -1.19
RNF43-205ENST00000581868 PRAC1Q96KF2 57 aa7.59□□□□□ -1.19
RNF43-205ENST00000581868 ADM2Q7Z4H4 148 aa7.57□□□□□ -1.2
RNF43-205ENST00000581868 LINC00304Q8N9R0 145 aa7.57□□□□□ -1.2
RNF43-205ENST00000581868 SMR3BP02814 79 aaPredicted RBP7.52□□□□□ -1.21
RNF43-205ENST00000581868 C9orf92A6NGG3 77 aa7.52□□□□□ -1.21
RNF43-205ENST00000581868 PKHD1P08F94 4074 aa7.5□□□□□ -1.21
RNF43-205ENST00000581868 LINC01554Q52M75 96 aa7.48□□□□□ -1.21
RNF43-205ENST00000581868 RPS29P62273 56 aaKnown RBP7.45□□□□□ -1.22
RNF43-205ENST00000581868 A8MUU9 505 aa7.4□□□□□ -1.23
RNF43-205ENST00000581868 C20orf166-AS1Q96NR2 134 aa7.39□□□□□ -1.23
RNF43-205ENST00000581868 KRTAP3-1Q9BYR8 98 aa7.38□□□□□ -1.23
RNF43-205ENST00000581868 FAT1Q14517 4588 aa7.37□□□□□ -1.23
RNF43-205ENST00000581868 SACSQ9NZJ4 4579 aa7.37□□□□□ -1.23
RNF43-205ENST00000581868 DYNC1H1Q14204 4646 aaKnown RBP7.37□□□□□ -1.23
RNF43-205ENST00000581868 KRTAP21-3Q3LHN1 58 aa7.37□□□□□ -1.23
RNF43-205ENST00000581868 H0YAA0 97 aa7.34□□□□□ -1.23
RNF43-205ENST00000581868 CSAG1Q6PB30 78 aa7.33□□□□□ -1.24
RNF43-205ENST00000581868 A0A1B0GU33 70 aa7.31□□□□□ -1.24
RNF43-205ENST00000581868 KRTAP10-4P60372 401 aaPredicted RBP7.3□□□□□ -1.24
RNF43-205ENST00000581868 PKHD1L1Q86WI1 4243 aa7.27□□□□□ -1.25
RNF43-205ENST00000581868 H1FX-AS1Q4G0G2 97 aa7.26□□□□□ -1.25
RNF43-205ENST00000581868 APOBP04114 4563 aaKnown RBP7.26□□□□□ -1.25
RNF43-205ENST00000581868 A0A1B0GVY2 172 aa7.25□□□□□ -1.25
RNF43-205ENST00000581868 COX6B2Q6YFQ2 88 aa7.22□□□□□ -1.25
RNF43-205ENST00000581868 FLG2Q5D862 2391 aaPredicted RBP7.19□□□□□ -1.26
RNF43-205ENST00000581868 LRP1Q07954 4544 aaKnown RBP7.11□□□□□ -1.27
RNF43-205ENST00000581868 DMBT1Q9UGM3 2413 aaPredicted RBP7.1□□□□□ -1.27
RNF43-205ENST00000581868 FAT3Q8TDW7 4589 aa7.09□□□□□ -1.27
RNF43-205ENST00000581868 K7ERS5 55 aa7.09□□□□□ -1.27
RNF43-205ENST00000581868 KRTAP25-1Q3LHN0 102 aa7.09□□□□□ -1.27
RNF43-205ENST00000581868 CRIPTQ9P021 101 aa7.08□□□□□ -1.28
RNF43-205ENST00000581868 KRTAP3-3Q9BYR6 98 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms