RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 KRTAP16-1A8MUX0 517 aa6.64□□□□□ -1.35
SNORD55-201ENST00000581525 H3BT86 120 aa6.64□□□□□ -1.35
SNORD55-201ENST00000581525 LINC00313P59037 77 aa6.64□□□□□ -1.35
SNORD55-201ENST00000581525 ATP11AUNQ6ZP68 121 aa6.63□□□□□ -1.35
SNORD55-201ENST00000581525 J3KT08 172 aa6.62□□□□□ -1.35
SNORD55-201ENST00000581525 DSCR10P59022 87 aa6.62□□□□□ -1.35
SNORD55-201ENST00000581525 DEFB116Q30KQ4 102 aa6.62□□□□□ -1.35
SNORD55-201ENST00000581525 SIGMAR1Q99720 223 aa6.62□□□□□ -1.35
SNORD55-201ENST00000581525 NOTCH2NLQ7Z3S9 236 aa6.61□□□□□ -1.35
SNORD55-201ENST00000581525 C14orf132Q9NPU4 83 aa6.6□□□□□ -1.35
SNORD55-201ENST00000581525 A0A1B0GVX0 72 aa6.58□□□□□ -1.36
SNORD55-201ENST00000581525 C8orf87E5RJ46 101 aa6.58□□□□□ -1.36
SNORD55-201ENST00000581525 FLGP20930 4061 aaPredicted RBP6.56□□□□□ -1.36
SNORD55-201ENST00000581525 SPCS1Q9Y6A9 102 aa6.56□□□□□ -1.36
SNORD55-201ENST00000581525 IGHV6-1A0A0B4J1U7 121 aa6.55□□□□□ -1.36
SNORD55-201ENST00000581525 SMCPP49901 116 aaPredicted RBP6.55□□□□□ -1.36
SNORD55-201ENST00000581525 MT1HP80294 61 aa6.55□□□□□ -1.36
SNORD55-201ENST00000581525 C5orf47Q569G3 176 aa6.54□□□□□ -1.36
SNORD55-201ENST00000581525 PRO0461Q9UI25 63 aa6.54□□□□□ -1.36
SNORD55-201ENST00000581525 A8MWP4 228 aa6.53□□□□□ -1.36
SNORD55-201ENST00000581525 NDUFB1O75438 58 aa6.52□□□□□ -1.37
SNORD55-201ENST00000581525 NREPQ16612 68 aa6.52□□□□□ -1.37
SNORD55-201ENST00000581525 Q8N9P0 234 aaPredicted RBP6.51□□□□□ -1.37
SNORD55-201ENST00000581525 IGKV3D-7A0A0C4DH55 119 aa6.5□□□□□ -1.37
SNORD55-201ENST00000581525 K7EP34 96 aa6.5□□□□□ -1.37
SNORD55-201ENST00000581525 PRR15Q8IV56 129 aa6.49□□□□□ -1.37
SNORD55-201ENST00000581525 C8orf17Q9NRJ1 99 aa6.48□□□□□ -1.37
SNORD55-201ENST00000581525 MPLKIPQ8TAP9 179 aa6.46□□□□□ -1.38
SNORD55-201ENST00000581525 J3QR89 54 aa6.45□□□□□ -1.38
SNORD55-201ENST00000581525 COX6B2Q6YFQ2 88 aa6.43□□□□□ -1.38
SNORD55-201ENST00000581525 GTF2H5Q6ZYL4 71 aa6.43□□□□□ -1.38
SNORD55-201ENST00000581525 ZCCHC13Q8WW36 166 aaKnown RBP6.43□□□□□ -1.38
SNORD55-201ENST00000581525 KRTAP9-2Q9BYQ4 174 aa6.43□□□□□ -1.38
SNORD55-201ENST00000581525 F8W1H4 67 aa6.42□□□□□ -1.38
SNORD55-201ENST00000581525 LORP23490 312 aaPredicted RBP6.42□□□□□ -1.38
SNORD55-201ENST00000581525 Q6ZVQ6 151 aa6.42□□□□□ -1.38
SNORD55-201ENST00000581525 MMP24-AS1A0A0U1RRL7 71 aa6.41□□□□□ -1.38
SNORD55-201ENST00000581525 HRES1P13985 223 aa6.41□□□□□ -1.38
SNORD55-201ENST00000581525 KRTAP10-6P60371 365 aaPredicted RBP6.4□□□□□ -1.38
SNORD55-201ENST00000581525 LCE2DQ5TA82 110 aaPredicted RBP6.4□□□□□ -1.38
SNORD55-201ENST00000581525 TMEM254Q8TBM7 123 aa6.4□□□□□ -1.38
SNORD55-201ENST00000581525 K7EQZ3 153 aa6.39□□□□□ -1.39
SNORD55-201ENST00000581525 BPY2O14599 106 aa6.39□□□□□ -1.39
SNORD55-201ENST00000581525 MRPL34Q9BQ48 92 aaKnown RBP6.38□□□□□ -1.39
SNORD55-201ENST00000581525 LINC00846Q9NV44 126 aa6.38□□□□□ -1.39
SNORD55-201ENST00000581525 hDV103S1A0JD37 113 aa6.36□□□□□ -1.39
SNORD55-201ENST00000581525 SPINK7P58062 85 aa6.34□□□□□ -1.39
SNORD55-201ENST00000581525 ETDBQ3ZM63 59 aa6.34□□□□□ -1.39
SNORD55-201ENST00000581525 UBL5Q9BZL1 73 aa6.34□□□□□ -1.39
SNORD55-201ENST00000581525 M0R2T5 61 aa6.32□□□□□ -1.4
SNORD55-201ENST00000581525 RBM12B-AS1Q9P1G2 102 aa6.32□□□□□ -1.4
SNORD55-201ENST00000581525 Q8N9L7 120 aa6.29□□□□□ -1.4
SNORD55-201ENST00000581525 SMIM20Q8N5G0 67 aa6.28□□□□□ -1.4
SNORD55-201ENST00000581525 CASC2Q6XLA1 102 aa6.27□□□□□ -1.41
SNORD55-201ENST00000581525 CXCL6P80162 114 aa6.26□□□□□ -1.41
SNORD55-201ENST00000581525 Q5W150 140 aa6.26□□□□□ -1.41
SNORD55-201ENST00000581525 WFDC13Q8IUB5 93 aa6.26□□□□□ -1.41
SNORD55-201ENST00000581525 KRTAP9-8Q9BYQ0 159 aa6.26□□□□□ -1.41
SNORD55-201ENST00000581525 FAM236DA0A1B0GTK5 79 aa6.24□□□□□ -1.41
SNORD55-201ENST00000581525 FAM236CP0DP71 79 aa6.24□□□□□ -1.41
SNORD55-201ENST00000581525 HCG22E2RYF7 251 aa6.23□□□□□ -1.41
SNORD55-201ENST00000581525 ACYP1P07311 99 aa6.23□□□□□ -1.41
SNORD55-201ENST00000581525 ANAPC13Q9BS18 74 aa6.23□□□□□ -1.41
SNORD55-201ENST00000581525 FAM240AA0A1B0GVK7 77 aa6.22□□□□□ -1.41
SNORD55-201ENST00000581525 NDUFS5O43920 106 aa6.22□□□□□ -1.41
SNORD55-201ENST00000581525 RPS28P62857 69 aaKnown RBP6.22□□□□□ -1.41
SNORD55-201ENST00000581525 SEC61GP60059 68 aa6.21□□□□□ -1.42
SNORD55-201ENST00000581525 C7orf65Q6ZTY9 151 aa6.17□□□□□ -1.42
SNORD55-201ENST00000581525 KRTAP9-6A0A140TA67 174 aa6.16□□□□□ -1.42
SNORD55-201ENST00000581525 TP53AIP1Q9HCN2 124 aa6.15□□□□□ -1.42
SNORD55-201ENST00000581525 MT2AP02795 61 aa6.14□□□□□ -1.43
SNORD55-201ENST00000581525 V9GYY9 64 aa6.13□□□□□ -1.43
SNORD55-201ENST00000581525 IGKV2D-30A0A075B6S6 120 aa6.12□□□□□ -1.43
SNORD55-201ENST00000581525 IGKV2-30P06310 120 aa6.12□□□□□ -1.43
SNORD55-201ENST00000581525 H1FX-AS1Q4G0G2 97 aa6.12□□□□□ -1.43
SNORD55-201ENST00000581525 ATP5EP2Q5VTU8 51 aa6.12□□□□□ -1.43
SNORD55-201ENST00000581525 CRCT1Q9UGL9 99 aa6.11□□□□□ -1.43
SNORD55-201ENST00000581525 PRO0628Q9UI54 55 aa6.09□□□□□ -1.43
SNORD55-201ENST00000581525 MT1FP04733 61 aa6.08□□□□□ -1.44
SNORD55-201ENST00000581525 LINC00643Q86TS7 51 aa6.07□□□□□ -1.44
SNORD55-201ENST00000581525 KRTAP9-3Q9BYQ3 159 aa6.07□□□□□ -1.44
SNORD55-201ENST00000581525 KRTAP3-1Q9BYR8 98 aa6.05□□□□□ -1.44
SNORD55-201ENST00000581525 C4orf26Q17RF5 130 aa6.04□□□□□ -1.44
SNORD55-201ENST00000581525 FSIP2Q5CZC0 6907 aa6.02□□□□□ -1.45
SNORD55-201ENST00000581525 KRTAP10-10P60014 251 aa6.02□□□□□ -1.45
SNORD55-201ENST00000581525 USH2AO75445 5202 aa6.01□□□□□ -1.45
SNORD55-201ENST00000581525 CYP4F30PQ9H0H9 118 aa6.01□□□□□ -1.45
SNORD55-201ENST00000581525 TRAV22A0A0B4J277 110 aa5.99□□□□□ -1.45
SNORD55-201ENST00000581525 HIST1H4AP62805 103 aaKnown RBP5.99□□□□□ -1.45
SNORD55-201ENST00000581525 LCE2BO14633 110 aa5.98□□□□□ -1.45
SNORD55-201ENST00000581525 UQCRQO14949 82 aa5.98□□□□□ -1.45
SNORD55-201ENST00000581525 C1orf64Q8NEQ6 169 aa5.97□□□□□ -1.45
SNORD55-201ENST00000581525 IMUPQ9GZP8 106 aa5.97□□□□□ -1.45
SNORD55-201ENST00000581525 A0A087WVE0 104 aa5.96□□□□□ -1.46
SNORD55-201ENST00000581525 LOC101927531A0A1B0GV80 90 aa5.96□□□□□ -1.46
SNORD55-201ENST00000581525 CCDC179H3BU77 68 aa5.96□□□□□ -1.46
SNORD55-201ENST00000581525 MT-ATP8P03928 68 aa5.95□□□□□ -1.46
SNORD55-201ENST00000581525 SSPOA2VEC9 5147 aa5.94□□□□□ -1.46
SNORD55-201ENST00000581525 ATOX1O00244 68 aa5.93□□□□□ -1.46
SNORD55-201ENST00000581525 TMEM258P61165 79 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms